| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g31003 | 1:30,862,727-30,864,175 | + | C2H1g17151 | CX1g004658 | LOC_Os01g59990 | Os01g0815800 | - | Detail |
| C1H1g02777 | 1:30,865,159-30,868,765 | - | C2H1g11561 | CX1g001519 | LOC_Os01g60000 | Os01g0815900 | - | Detail |
| C1H1g09791 | 1:30,869,157-30,870,725 | + | C2H1g13748 | CX1g001573 | LOC_Os01g60010 | Os01g0816000 | - | Detail |
| C1H1g00772 | 1:30,872,324-30,873,477 | - | C2H1g09624 | CX1g005248 | LOC_Os01g60020 | Os01g0816100 | OsNAC4 | Detail |
| C1H1g28423 | 1:30,876,795-30,877,082 | + | - | - | - | - | - | Detail |
| C1H1g15712 | 1:30,885,496-30,901,935 | - | C2H1g09286 | CX1g002744 | LOC_Os01g60040 | Os01g0816400 | - | Detail |
| C1H1g15897 | 1:30,910,322-30,914,693 | - | C2H1g26961 | CX1g002744 | LOC_Os01g60050 | Os01g0816500 | - | Detail |
| C1H1g04794 | 1:30,917,388-30,922,442 | + | C2H1g04146 | CX1g001742 | LOC_Os01g60060 | Os01g0816600 | - | Detail |
| C1H1g24642 | 1:30,925,590-30,927,056 | + | C2H1g24791 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C1H1g24879 | 1:30,927,149-30,927,451 | + | C2H1g25178 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C1H1g23182 | 1:30,932,403-30,935,578 | - | C2H1g12383 | CX1g001408 | LOC_Os01g60110 | Os01g0817000 | - | Detail |
| C1H1g20937 | 1:30,938,410-30,941,850 | - | C2H1g27536 | CX1g001908 | LOC_Os01g60120 | Os01g0817100 | - | Detail |
| C1H1g16273 | 1:30,946,537-30,949,653 | + | C2H1g05301 | CX1g005873 | LOC_Os01g60140 | Os01g0817400 | - | Detail |
| C1H1g27130 | 1:30,950,380-30,950,676 | + | - | CX1g006550 | - | - | - | Detail |
| C1H1g15906 | 1:30,951,096-30,951,678 | - | C2H1g04044 | CX1g004355 | - | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| C1H1g18287 | 1:30,959,654-30,960,304 | + | C2H1g27953 | CX1g005753 | LOC_Os01g60170 | Os01g0817650 | - | Detail |
| C1H1g14583 | 1:30,963,679-30,967,446 | + | C2H1g17170 | CX1g000357 | LOC_Os01g60190 | Os01g0817700 | - | Detail |
| C1H1g28961 | 1:30,967,898-30,971,189 | - | C2H1g22450 | CX1g003723 | LOC_Os01g60200 | Os01g0817800 | - | Detail |
| C1H1g28985 | 1:30,983,428-30,987,645 | + | C2H1g03576 | CX1g005948 | LOC_Os01g60230 | Os01g0818000 | - | Detail |
| C1H1g10378 | 1:30,991,363-30,992,829 | + | C2H1g16399 | CX1g005236 | - | Os01g0818100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g29666 | 4:20,066,309-20,067,316 | - | C1H4g19360 | CX4g035580 | LOC_Os04g39100 | Os04g0465100 | - | Detail |
| C2H4g09735 | 4:20,069,573-20,069,974 | - | - | CX4g036591 | - | - | - | Detail |
| C2H4g19933 | 4:20,080,102-20,080,645 | - | C1H4g22908 | CX4g036602 | LOC_Os04g39110 | Os04g0465300 | GASR2, OsGASR2 | Detail |
| C2H4g08157 | 4:20,087,000-20,089,489 | + | C1H4g23208 | CX4g032042 | LOC_Os04g39130 | Os04g0465432 | - | Detail |
| C2H4g13916 | 4:20,089,946-20,091,567 | - | C1H4g20155 | CX4g034470 | LOC_Os04g39140 | Os04g0465500 | - | Detail |
| C2H4g18235 | 4:20,093,110-20,093,788 | + | C1H4g19202 | CX4g035849 | LOC_Os04g39150 | Os04g0465600 | OsMLP423 | Detail |
| C2H4g13664 | 4:20,095,186-20,100,592 | + | C1H4g22593 | CX4g033981 | LOC_Os04g39160 | Os04g0465700 | OsRDR2, FEM1 | Detail |
| C2H4g05826 | 4:20,101,887-20,103,660 | + | C1H4g27473 | CX4g033685 | LOC_Os04g39170 | Os04g0465800 | - | Detail |
| C2H4g07790 | 4:20,104,317-20,105,895 | - | C1H4g15375 | CX4g033509 | LOC_Os04g39180 | Os04g0465900 | OsARK2 | Detail |
| C2H4g18940 | 4:20,112,023-20,112,259 | + | - | CX4g032468 | - | Os04g0466000 | - | Detail |
| C2H4g05821 | 4:20,119,194-20,122,279 | - | C1H4g10317 | CX4g036412 | LOC_Os04g39190 | Os04g0466100 | - | Detail |
| C2H4g04162 | 4:20,136,707-20,139,911 | + | C1H4g15967 | CX4g035488 | LOC_Os04g39210 | Os04g0466600 | - | Detail |
| C2H4g02293 | 4:20,140,356-20,149,248 | - | C1H4g23954 | CX4g033308 | LOC_Os04g39220 | Os04g0466700 | - | Detail |
| C2H4g08624 | 4:20,151,899-20,152,454 | + | C1H4g26968 | CX4g033180 | LOC_Os04g39230 | Os04g0467000 | - | Detail |
| C2H4g13693 | 4:20,152,936-20,158,756 | - | C1H4g20963 | CX4g031432 | LOC_Os04g39240 | Os04g0467100 | - | Detail |
| C2H4g06059 | 4:20,174,411-20,177,455 | - | - | CX4g035463 | LOC_Os04g39250 | Os04g0467300 | - | Detail |
| C2H4g09111 | 4:20,178,400-20,183,180 | - | C1H4g31113 | CX4g033763 | LOC_Os04g39260 | Os04g0467400 | - | Detail |
| C2H4g05588 | 4:20,183,652-20,186,902 | - | C1H4g30490 | CX4g035308 | LOC_Os04g39270 | Os04g0467700 | - | Detail |
| C2H4g22782 | 4:20,188,417-20,192,849 | - | C1H4g19832 | CX4g032151 | LOC_Os04g39280 | Os04g0467800 | - | Detail |
| C2H4g10668 | 4:20,193,107-20,199,849 | - | C1H4g15083 | CX4g035147 | LOC_Os04g53760 | Os04g0467901 | OsKCH2 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |