| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g31003 | 1:30,862,727-30,864,175 | + | C2H1g17151 | CX1g004658 | LOC_Os01g59990 | Os01g0815800 | - | Detail |
| C1H1g02777 | 1:30,865,159-30,868,765 | - | C2H1g11561 | CX1g001519 | LOC_Os01g60000 | Os01g0815900 | - | Detail |
| C1H1g09791 | 1:30,869,157-30,870,725 | + | C2H1g13748 | CX1g001573 | LOC_Os01g60010 | Os01g0816000 | - | Detail |
| C1H1g00772 | 1:30,872,324-30,873,477 | - | C2H1g09624 | CX1g005248 | LOC_Os01g60020 | Os01g0816100 | OsNAC4 | Detail |
| C1H1g28423 | 1:30,876,795-30,877,082 | + | - | - | - | - | - | Detail |
| C1H1g15712 | 1:30,885,496-30,901,935 | - | C2H1g09286 | CX1g002744 | LOC_Os01g60040 | Os01g0816400 | - | Detail |
| C1H1g15897 | 1:30,910,322-30,914,693 | - | C2H1g26961 | CX1g002744 | LOC_Os01g60050 | Os01g0816500 | - | Detail |
| C1H1g04794 | 1:30,917,388-30,922,442 | + | C2H1g04146 | CX1g001742 | LOC_Os01g60060 | Os01g0816600 | - | Detail |
| C1H1g24642 | 1:30,925,590-30,927,056 | + | C2H1g24791 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C1H1g24879 | 1:30,927,149-30,927,451 | + | C2H1g25178 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C1H1g23182 | 1:30,932,403-30,935,578 | - | C2H1g12383 | CX1g001408 | LOC_Os01g60110 | Os01g0817000 | - | Detail |
| C1H1g20937 | 1:30,938,410-30,941,850 | - | C2H1g27536 | CX1g001908 | LOC_Os01g60120 | Os01g0817100 | - | Detail |
| C1H1g16273 | 1:30,946,537-30,949,653 | + | C2H1g05301 | CX1g005873 | LOC_Os01g60140 | Os01g0817400 | - | Detail |
| C1H1g27130 | 1:30,950,380-30,950,676 | + | - | CX1g006550 | - | - | - | Detail |
| C1H1g15906 | 1:30,951,096-30,951,678 | - | C2H1g04044 | CX1g004355 | - | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| C1H1g18287 | 1:30,959,654-30,960,304 | + | C2H1g27953 | CX1g005753 | LOC_Os01g60170 | Os01g0817650 | - | Detail |
| C1H1g14583 | 1:30,963,679-30,967,446 | + | C2H1g17170 | CX1g000357 | LOC_Os01g60190 | Os01g0817700 | - | Detail |
| C1H1g28961 | 1:30,967,898-30,971,189 | - | C2H1g22450 | CX1g003723 | LOC_Os01g60200 | Os01g0817800 | - | Detail |
| C1H1g28985 | 1:30,983,428-30,987,645 | + | C2H1g03576 | CX1g005948 | LOC_Os01g60230 | Os01g0818000 | - | Detail |
| C1H1g10378 | 1:30,991,363-30,992,829 | + | C2H1g16399 | CX1g005236 | - | Os01g0818100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g19111 | 7:21,432,634-21,436,223 | - | C1H7g14573 | CX7g048118 | LOC_Os07g43570 | Os07g0628900 | - | Detail |
| C2H7g27928 | 7:21,447,632-21,448,735 | - | C1H7g25846 | CX7g050220 | LOC_Os07g43580 | Os07g0629000 | Os2R_MYB72 | Detail |
| C2H7g24109 | 7:21,482,810-21,484,812 | + | C1H7g21929 | - | LOC_Os07g43600 | Os07g0629300 | - | Detail |
| C2H7g03330 | 7:21,503,635-21,504,756 | + | C1H7g19923 | - | LOC_Os07g43670 | Os07g0630400 | OsRNS1 | Detail |
| C2H7g10968 | 7:21,507,242-21,510,431 | + | C1H7g21124 | CX7g049009 | LOC_Os07g43690 | - | - | Detail |
| C2H7g25111 | 7:21,512,699-21,515,398 | - | C1H7g31097 | CX7g046920 | LOC_Os07g43700 | Os07g0630800 | - | Detail |
| C2H7g29635 | 7:21,517,009-21,521,913 | + | C1H7g27167 | CX7g048989 | LOC_Os07g43710 | Os07g0630900 | OsCSLA7 | Detail |
| C2H7g12234 | 7:21,522,262-21,526,636 | - | C1H7g28210 | CX7g048291 | LOC_Os07g43720 | Os07g0631000 | - | Detail |
| C2H7g16897 | 7:21,528,537-21,529,002 | - | C1H7g14340 | - | - | Os07g0631050 | - | Detail |
| C2H7g27405 | 7:21,529,846-21,530,831 | + | C1H7g05679 | CX7g049774 | LOC_Os07g43730 | Os07g0631100 | - | Detail |
| C2H7g02447 | 7:21,536,405-21,537,960 | - | C1H7g10515 | CX7g047408 | LOC_Os07g43770 | Os07g0631300 | - | Detail |
| C2H7g05504 | 7:21,546,915-21,548,818 | + | C1H7g01790 | CX7g047071 | LOC_Os07g43810 | Os07g0631900 | - | Detail |
| C2H7g10915 | 7:21,549,920-21,550,864 | + | C1H7g30096 | CX7g048081 | LOC_Os07g43820 | Os07g0632000 | - | Detail |
| C2H7g14759 | 7:21,552,288-21,553,678 | - | C1H7g08155 | CX7g049226 | LOC_Os07g43830 | - | - | Detail |
| C2H7g06962 | 7:21,554,973-21,555,847 | - | C1H7g14732 | CX7g049226 | LOC_Os07g43840 | - | - | Detail |
| C2H7g21863 | 7:21,559,016-21,560,286 | - | C1H7g21469 | CX7g049051 | LOC_Os07g43850 | - | - | Detail |
| C2H7g29607 | 7:21,560,769-21,561,190 | + | - | CX7g049308 | LOC_Os07g43860 | - | - | Detail |
| C2H7g12270 | 7:21,563,501-21,572,926 | + | C1H7g06835 | CX7g047660 | LOC_Os07g43870 | Os07g0632600 | - | Detail |
| C2H7g26638 | 7:21,574,043-21,576,514 | + | C1H7g05575 | CX7g048920 | LOC_Os07g43890 | Os07g0632700 | - | Detail |
| C2H7g23084 | 7:21,577,216-21,582,170 | - | C1H7g26390 | CX7g046694 | LOC_Os07g43900 | Os07g0632800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |