| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g31003 | 1:30,862,727-30,864,175 | + | C2H1g17151 | CX1g004658 | LOC_Os01g59990 | Os01g0815800 | - | Detail |
| C1H1g02777 | 1:30,865,159-30,868,765 | - | C2H1g11561 | CX1g001519 | LOC_Os01g60000 | Os01g0815900 | - | Detail |
| C1H1g09791 | 1:30,869,157-30,870,725 | + | C2H1g13748 | CX1g001573 | LOC_Os01g60010 | Os01g0816000 | - | Detail |
| C1H1g00772 | 1:30,872,324-30,873,477 | - | C2H1g09624 | CX1g005248 | LOC_Os01g60020 | Os01g0816100 | OsNAC4 | Detail |
| C1H1g28423 | 1:30,876,795-30,877,082 | + | - | - | - | - | - | Detail |
| C1H1g15712 | 1:30,885,496-30,901,935 | - | C2H1g09286 | CX1g002744 | LOC_Os01g60040 | Os01g0816400 | - | Detail |
| C1H1g15897 | 1:30,910,322-30,914,693 | - | C2H1g26961 | CX1g002744 | LOC_Os01g60050 | Os01g0816500 | - | Detail |
| C1H1g04794 | 1:30,917,388-30,922,442 | + | C2H1g04146 | CX1g001742 | LOC_Os01g60060 | Os01g0816600 | - | Detail |
| C1H1g24642 | 1:30,925,590-30,927,056 | + | C2H1g24791 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C1H1g24879 | 1:30,927,149-30,927,451 | + | C2H1g25178 | CX1g006929 | LOC_Os01g60080 | Os01g0816700 | - | Detail |
| C1H1g23182 | 1:30,932,403-30,935,578 | - | C2H1g12383 | CX1g001408 | LOC_Os01g60110 | Os01g0817000 | - | Detail |
| C1H1g20937 | 1:30,938,410-30,941,850 | - | C2H1g27536 | CX1g001908 | LOC_Os01g60120 | Os01g0817100 | - | Detail |
| C1H1g16273 | 1:30,946,537-30,949,653 | + | C2H1g05301 | CX1g005873 | LOC_Os01g60140 | Os01g0817400 | - | Detail |
| C1H1g27130 | 1:30,950,380-30,950,676 | + | - | CX1g006550 | - | - | - | Detail |
| C1H1g15906 | 1:30,951,096-30,951,678 | - | C2H1g04044 | CX1g004355 | - | Os01g0286100 | PIL15, OsPIL15, OsbHLH105 | Detail |
| C1H1g18287 | 1:30,959,654-30,960,304 | + | C2H1g27953 | CX1g005753 | LOC_Os01g60170 | Os01g0817650 | - | Detail |
| C1H1g14583 | 1:30,963,679-30,967,446 | + | C2H1g17170 | CX1g000357 | LOC_Os01g60190 | Os01g0817700 | - | Detail |
| C1H1g28961 | 1:30,967,898-30,971,189 | - | C2H1g22450 | CX1g003723 | LOC_Os01g60200 | Os01g0817800 | - | Detail |
| C1H1g28985 | 1:30,983,428-30,987,645 | + | C2H1g03576 | CX1g005948 | LOC_Os01g60230 | Os01g0818000 | - | Detail |
| C1H1g10378 | 1:30,991,363-30,992,829 | + | C2H1g16399 | CX1g005236 | - | Os01g0818100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g18425 | 6:8,526,785-8,531,914 | + | C1H6g04470 | - | - | - | - | Detail |
| C2H6g18277 | 6:8,532,811-8,533,137 | - | - | - | - | - | - | Detail |
| C2H6g12326 | 6:8,537,795-8,539,322 | - | - | - | - | - | - | Detail |
| C2H6g28723 | 6:8,542,181-8,543,110 | - | C1H6g06641 | CX6g043385 | LOC_Os06g17580 | Os06g0297400 | - | Detail |
| C2H6g01452 | 6:8,547,845-8,549,056 | - | C1H6g30430 | CX6g043385 | LOC_Os06g17600 | Os06g0297400 | - | Detail |
| C2H6g23065 | 6:8,557,246-8,557,494 | + | - | - | - | - | - | Detail |
| C2H6g13570 | 6:8,559,939-8,560,979 | - | - | - | - | - | - | Detail |
| C2H6g11369 | 6:8,567,450-8,568,404 | - | C1H6g13769 | CX6g043385 | LOC_Os06g17700 | Os06g0286146 | - | Detail |
| C2H6g07014 | 6:8,574,544-8,575,325 | + | C1H6g22294 | CX6g043928 | LOC_Os06g17730 | Os06g0286228 | - | Detail |
| C2H6g18399 | 6:8,576,458-8,578,448 | + | C1H6g09624 | CX6g042477 | LOC_Os06g17830 | Os06g0286310 | - | Detail |
| C2H6g11412 | 6:8,579,491-8,593,767 | - | C1H6g16041 | CX6g042149 | LOC_Os06g17840 | Os06g0286351 | - | Detail |
| C2H6g07583 | 6:8,622,194-8,623,317 | + | C1H6g09198 | CX6g042506 | LOC_Os06g17870 | Os06g0286375 | - | Detail |
| C2H6g22222 | 6:8,623,877-8,628,400 | + | C1H6g08489 | CX6g042775 | LOC_Os06g17880 | Os06g0286500 | - | Detail |
| C2H6g25861 | 6:8,642,156-8,643,310 | + | C1H6g24842 | - | LOC_Os06g17890 | Os06g0287700 | - | Detail |
| C2H6g20199 | 6:8,647,909-8,650,698 | + | C1H6g24842 | CX6g042775 | LOC_Os06g17900 | Os06g0287000 | - | Detail |
| C2H6g07261 | 6:8,654,378-8,661,505 | + | C1H6g07298 | CX6g042775 | LOC_Os06g17970 | Os06g0287700 | - | Detail |
| C2H6g15983 | 6:8,668,399-8,668,898 | - | - | CX6g043453 | - | - | - | Detail |
| C2H6g07949 | 6:8,673,058-8,677,535 | + | C1H6g24842 | CX6g042775 | LOC_Os06g17880 | Os06g0286500 | - | Detail |
| C2H6g12019 | 6:8,678,986-8,679,501 | + | C1H6g24842 | CX6g045545 | LOC_Os06g17930 | Os06g0287200 | - | Detail |
| C2H6g26841 | 6:8,680,200-8,687,208 | + | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |