| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g02735 | 9:17,855,719-17,857,236 | + | C2H9g20569 | CX9g058033 | LOC_Os09g36990 | Os09g0541700 | - | Detail |
| C1H9g18787 | 9:17,857,700-17,861,142 | - | C2H9g19893 | CX9g055298 | LOC_Os09g37000 | Os09g0541900 | - | Detail |
| C1H9g03436 | 9:17,863,151-17,866,167 | - | C2H9g10407 | CX9g056735 | LOC_Os09g37006 | Os09g0542000 | - | Detail |
| C1H9g18054 | 9:17,867,010-17,870,638 | - | C2H9g23287 | CX9g058088 | LOC_Os09g37012 | Os09g0542100 | - | Detail |
| C1H9g17541 | 9:17,874,953-17,877,285 | - | C2H9g00368 | CX9g055142 | LOC_Os09g37020 | Os09g0542200 | - | Detail |
| C1H9g09227 | 9:17,885,869-17,889,526 | + | C2H9g15798 | CX9g057132 | LOC_Os09g37040 | Os09g0542500 | - | Detail |
| C1H9g10374 | 9:17,890,331-17,891,790 | - | C2H9g05399 | CX9g057153 | LOC_Os09g37050 | Os09g0542600 | - | Detail |
| C1H9g10542 | 9:17,895,467-17,897,995 | - | C2H9g07462 | CX9g057571 | LOC_Os09g37060 | Os09g0542700 | - | Detail |
| C1H9g20729 | 9:17,899,088-17,902,834 | - | C2H9g24102 | CX9g054989 | LOC_Os09g37070 | Os09g0542800 | - | Detail |
| C1H9g19954 | 9:17,905,839-17,906,609 | + | - | CX9g055138 | LOC_Os09g37080 | Os09g0542900 | - | Detail |
| C1H9g02114 | 9:17,911,688-17,917,748 | + | C2H9g30539 | CX9g055681 | LOC_Os09g37100 | Os09g0543100 | - | Detail |
| C1H9g01301 | 9:17,929,348-17,930,598 | - | - | CX9g058027 | LOC_Os09g37120 | Os09g0543400 | ODC1 | Detail |
| C1H9g14882 | 9:17,951,080-17,952,387 | + | C2H9g20419 | CX9g056310 | LOC_Os09g37180 | Os09g0543900 | - | Detail |
| C1H9g22634 | 9:17,960,521-17,961,882 | + | C2H9g04352 | CX9g056534 | LOC_Os09g37200 | Os09g0544000 | OsPHT4 | Detail |
| C1H9g07690 | 9:17,972,757-17,979,912 | + | C2H9g00928 | CX9g057415 | LOC_Os09g37230 | Os09g0544300 | - | Detail |
| C1H9g17505 | 9:17,981,171-18,003,962 | + | C2H9g30661 | CX9g057924 | LOC_Os09g37240 | Os09g0544400 | - | Detail |
| C1H9g29018 | 9:18,004,681-18,006,475 | - | C2H9g00491 | CX9g057891 | LOC_Os09g37250 | - | - | Detail |
| C1H9g19143 | 9:18,009,426-18,010,320 | - | C2H9g14558 | CX9g057635 | LOC_Os09g37260 | Os09g0544700 | - | Detail |
| C1H9g28030 | 9:18,010,756-18,014,546 | - | C2H9g28839 | CX9g057831 | LOC_Os09g37270 | Os09g0544800 | Os RopGEF7, OsRopGEF7, OsRacGEF2 | Detail |
| C1H9g26500 | 9:18,023,011-18,027,622 | - | C2H9g10418 | CX9g056668 | LOC_Os09g37280 | Os09g0544900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g08986 | 3:31,065,678-31,067,028 | + | C1H3g09793 | CX3g027906 | LOC_Os03g59670 | Os03g0811400 | - | Detail |
| C2H3g03566 | 3:31,078,144-31,081,813 | - | C1H3g28609 | CX3g026137 | LOC_Os03g59680 | Os03g0811500 | - | Detail |
| C2H3g09547 | 3:31,083,437-31,084,402 | - | C1H3g20712 | CX3g028706 | LOC_Os03g59690 | Os03g0811550 | - | Detail |
| C2H3g28941 | 3:31,084,787-31,087,804 | - | C1H3g19969 | CX3g027737 | LOC_Os03g59700 | Os03g0811600 | - | Detail |
| C2H3g05006 | 3:31,090,307-31,091,349 | - | C1H3g19079 | CX3g025408 | LOC_Os03g59720 | Os03g0811800 | - | Detail |
| C2H3g19593 | 3:31,099,329-31,113,075 | - | C1H3g19228 | CX3g028422 | - | Os03g0812000 | - | Detail |
| C2H3g16505 | 3:31,118,922-31,121,226 | + | C1H3g24075 | CX3g025855 | LOC_Os03g59760 | Os03g0812200 | - | Detail |
| C2H3g07257 | 3:31,130,197-31,130,787 | + | C1H3g03324 | CX3g026231 | LOC_Os03g59790 | Os03g0812800 | OsEFH1 | Detail |
| C2H3g14485 | 3:31,131,619-31,133,439 | + | C1H3g03324 | CX3g026231 | LOC_Os03g59790 | Os03g0812800 | OsEFH1 | Detail |
| C2H3g21102 | 3:31,137,403-31,138,940 | - | C1H3g23671 | CX3g025448 | LOC_Os03g59840 | - | - | Detail |
| C2H3g09561 | 3:31,140,041-31,141,828 | - | C1H3g23671 | CX3g025448 | LOC_Os03g59840 | Os03g0813200 | - | Detail |
| C2H3g11227 | 3:31,155,869-31,157,241 | + | C1H3g23594 | CX3g030353 | LOC_Os03g60080 | Os03g0815100 | OsNAC19, SNAC1 | Detail |
| C2H3g24873 | 3:31,157,868-31,164,045 | - | C1H3g00328 | CX3g029581 | LOC_Os03g60090 | Os03g0815200 | - | Detail |
| C2H3g26221 | 3:31,165,040-31,165,405 | - | C1H3g20553 | - | - | Os03g0815332 | - | Detail |
| C2H3g04086 | 3:31,165,074-31,166,415 | + | C1H3g20794 | CX3g025237 | LOC_Os03g60100 | Os03g0815400 | - | Detail |
| C2H3g14885 | 3:31,172,880-31,176,532 | + | C1H3g22427 | CX3g029363 | LOC_Os03g60110 | Os03g0815700 | Spin1, SPIN1 | Detail |
| C2H3g05216 | 3:31,179,048-31,179,794 | - | C1H3g09437 | CX3g030003 | LOC_Os03g60120 | Os03g0815800 | - | Detail |
| C2H3g17896 | 3:31,181,760-31,184,493 | - | C1H3g16381 | CX3g030342 | LOC_Os03g60130 | Os03g0815900 | - | Detail |
| C2H3g03956 | 3:31,187,533-31,188,743 | - | C1H3g12909 | CX3g025316 | LOC_Os03g60140 | Os03g0816000 | - | Detail |
| C2H3g17236 | 3:31,189,389-31,193,270 | - | - | - | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |