| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g23828 | 9:17,601,765-17,603,518 | + | C2H9g01597 | CX9g055542 | LOC_Os09g36560 | Os09g0536300 | - | Detail |
| C1H9g17095 | 9:17,614,642-17,616,771 | + | C2H9g27916 | CX9g056300 | LOC_Os09g36580 | Os09g0536400 | - | Detail |
| C1H9g11028 | 9:17,623,463-17,626,847 | - | C2H9g02676 | CX9g057416 | LOC_Os09g36600 | Os09g0536700 | - | Detail |
| C1H9g01000 | 9:17,636,599-17,637,545 | - | - | CX9g056883 | LOC_Os09g36619 | Os09g0537000 | - | Detail |
| C1H9g09511 | 9:17,636,612-17,637,136 | + | - | - | - | Os09g0537100 | - | Detail |
| C1H9g00250 | 9:17,638,382-17,640,142 | + | - | CX9g055394 | LOC_Os09g36630 | Os09g0537200 | - | Detail |
| C1H9g06888 | 9:17,640,701-17,643,243 | + | C2H9g02330 | CX9g057733 | LOC_Os09g36670 | Os09g0537600 | - | Detail |
| C1H9g24907 | 9:17,662,091-17,664,927 | + | C2H9g02330 | CX9g057665 | LOC_Os09g36670 | Os09g0537600 | - | Detail |
| C1H9g14336 | 9:17,666,133-17,668,101 | - | C2H9g11788 | CX9g057345 | LOC_Os09g36680 | Os09g0537700 | RNS4, OsRNS4, OsRRP, RNaseDIS | Detail |
| C1H9g12593 | 9:17,674,761-17,677,136 | - | C2H9g24881 | CX9g055095 | LOC_Os09g36700 | Os09g0538000 | - | Detail |
| C1H9g12194 | 9:17,680,020-17,682,051 | + | C2H9g25356 | CX9g057133 | LOC_Os09g36710 | Os09g0538200 | - | Detail |
| C1H9g18306 | 9:17,696,022-17,696,291 | + | - | CX9g055094 | LOC_Os09g32790 | - | - | Detail |
| C1H9g31616 | 9:17,696,176-17,702,664 | - | C2H9g21190 | CX9g055320 | LOC_Os09g32780 | - | - | Detail |
| C1H9g10922 | 9:17,704,873-17,710,590 | + | C2H9g21190 | CX9g055320 | LOC_Os09g32780 | - | - | Detail |
| C1H9g31173 | 9:17,713,997-17,715,178 | - | C2H9g08114 | CX9g055420 | LOC_Os09g36730 | Os09g0538400 | OsMYB108 | Detail |
| C1H9g22212 | 9:17,721,514-17,722,139 | - | C2H9g01669 | CX9g056101 | LOC_Os09g36735 | Os09g0538450 | - | Detail |
| C1H9g15664 | 9:17,722,322-17,724,204 | + | C2H9g03742 | CX9g057786 | LOC_Os09g36740 | Os09g0538500 | MS5 | Detail |
| C1H9g23441 | 9:17,724,689-17,728,882 | - | C2H9g08362 | CX9g056628 | LOC_Os09g36750 | Os09g0538600 | APX9 | Detail |
| C1H9g06898 | 9:17,732,438-17,733,379 | + | C2H9g06001 | CX9g055639 | LOC_Os09g36760 | Os09g0538700 | - | Detail |
| C1H9g29591 | 9:17,733,417-17,736,357 | + | C2H9g27815 | CX9g055639 | LOC_Os09g36760 | Os09g0538700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g07127 | 1:24,972,355-24,977,520 | + | C1H1g07251 | CX1g001461 | LOC_Os01g48900 | Os01g0681100 | - | Detail |
| C2H1g13127 | 1:24,978,962-24,984,114 | - | C1H1g21340 | CX1g007055 | LOC_Os01g48910 | Os01g0681200 | - | Detail |
| C2H1g29187 | 1:24,987,454-24,992,790 | - | C1H1g18369 | CX1g000478 | LOC_Os01g48920 | Os01g0681400 | ATG6A, OsATG6a | Detail |
| C2H1g15446 | 1:24,992,859-24,995,762 | + | C1H1g01190 | CX1g006805 | LOC_Os01g48930 | Os01g0681600 | - | Detail |
| C2H1g14692 | 1:25,005,253-25,017,023 | - | C1H1g12744 | CX1g000610 | LOC_Os01g48960 | Os01g0681900 | OsGOGAT1, NADH-GOGAT1 | Detail |
| C2H1g11093 | 1:25,032,090-25,036,165 | - | C1H1g07001 | CX1g000049 | LOC_Os01g48980 | Os01g0682200 | - | Detail |
| C2H1g19818 | 1:25,038,330-25,042,038 | + | C1H1g06026 | CX1g000149 | LOC_Os01g48990 | Os01g0682500 | - | Detail |
| C2H1g30064 | 1:25,042,425-25,048,414 | + | C1H1g18921 | CX1g000149 | LOC_Os01g49000 | Os01g0683100 | - | Detail |
| C2H1g03389 | 1:25,066,487-25,070,291 | + | C1H1g07773 | - | LOC_Os01g49010 | Os01g0683400 | OsORC4 | Detail |
| C2H1g19532 | 1:25,071,991-25,077,582 | - | C1H1g21597 | CX5g038117 | LOC_Os01g49024 | Os01g0683550 | - | Detail |
| C2H1g08995 | 1:25,078,940-25,080,482 | + | C1H1g21001 | CX1g002822 | LOC_Os01g49026 | Os01g0683600 | - | Detail |
| C2H1g03855 | 1:25,082,157-25,083,026 | + | C1H1g08336 | CX1g003922 | LOC_Os01g49030 | Os01g0683700 | - | Detail |
| C2H1g15370 | 1:25,126,110-25,129,635 | + | C1H1g07796 | CX1g000472 | LOC_Os01g49060 | Os01g0684800 | - | Detail |
| C2H1g12213 | 1:25,130,100-25,133,076 | - | C1H1g29982 | CX1g001799 | LOC_Os01g49120 | Os01g0684900 | - | Detail |
| C2H1g09209 | 1:25,137,634-25,141,087 | - | C1H1g11448 | CX1g003730 | LOC_Os01g49150 | Os01g0685200 | - | Detail |
| C2H1g29921 | 1:25,144,672-25,146,283 | + | C1H1g30171 | CX1g007197 | LOC_Os01g49160 | Os01g0685400 | RGN1 | Detail |
| C2H1g15034 | 1:25,156,413-25,167,727 | - | C1H1g13712 | CX1g004222 | LOC_Os01g49180 | Os01g0685500 | - | Detail |
| C2H1g05241 | 1:25,172,390-25,176,705 | + | C1H1g18062 | CX1g004551 | LOC_Os01g49190 | Os01g0685800 | - | Detail |
| C2H1g18560 | 1:25,177,765-25,182,302 | + | C1H1g18271 | CX1g003807 | LOC_Os01g49200 | Os01g0685900 | - | Detail |
| C2H1g28047 | 1:25,191,916-25,193,283 | + | C1H1g07342 | CX1g002173 | LOC_Os01g49230 | Os01g0686200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |