| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g19525 | 9:17,293,450-17,296,347 | - | C2H9g23489 | CX9g056579 | LOC_Os09g36000 | Os09g0529400 | - | Detail |
| C1H9g27128 | 9:17,296,729-17,300,315 | - | C2H9g27445 | CX9g056877 | LOC_Os09g36020 | Os09g0529700 | OsVPS22 | Detail |
| C1H9g05809 | 9:17,302,119-17,305,961 | + | C2H9g23825 | CX9g055906 | LOC_Os09g36030 | Os09g0529900 | - | Detail |
| C1H9g07466 | 9:17,314,019-17,317,379 | + | C2H9g28583 | CX9g056800 | LOC_Os09g36060 | Os09g0530200 | - | Detail |
| C1H9g12433 | 9:17,317,842-17,320,920 | + | C2H9g03363 | CX9g057922 | LOC_Os09g36070 | Os09g0530275 | - | Detail |
| C1H9g17904 | 9:17,328,162-17,329,786 | + | C2H9g23341 | CX9g056469 | LOC_Os09g36080 | Os09g0530300 | - | Detail |
| C1H9g17327 | 9:17,331,611-17,340,241 | + | C2H9g22638 | CX9g057701 | LOC_Os09g36090 | Os09g0530500 | - | Detail |
| C1H9g09404 | 9:17,341,020-17,343,279 | + | C2H9g01014 | CX9g055918 | LOC_Os09g36100 | Os09g0530700 | - | Detail |
| C1H9g23871 | 9:17,349,163-17,352,477 | + | C2H9g12131 | CX9g055471 | LOC_Os09g36110 | Os09g0530800 | - | Detail |
| C1H9g24630 | 9:17,354,412-17,357,616 | - | C2H9g01895 | CX9g057214 | LOC_Os09g36130 | Os09g0531100 | - | Detail |
| C1H9g07449 | 9:17,383,057-17,384,092 | - | C2H9g23806 | CX9g057463 | LOC_Os09g36160 | Os09g0531600 | OsSHI1 | Detail |
| C1H9g12530 | 9:17,392,757-17,394,375 | - | C2H9g17548 | CX9g055764 | LOC_Os09g36180 | Os09g0531701 | - | Detail |
| C1H9g31859 | 9:17,397,203-17,401,264 | - | C2H9g24133 | CX9g056588 | LOC_Os09g36190 | Os09g0531800 | - | Detail |
| C1H9g23936 | 9:17,402,511-17,406,646 | - | C2H9g14007 | CX9g057674 | LOC_Os09g36190 | Os09g0531900 | OsPDT1 | Detail |
| C1H9g17840 | 9:17,408,765-17,410,448 | - | C2H9g15175 | CX9g054875 | LOC_Os09g36200 | Os09g0532000 | SGR, sgr(t), sgr, OsSGR | Detail |
| C1H9g30254 | 9:17,419,247-17,420,035 | - | C2H9g26470 | CX9g056508 | LOC_Os09g36210 | Os09g0532200 | - | Detail |
| C1H9g21979 | 9:17,421,786-17,426,533 | - | C2H9g26470 | CX9g056292 | LOC_Os09g36220 | Os09g0532400 | - | Detail |
| C1H9g08491 | 9:17,432,340-17,433,560 | + | C2H9g01199 | CX9g055999 | LOC_Os09g36230 | Os09g0532800 | - | Detail |
| C1H9g13364 | 9:17,435,515-17,442,462 | + | C2H9g13859 | CX9g056475 | LOC_Os09g36240 | Os09g0532700 | - | Detail |
| C1H9g05830 | 9:17,444,549-17,446,464 | + | - | CX9g055493 | - | - | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H8g07621 | 8:19,038,591-19,040,730 | + | C1H8g10748 | CX8g053615 | LOC_Os08g35480 | Os08g0455800 | - | Detail |
| C2H8g22753 | 8:19,042,256-19,042,777 | + | C1H9g16538 | CX8g052656 | LOC_Os08g35490 | Os08g0455900 | OsCOPT6 | Detail |
| C2H8g23245 | 8:19,049,405-19,050,967 | - | C1H8g17790 | CX8g051515 | LOC_Os08g35510 | Os08g0456200 | - | Detail |
| C2H8g23126 | 8:19,062,023-19,064,986 | + | C1H8g18609 | CX8g053693 | - | Os08g0456600 | GGC2 | Detail |
| C2H8g03530 | 8:19,068,775-19,069,215 | + | - | CX8g050881 | LOC_Os08g35560 | Os08g0457000 | - | Detail |
| C2H8g05374 | 8:19,079,920-19,082,645 | - | C1H8g01476 | CX8g050648 | LOC_Os08g35600 | Os08g0457400 | - | Detail |
| C2H8g26236 | 8:19,100,814-19,104,849 | + | C1H8g29293 | CX8g053976 | LOC_Os08g35620 | Os08g0457600 | - | Detail |
| C2H8g20335 | 8:19,112,377-19,114,513 | + | C1H8g21210 | CX8g052724 | LOC_Os08g35630 | Os08g0458200 | - | Detail |
| C2H8g28640 | 8:19,124,373-19,128,403 | - | C1H8g03190 | CX8g050819 | LOC_Os08g35650 | Os08g0458600 | - | Detail |
| C2H8g07356 | 8:19,131,220-19,132,900 | - | C1H8g00079 | CX8g054586 | LOC_Os08g35670 | Os08g0458600 | - | Detail |
| C2H8g15550 | 8:19,133,677-19,135,706 | - | C1H8g00079 | CX8g054586 | LOC_Os08g35670 | Os08g0458600 | - | Detail |
| C2H8g23440 | 8:19,150,610-19,156,845 | - | C1H8g05003 | CX8g050910 | LOC_Os08g35700 | Os08g0459100 | - | Detail |
| C2H8g11496 | 8:19,167,469-19,169,816 | - | C1H8g26743 | CX8g052480 | LOC_Os08g35710 | Os08g0459300 | - | Detail |
| C2H8g20588 | 8:19,180,076-19,183,012 | + | C1H8g05129 | CX8g051370 | LOC_Os08g35740 | Os08g0459600 | OPR7, OsOPR08-1, OsOPR13, OsOPR7 | Detail |
| C2H8g08968 | 8:19,186,970-19,187,629 | - | C1H8g18842 | CX8g051144 | LOC_Os08g35750 | Os08g0459700 | - | Detail |
| C2H8g07414 | 8:19,199,104-19,199,745 | - | C1H8g30636 | CX8g052731 | LOC_Os08g35760 | Os08g0460000 | OsGLP1 | Detail |
| C2H8g30350 | 8:19,223,189-19,225,511 | - | C1H8g02143 | CX8g052425 | LOC_Os08g35860 | Os08g0460600 | OsCKX11 | Detail |
| C2H8g16664 | 8:19,242,205-19,244,526 | - | C1H8g26905 | - | LOC_Os08g35930 | Os08g0460700 | - | Detail |
| C2H8g22598 | 8:19,246,662-19,250,599 | - | C1H8g25730 | - | LOC_Os08g35870 | Os08g0460800 | - | Detail |
| C2H8g01646 | 8:19,251,135-19,255,515 | - | C1H8g19850 | - | LOC_Os08g35880 | Os08g0460900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |