| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g21556 | 9:17,127,349-17,133,457 | - | C2H9g08359 | CX9g057694 | LOC_Os09g35760 | Os09g0526300 | - | Detail |
| C1H9g19093 | 9:17,139,670-17,140,260 | + | - | CX9g056474 | LOC_Os09g35780 | Os09g0526500 | - | Detail |
| C1H9g12923 | 9:17,146,380-17,146,933 | - | C2H9g23914 | - | - | - | - | Detail |
| C1H9g05187 | 9:17,148,932-17,150,504 | - | C2H9g25457 | CX9g056876 | LOC_Os09g35790 | Os09g0526600 | - | Detail |
| C1H9g15216 | 9:17,155,623-17,157,739 | - | C2H9g28414 | CX9g055153 | LOC_Os09g35800 | Os09g0526700 | - | Detail |
| C1H9g04329 | 9:17,161,222-17,163,941 | - | C2H9g05438 | CX9g057418 | LOC_Os09g35810 | Os09g0526800 | - | Detail |
| C1H9g13766 | 9:17,173,966-17,175,193 | + | C2H9g26745 | CX9g055265 | LOC_Os09g35830 | Os09g0527100 | - | Detail |
| C1H9g12148 | 9:17,182,248-17,183,559 | + | C2H9g10324 | - | LOC_Os09g35850 | Os09g0527500 | - | Detail |
| C1H9g01116 | 9:17,183,602-17,186,780 | + | C2H9g10324 | CX9g055830 | LOC_Os09g35850 | Os09g0527500 | - | Detail |
| C1H9g07362 | 9:17,190,988-17,192,576 | + | C2H9g01691 | CX9g055927 | LOC_Os09g35860 | Os09g0527600 | - | Detail |
| C1H9g25049 | 9:17,195,929-17,196,462 | - | C2H9g08969 | CX9g056672 | LOC_Os09g35870 | Os09g0527700 | - | Detail |
| C1H9g07553 | 9:17,200,149-17,203,100 | - | C2H9g07509 | CX9g055267 | LOC_Os09g35880 | Os09g0527900 | - | Detail |
| C1H9g01949 | 9:17,208,904-17,212,955 | + | C2H9g28114 | CX9g055134 | LOC_Os09g35890 | Os09g0528000 | - | Detail |
| C1H9g14577 | 9:17,213,730-17,213,993 | + | - | CX9g056632 | LOC_Os09g35900 | Os09g0528100 | - | Detail |
| C1H9g05805 | 9:17,224,444-17,225,287 | + | C2H9g04300 | CX9g055268 | LOC_Os09g35910 | Os09g0528200 | - | Detail |
| C1H9g07637 | 9:17,228,909-17,231,126 | - | C2H9g16123 | CX9g055503 | LOC_Os09g35920 | Os09g0528300 | - | Detail |
| C1H9g29475 | 9:17,242,233-17,244,144 | + | C2H9g26896 | CX9g055183 | LOC_Os09g35940 | Os09g0528700 | - | Detail |
| C1H9g30526 | 9:17,270,916-17,275,957 | - | C2H9g28773 | CX9g055032 | LOC_Os09g35960 | Os09g0528800 | - | Detail |
| C1H9g28769 | 9:17,279,664-17,282,648 | - | C2H9g02120 | CX9g056476 | LOC_Os09g35970 | Os09g0529100 | - | Detail |
| C1H9g03629 | 9:17,285,519-17,293,203 | - | C2H9g25877 | CX9g055769 | LOC_Os09g35980 | Os09g0529300 | SPK, Spk(t), Spk, OsTAC1, TAC1, qTAC9 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13733 | 1:14,339,847-14,345,741 | - | C1H1g14692 | CX1g006593 | - | Os01g0646700 | - | Detail |
| C2H1g10391 | 1:14,452,995-14,456,288 | + | C1H1g23029 | CX1g000153 | LOC_Os01g28474 | Os01g0382200 | - | Detail |
| C2H1g07235 | 1:14,475,874-14,477,626 | - | C1H1g18812 | CX1g003230 | - | Os01g0382450 | - | Detail |
| C2H1g24156 | 1:14,492,696-14,497,806 | + | C1H1g28798 | CX1g004931 | LOC_Os01g28540 | Os01g0382700 | - | Detail |
| C2H1g26525 | 1:14,507,468-14,507,662 | - | C1H1g04405 | CX1g004147 | LOC_Os01g28600 | Os01g0383100 | - | Detail |
| C2H1g27816 | 1:14,507,743-14,509,821 | - | C1H1g12341 | CX1g004147 | LOC_Os01g28600 | Os01g0383100 | - | Detail |
| C2H1g20117 | 1:14,530,982-14,537,457 | + | C1H1g04143 | CX1g006936 | LOC_Os01g28680 | Os01g0383700 | - | Detail |
| C2H1g23621 | 1:14,557,100-14,561,903 | + | C1H1g19835 | CX1g000452 | LOC_Os01g28690 | Os01g0383900 | - | Detail |
| C2H1g25702 | 1:14,587,498-14,588,973 | - | C1H1g08600 | - | LOC_Os01g28744 | Os01g0384450 | - | Detail |
| C2H1g13779 | 1:14,649,874-14,653,065 | - | C1H1g29747 | - | - | - | - | Detail |
| C2H1g16929 | 1:14,655,549-14,659,644 | - | C1H1g23642 | CX1g004545 | LOC_Os01g28810 | Os01g0385000 | - | Detail |
| C2H1g02219 | 1:14,703,488-14,706,551 | - | C1H1g03108 | CX1g003054 | LOC_Os01g28840 | Os01g0385400 | - | Detail |
| C2H1g03263 | 1:14,822,943-14,825,443 | - | C1H1g19328 | CX1g000939 | LOC_Os01g29150 | Os01g0388000 | OsCYP734A6, BLA2 | Detail |
| C2H1g15138 | 1:14,858,236-14,860,329 | - | - | - | - | - | - | Detail |
| C2H1g04945 | 1:14,869,022-14,873,832 | + | C1H1g22044 | - | LOC_Os01g29220 | - | - | Detail |
| C2H1g27614 | 1:14,878,327-14,894,419 | + | C1H1g02613 | CX1g005727 | LOC_Os01g29230 | Os01g0388500 | - | Detail |
| C2H1g05471 | 1:14,904,934-14,905,822 | + | - | - | - | - | - | Detail |
| C2H1g16964 | 1:14,992,148-15,006,012 | + | C1H1g22138 | CX1g000137 | LOC_Os01g29409 | Os01g0390400 | - | Detail |
| C2H1g18964 | 1:15,026,255-15,027,254 | - | C1H1g15888 | - | LOC_Os01g29469 | Os01g0390900 | - | Detail |
| C2H1g01088 | 1:15,030,073-15,033,004 | - | C1H1g13800 | CX1g001981 | LOC_Os01g29469 | Os01g0390900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |