| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g21556 | 9:17,127,349-17,133,457 | - | C2H9g08359 | CX9g057694 | LOC_Os09g35760 | Os09g0526300 | - | Detail |
| C1H9g19093 | 9:17,139,670-17,140,260 | + | - | CX9g056474 | LOC_Os09g35780 | Os09g0526500 | - | Detail |
| C1H9g12923 | 9:17,146,380-17,146,933 | - | C2H9g23914 | - | - | - | - | Detail |
| C1H9g05187 | 9:17,148,932-17,150,504 | - | C2H9g25457 | CX9g056876 | LOC_Os09g35790 | Os09g0526600 | - | Detail |
| C1H9g15216 | 9:17,155,623-17,157,739 | - | C2H9g28414 | CX9g055153 | LOC_Os09g35800 | Os09g0526700 | - | Detail |
| C1H9g04329 | 9:17,161,222-17,163,941 | - | C2H9g05438 | CX9g057418 | LOC_Os09g35810 | Os09g0526800 | - | Detail |
| C1H9g13766 | 9:17,173,966-17,175,193 | + | C2H9g26745 | CX9g055265 | LOC_Os09g35830 | Os09g0527100 | - | Detail |
| C1H9g12148 | 9:17,182,248-17,183,559 | + | C2H9g10324 | - | LOC_Os09g35850 | Os09g0527500 | - | Detail |
| C1H9g01116 | 9:17,183,602-17,186,780 | + | C2H9g10324 | CX9g055830 | LOC_Os09g35850 | Os09g0527500 | - | Detail |
| C1H9g07362 | 9:17,190,988-17,192,576 | + | C2H9g01691 | CX9g055927 | LOC_Os09g35860 | Os09g0527600 | - | Detail |
| C1H9g25049 | 9:17,195,929-17,196,462 | - | C2H9g08969 | CX9g056672 | LOC_Os09g35870 | Os09g0527700 | - | Detail |
| C1H9g07553 | 9:17,200,149-17,203,100 | - | C2H9g07509 | CX9g055267 | LOC_Os09g35880 | Os09g0527900 | - | Detail |
| C1H9g01949 | 9:17,208,904-17,212,955 | + | C2H9g28114 | CX9g055134 | LOC_Os09g35890 | Os09g0528000 | - | Detail |
| C1H9g14577 | 9:17,213,730-17,213,993 | + | - | CX9g056632 | LOC_Os09g35900 | Os09g0528100 | - | Detail |
| C1H9g05805 | 9:17,224,444-17,225,287 | + | C2H9g04300 | CX9g055268 | LOC_Os09g35910 | Os09g0528200 | - | Detail |
| C1H9g07637 | 9:17,228,909-17,231,126 | - | C2H9g16123 | CX9g055503 | LOC_Os09g35920 | Os09g0528300 | - | Detail |
| C1H9g29475 | 9:17,242,233-17,244,144 | + | C2H9g26896 | CX9g055183 | LOC_Os09g35940 | Os09g0528700 | - | Detail |
| C1H9g30526 | 9:17,270,916-17,275,957 | - | C2H9g28773 | CX9g055032 | LOC_Os09g35960 | Os09g0528800 | - | Detail |
| C1H9g28769 | 9:17,279,664-17,282,648 | - | C2H9g02120 | CX9g056476 | LOC_Os09g35970 | Os09g0529100 | - | Detail |
| C1H9g03629 | 9:17,285,519-17,293,203 | - | C2H9g25877 | CX9g055769 | LOC_Os09g35980 | Os09g0529300 | SPK, Spk(t), Spk, OsTAC1, TAC1, qTAC9 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g16063 | 6:1,298,270-1,302,747 | - | C1H6g02287 | CX6g045089 | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C2H6g07865 | 6:1,302,944-1,304,048 | - | C1H6g27088 | - | LOC_Os06g04340 | Os06g0134400 | - | Detail |
| C2H6g27381 | 6:1,306,054-1,310,790 | - | C1H6g08483 | CX6g042141 | LOC_Os06g04350 | Os06g0134466 | - | Detail |
| C2H6g14180 | 6:1,311,671-1,314,884 | - | - | - | - | - | - | Detail |
| C2H6g21512 | 6:1,315,108-1,315,376 | - | C1H6g12134 | CX6g042141 | LOC_Os06g04360 | Os06g0134500 | - | Detail |
| C2H6g22079 | 6:1,318,592-1,321,827 | + | C1H6g22115 | CX6g044169 | LOC_Os06g04370 | Os06g0134700 | - | Detail |
| C2H6g05948 | 6:1,327,013-1,330,532 | - | C1H6g09734 | CX6g042673 | LOC_Os06g04380 | Os06g0134800 | - | Detail |
| C2H6g22649 | 6:1,331,224-1,334,901 | - | C1H6g26114 | CX6g045585 | LOC_Os06g04390 | Os06g0134900 | - | Detail |
| C2H6g20533 | 6:1,345,384-1,351,995 | - | C1H6g17670 | CX6g044281 | LOC_Os06g04450 | Os06g0135900 | - | Detail |
| C2H6g29697 | 6:1,352,759-1,356,078 | - | C1H6g18799 | CX6g041186 | LOC_Os06g04460 | Os06g0136000 | - | Detail |
| C2H6g03212 | 6:1,357,633-1,359,005 | - | C1H6g16251 | CX6g045091 | LOC_Os06g04470 | Os06g0136100 | - | Detail |
| C2H6g27965 | 6:1,363,771-1,364,348 | + | C1H6g20742 | CX6g042860 | LOC_Os06g04480 | Os06g0136300 | - | Detail |
| C2H6g24780 | 6:1,368,075-1,369,505 | + | C1H6g01692 | CX6g043687 | LOC_Os06g04500 | Os06g0136500 | - | Detail |
| C2H6g14254 | 6:1,371,597-1,378,214 | - | C1H6g11836 | CX6g043134 | LOC_Os06g04510 | Os06g0136600 | - | Detail |
| C2H6g06858 | 6:1,379,709-1,390,757 | + | C1H6g12650 | CX6g041242 | LOC_Os06g04520 | Os06g0136700 | - | Detail |
| C2H6g29816 | 6:1,391,384-1,394,303 | + | C1H6g27183 | CX6g041371 | LOC_Os06g04530 | Os06g0136800 | - | Detail |
| C2H6g07263 | 6:1,403,667-1,404,653 | - | - | CX6g044427 | LOC_Os06g04540 | Os06g0136900 | DP1 | Detail |
| C2H6g26508 | 6:1,413,842-1,422,640 | - | C1H6g03718 | CX6g041492 | LOC_Os06g04560 | Os06g0137100 | - | Detail |
| C2H6g14543 | 6:1,427,819-1,431,168 | + | C1H6g00708 | CX6g043823 | LOC_Os06g04580 | Os06g0137300 | OsYAF9 | Detail |
| C2H6g11377 | 6:1,437,375-1,437,734 | + | C1H6g23167 | CX6g045942 | LOC_Os06g04590 | Os06g0137400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |