| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g21556 | 9:17,127,349-17,133,457 | - | C2H9g08359 | CX9g057694 | LOC_Os09g35760 | Os09g0526300 | - | Detail |
| C1H9g19093 | 9:17,139,670-17,140,260 | + | - | CX9g056474 | LOC_Os09g35780 | Os09g0526500 | - | Detail |
| C1H9g12923 | 9:17,146,380-17,146,933 | - | C2H9g23914 | - | - | - | - | Detail |
| C1H9g05187 | 9:17,148,932-17,150,504 | - | C2H9g25457 | CX9g056876 | LOC_Os09g35790 | Os09g0526600 | - | Detail |
| C1H9g15216 | 9:17,155,623-17,157,739 | - | C2H9g28414 | CX9g055153 | LOC_Os09g35800 | Os09g0526700 | - | Detail |
| C1H9g04329 | 9:17,161,222-17,163,941 | - | C2H9g05438 | CX9g057418 | LOC_Os09g35810 | Os09g0526800 | - | Detail |
| C1H9g13766 | 9:17,173,966-17,175,193 | + | C2H9g26745 | CX9g055265 | LOC_Os09g35830 | Os09g0527100 | - | Detail |
| C1H9g12148 | 9:17,182,248-17,183,559 | + | C2H9g10324 | - | LOC_Os09g35850 | Os09g0527500 | - | Detail |
| C1H9g01116 | 9:17,183,602-17,186,780 | + | C2H9g10324 | CX9g055830 | LOC_Os09g35850 | Os09g0527500 | - | Detail |
| C1H9g07362 | 9:17,190,988-17,192,576 | + | C2H9g01691 | CX9g055927 | LOC_Os09g35860 | Os09g0527600 | - | Detail |
| C1H9g25049 | 9:17,195,929-17,196,462 | - | C2H9g08969 | CX9g056672 | LOC_Os09g35870 | Os09g0527700 | - | Detail |
| C1H9g07553 | 9:17,200,149-17,203,100 | - | C2H9g07509 | CX9g055267 | LOC_Os09g35880 | Os09g0527900 | - | Detail |
| C1H9g01949 | 9:17,208,904-17,212,955 | + | C2H9g28114 | CX9g055134 | LOC_Os09g35890 | Os09g0528000 | - | Detail |
| C1H9g14577 | 9:17,213,730-17,213,993 | + | - | CX9g056632 | LOC_Os09g35900 | Os09g0528100 | - | Detail |
| C1H9g05805 | 9:17,224,444-17,225,287 | + | C2H9g04300 | CX9g055268 | LOC_Os09g35910 | Os09g0528200 | - | Detail |
| C1H9g07637 | 9:17,228,909-17,231,126 | - | C2H9g16123 | CX9g055503 | LOC_Os09g35920 | Os09g0528300 | - | Detail |
| C1H9g29475 | 9:17,242,233-17,244,144 | + | C2H9g26896 | CX9g055183 | LOC_Os09g35940 | Os09g0528700 | - | Detail |
| C1H9g30526 | 9:17,270,916-17,275,957 | - | C2H9g28773 | CX9g055032 | LOC_Os09g35960 | Os09g0528800 | - | Detail |
| C1H9g28769 | 9:17,279,664-17,282,648 | - | C2H9g02120 | CX9g056476 | LOC_Os09g35970 | Os09g0529100 | - | Detail |
| C1H9g03629 | 9:17,285,519-17,293,203 | - | C2H9g25877 | CX9g055769 | LOC_Os09g35980 | Os09g0529300 | SPK, Spk(t), Spk, OsTAC1, TAC1, qTAC9 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g29211 | 5:24,773,434-24,778,298 | - | C1H5g20997 | CX5g038490 | LOC_Os05g51560 | Os05g0593800 | - | Detail |
| C2H5g25800 | 5:24,781,493-24,782,926 | - | C1H5g28104 | CX5g040981 | LOC_Os05g51570 | Os05g0593900 | - | Detail |
| C2H5g28633 | 5:24,788,568-24,789,401 | - | C1H5g28669 | CX5g037849 | LOC_Os05g51590 | Os05g0594100 | - | Detail |
| C2H5g27012 | 5:24,791,474-24,795,427 | - | C1H5g07980 | CX5g040080 | LOC_Os05g51610 | Os05g0594200 | OsCAX1b | Detail |
| C2H5g24138 | 5:24,807,669-24,813,399 | - | C1H5g15566 | CX5g038359 | LOC_Os05g51620 | Os05g0594500 | - | Detail |
| C2H5g08909 | 5:24,821,276-24,829,119 | + | C1H5g26110 | CX5g041049 | LOC_Os05g51630 | Os05g0594700 | - | Detail |
| C2H5g25499 | 5:24,830,313-24,834,947 | - | C1H5g09316 | CX5g039720 | LOC_Os05g51640 | Os05g0594800 | - | Detail |
| C2H5g10034 | 5:24,834,804-24,835,256 | + | - | - | - | - | - | Detail |
| C2H5g15674 | 5:24,835,328-24,836,809 | + | C1H5g23946 | - | LOC_Os05g51650 | Os05g0594900 | - | Detail |
| C2H5g18619 | 5:24,837,143-24,837,715 | - | C1H5g07547 | CX5g039507 | LOC_Os05g51660 | Os05g0595000 | - | Detail |
| C2H5g04566 | 5:24,847,706-24,851,120 | + | C1H5g22966 | CX5g037190 | LOC_Os05g51670 | Os05g0595100 | OsUGE1, OsUGE-1, UGE1, UGE-1, BP1 | Detail |
| C2H5g00689 | 5:24,855,205-24,879,340 | + | C1H5g29705 | CX5g037572 | LOC_Os05g51690 | Os05g0595300 | CRCT, NRR, NRRa | Detail |
| C2H5g03425 | 5:24,855,293-24,856,027 | - | C1H5g17200 | CX5g039657 | LOC_Os05g51680 | Os05g0595200 | - | Detail |
| C2H5g25216 | 5:24,879,621-24,882,457 | - | C1H5g10995 | CX5g038125 | LOC_Os05g51700 | Os05g0595400 | - | Detail |
| C2H5g14814 | 5:24,883,294-24,885,392 | - | C1H5g27674 | CX5g041076 | LOC_Os05g51710 | Os05g0595500 | - | Detail |
| C2H5g08054 | 5:24,889,439-24,889,771 | + | C1H6g06805 | CX5g039789 | - | Os05g0429100 | - | Detail |
| C2H5g23094 | 5:24,890,282-24,894,145 | - | C1H5g24835 | CX5g037161 | LOC_Os05g51740 | Os05g0595800 | - | Detail |
| C2H5g15029 | 5:24,896,984-24,897,528 | - | C1H5g11204 | CX5g037472 | LOC_Os05g45954 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| C2H5g10878 | 5:24,898,710-24,900,326 | + | C1H5g19628 | CX5g037109 | LOC_Os05g51750 | Os05g0596000 | - | Detail |
| C2H5g03677 | 5:24,902,561-24,903,473 | - | C1H5g15344 | CX5g040213 | LOC_Os05g51754 | Os05g0596200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |