| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g02380 | 9:16,963,644-16,965,107 | + | C2H9g20646 | CX9g056068 | LOC_Os09g34930 | Os09g0521100 | - | Detail |
| C1H9g10173 | 9:16,970,360-16,971,499 | - | C2H8g03110 | - | LOC_Os09g34950 | Os09g0521300 | - | Detail |
| C1H9g10520 | 9:16,973,922-16,977,725 | + | C2H9g14810 | CX9g057233 | LOC_Os09g34960 | Os09g0521400 | - | Detail |
| C1H9g25845 | 9:16,978,628-16,982,043 | - | C2H9g26372 | CX9g055738 | LOC_Os09g34970 | Os09g0521500 | - | Detail |
| C1H9g12508 | 9:16,983,878-16,987,028 | - | C2H9g23293 | CX9g056886 | LOC_Os09g34990 | Os09g0521800 | - | Detail |
| C1H9g18470 | 9:16,987,133-16,989,913 | - | C2H9g23293 | CX9g056886 | LOC_Os09g34990 | Os09g0521800 | - | Detail |
| C1H9g22775 | 9:16,990,571-16,994,638 | + | C2H9g12959 | CX9g058042 | LOC_Os09g35000 | Os09g0521900 | RAD, OsGEN1, rad, rad*, OsRAD, GEN1, OsGEN-L | Detail |
| C1H9g14501 | 9:16,996,288-16,996,956 | - | C2H9g15745 | CX9g056315 | LOC_Os09g35010 | Os09g0522000 | OsDREB1B | Detail |
| C1H9g18822 | 9:16,999,862-17,000,602 | - | C2H9g15745 | CX9g057270 | LOC_Os09g35020 | Os09g0522100 | - | Detail |
| C1H9g24368 | 9:17,004,252-17,005,001 | - | C2H9g15745 | CX9g055958 | LOC_Os09g35030 | Os09g0522200 | OsDREB1A | Detail |
| C1H9g01072 | 9:17,039,373-17,041,007 | - | C2H9g10935 | CX9g057900 | LOC_Os09g35600 | Os09g0524300 | - | Detail |
| C1H9g22926 | 9:17,062,634-17,064,682 | - | C2H9g13075 | CX9g057513 | LOC_Os09g35630 | Os09g0524800 | - | Detail |
| C1H9g31662 | 9:17,073,293-17,076,161 | + | C2H9g25776 | CX9g056603 | LOC_Os09g35670 | Os09g0525200 | - | Detail |
| C1H9g25445 | 9:17,076,742-17,079,386 | - | C2H9g21918 | CX9g055378 | LOC_Os09g35680 | Os09g0525300 | - | Detail |
| C1H9g08911 | 9:17,083,815-17,088,515 | - | C2H9g16534 | CX9g058055 | LOC_Os09g35690 | Os09g0525400 | E3BB | Detail |
| C1H9g02024 | 9:17,089,268-17,089,681 | + | C2H9g00761 | CX9g057849 | LOC_Os09g35700 | Os09g0525500 | - | Detail |
| C1H9g15317 | 9:17,090,344-17,095,359 | - | C2H9g16855 | CX9g057451 | LOC_Os09g35710 | Os09g0525600 | - | Detail |
| C1H9g29308 | 9:17,097,510-17,103,645 | - | C2H9g29379 | CX9g057247 | LOC_Os09g35720 | Os09g0525700 | - | Detail |
| C1H9g08625 | 9:17,105,510-17,108,695 | - | C2H9g07857 | CX9g055034 | LOC_Os09g35730 | Os09g0525900 | - | Detail |
| C1H9g31758 | 9:17,115,330-17,116,050 | + | C2H9g18140 | CX9g054877 | LOC_Os09g35740 | Os09g0526000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g27007 | 4:27,628,714-27,632,351 | - | C1H4g15756 | CX4g033542 | LOC_Os04g53510 | Os04g0626600 | - | Detail |
| C2H4g13550 | 4:27,633,987-27,638,322 | - | C1H4g30303 | CX4g033542 | LOC_Os04g53520 | Os04g0626700 | - | Detail |
| C2H4g30483 | 4:27,640,360-27,645,156 | + | C1H4g26337 | CX4g035627 | LOC_Os04g53530 | Os04g0626900 | - | Detail |
| C2H4g26106 | 4:27,645,102-27,652,282 | - | C1H4g28934 | CX4g034251 | LOC_Os04g53540 | Os04g0569100 | ROC4, Roc4 | Detail |
| C2H4g07233 | 4:27,658,446-27,666,718 | - | C1H4g03362 | - | LOC_Os04g53550 | Os04g0627132 | - | Detail |
| C2H4g10303 | 4:27,666,971-27,667,645 | - | C1H4g14911 | CX4g034529 | LOC_Os04g53550 | Os04g0627200 | - | Detail |
| C2H4g14741 | 4:27,672,117-27,672,884 | + | C1H4g23088 | CX4g032258 | LOC_Os04g53560 | Os04g0627300 | - | Detail |
| C2H4g22454 | 4:27,677,077-27,678,671 | - | C1H4g30660 | CX4g034354 | LOC_Os04g53580 | Os04g0627400 | - | Detail |
| C2H4g19362 | 4:27,685,044-27,687,489 | - | C1H4g12581 | CX4g033798 | LOC_Os04g53612 | Os04g0628000 | - | Detail |
| C2H4g25755 | 4:27,691,329-27,698,059 | + | C1H4g20793 | CX4g033819 | LOC_Os04g53630 | Os04g0628200 | - | Detail |
| C2H4g09027 | 4:27,699,678-27,700,346 | + | C1H4g25538 | CX4g031787 | LOC_Os04g53650 | Os04g0628300 | - | Detail |
| C2H4g12158 | 4:27,703,123-27,708,963 | - | C1H4g00150 | CX4g035421 | LOC_Os04g53660 | Os04g0628400 | - | Detail |
| C2H4g14925 | 4:27,710,063-27,720,466 | - | C1H4g16750 | CX4g031603 | LOC_Os04g53670 | Os04g0628600 | - | Detail |
| C2H4g23818 | 4:27,724,116-27,725,906 | + | C1H4g04700 | CX4g034974 | LOC_Os04g53680 | Os04g0628900 | - | Detail |
| C2H4g29403 | 4:27,727,647-27,730,332 | + | C1H4g12167 | CX4g036640 | LOC_Os04g53690 | Os04g0629000 | - | Detail |
| C2H4g22771 | 4:27,730,786-27,735,397 | - | C1H4g18446 | CX4g034413 | LOC_Os04g53700 | Os04g0629100 | - | Detail |
| C2H4g09379 | 4:27,736,595-27,737,494 | + | C1H4g24587 | CX4g036336 | LOC_Os04g53710 | Os04g0629200 | - | Detail |
| C2H4g19513 | 4:27,738,264-27,743,735 | - | C1H4g06832 | CX4g032888 | LOC_Os04g53720 | Os04g0629300 | OsCHR715, CHR715 | Detail |
| C2H4g02318 | 4:27,746,594-27,746,962 | - | C1H4g16584 | CX4g035073 | LOC_Os04g53730 | Os04g0629400 | - | Detail |
| C2H4g17413 | 4:27,748,524-27,749,706 | - | C1H4g16584 | CX4g034863 | LOC_Os04g53740 | Os04g0629500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |