| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g02380 | 9:16,963,644-16,965,107 | + | C2H9g20646 | CX9g056068 | LOC_Os09g34930 | Os09g0521100 | - | Detail |
| C1H9g10173 | 9:16,970,360-16,971,499 | - | C2H8g03110 | - | LOC_Os09g34950 | Os09g0521300 | - | Detail |
| C1H9g10520 | 9:16,973,922-16,977,725 | + | C2H9g14810 | CX9g057233 | LOC_Os09g34960 | Os09g0521400 | - | Detail |
| C1H9g25845 | 9:16,978,628-16,982,043 | - | C2H9g26372 | CX9g055738 | LOC_Os09g34970 | Os09g0521500 | - | Detail |
| C1H9g12508 | 9:16,983,878-16,987,028 | - | C2H9g23293 | CX9g056886 | LOC_Os09g34990 | Os09g0521800 | - | Detail |
| C1H9g18470 | 9:16,987,133-16,989,913 | - | C2H9g23293 | CX9g056886 | LOC_Os09g34990 | Os09g0521800 | - | Detail |
| C1H9g22775 | 9:16,990,571-16,994,638 | + | C2H9g12959 | CX9g058042 | LOC_Os09g35000 | Os09g0521900 | RAD, OsGEN1, rad, rad*, OsRAD, GEN1, OsGEN-L | Detail |
| C1H9g14501 | 9:16,996,288-16,996,956 | - | C2H9g15745 | CX9g056315 | LOC_Os09g35010 | Os09g0522000 | OsDREB1B | Detail |
| C1H9g18822 | 9:16,999,862-17,000,602 | - | C2H9g15745 | CX9g057270 | LOC_Os09g35020 | Os09g0522100 | - | Detail |
| C1H9g24368 | 9:17,004,252-17,005,001 | - | C2H9g15745 | CX9g055958 | LOC_Os09g35030 | Os09g0522200 | OsDREB1A | Detail |
| C1H9g01072 | 9:17,039,373-17,041,007 | - | C2H9g10935 | CX9g057900 | LOC_Os09g35600 | Os09g0524300 | - | Detail |
| C1H9g22926 | 9:17,062,634-17,064,682 | - | C2H9g13075 | CX9g057513 | LOC_Os09g35630 | Os09g0524800 | - | Detail |
| C1H9g31662 | 9:17,073,293-17,076,161 | + | C2H9g25776 | CX9g056603 | LOC_Os09g35670 | Os09g0525200 | - | Detail |
| C1H9g25445 | 9:17,076,742-17,079,386 | - | C2H9g21918 | CX9g055378 | LOC_Os09g35680 | Os09g0525300 | - | Detail |
| C1H9g08911 | 9:17,083,815-17,088,515 | - | C2H9g16534 | CX9g058055 | LOC_Os09g35690 | Os09g0525400 | E3BB | Detail |
| C1H9g02024 | 9:17,089,268-17,089,681 | + | C2H9g00761 | CX9g057849 | LOC_Os09g35700 | Os09g0525500 | - | Detail |
| C1H9g15317 | 9:17,090,344-17,095,359 | - | C2H9g16855 | CX9g057451 | LOC_Os09g35710 | Os09g0525600 | - | Detail |
| C1H9g29308 | 9:17,097,510-17,103,645 | - | C2H9g29379 | CX9g057247 | LOC_Os09g35720 | Os09g0525700 | - | Detail |
| C1H9g08625 | 9:17,105,510-17,108,695 | - | C2H9g07857 | CX9g055034 | LOC_Os09g35730 | Os09g0525900 | - | Detail |
| C1H9g31758 | 9:17,115,330-17,116,050 | + | C2H9g18140 | CX9g054877 | LOC_Os09g35740 | Os09g0526000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g14560 | 9:18,510,240-18,511,177 | - | - | - | - | Os09g0551000 | - | Detail |
| C2H9g15560 | 9:18,511,260-18,519,351 | - | C1H9g00756 | CX9g057667 | LOC_Os09g37834 | Os09g0551000 | - | Detail |
| C2H9g18567 | 9:18,519,786-18,522,730 | - | C1H9g00756 | CX9g057667 | LOC_Os09g37840 | Os09g0551201 | SDK1 | Detail |
| C2H9g30036 | 9:18,524,325-18,526,305 | - | C1H9g14993 | CX9g057667 | LOC_Os09g37840 | Os09g0551201 | SDK1 | Detail |
| C2H9g10203 | 9:18,526,418-18,530,520 | - | C1H9g14993 | CX9g057667 | LOC_Os09g37840 | Os09g0551251 | SDK11 | Detail |
| C2H9g23601 | 9:18,536,271-18,541,647 | + | C1H9g23922 | CX9g055805 | LOC_Os09g37860 | Os09g0551300 | - | Detail |
| C2H9g18325 | 9:18,549,604-18,553,469 | + | C1H9g22027 | CX9g057667 | LOC_Os09g37840 | Os09g0551400 | SDRLK-42 | Detail |
| C2H9g05665 | 9:18,554,819-18,560,466 | - | C1H9g23767 | CX9g057667 | LOC_Os09g37840 | Os09g0551500 | SDRLK-43 | Detail |
| C2H9g09248 | 9:18,564,920-18,566,709 | + | C1H9g20157 | CX9g055996 | LOC_Os09g37910 | Os09g0551600 | - | Detail |
| C2H9g00765 | 9:18,568,706-18,576,273 | - | C1H9g09501 | CX9g055169 | LOC_Os09g37920 | Os09g0551800 | - | Detail |
| C2H9g18827 | 9:18,576,747-18,585,978 | - | C1H9g15933 | CX9g057646 | LOC_Os09g37930 | - | - | Detail |
| C2H9g26371 | 9:18,591,347-18,594,122 | - | C1H9g08089 | CX9g054990 | LOC_Os09g37949 | Os09g0552300 | - | Detail |
| C2H9g23182 | 9:18,597,456-18,599,241 | - | C1H9g25273 | CX9g055948 | LOC_Os09g37958 | Os09g0552600 | - | Detail |
| C2H9g28554 | 9:18,601,445-18,602,602 | - | C1H9g09840 | CX9g056393 | LOC_Os09g37976 | Os09g0552600 | - | Detail |
| C2H9g14226 | 9:18,606,239-18,608,507 | + | C1H9g15676 | CX9g054872 | LOC_Os09g38000 | Os09g0552800 | OsNAC109, YL3 | Detail |
| C2H9g12533 | 9:18,611,084-18,613,215 | + | C1H9g26813 | CX9g057788 | LOC_Os09g38010 | Os09g0552900 | - | Detail |
| C2H9g10941 | 9:18,620,794-18,625,942 | + | C1H9g17635 | CX9g055376 | LOC_Os09g38030 | Os09g0553200 | UGP1, Ugp1, OsUgp1, UGP2, UGP3 | Detail |
| C2H9g21953 | 9:18,626,744-18,629,492 | - | C1H9g26934 | CX9g058064 | LOC_Os09g38040 | Os09g0553300 | - | Detail |
| C2H9g19006 | 9:18,634,233-18,638,099 | + | C1H9g10869 | CX9g056104 | LOC_Os09g38060 | Os09g0553600 | - | Detail |
| C2H9g11910 | 9:18,640,615-18,641,481 | - | C1H9g05696 | - | LOC_Os09g38070 | Os09g0553700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |