| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g18681 | 9:16,558,344-16,560,362 | + | C2H9g19049 | CX9g057112 | LOC_Os09g33800 | Os09g0512900 | - | Detail |
| C1H9g21302 | 9:16,563,354-16,566,520 | + | C2H9g05244 | CX9g057668 | LOC_Os09g33810 | Os09g0513000 | XB25, OsBIANK1 | Detail |
| C1H9g13028 | 9:16,567,607-16,572,764 | + | C2H9g25504 | CX9g056927 | LOC_Os09g33820 | Os09g0513100 | - | Detail |
| C1H9g17758 | 9:16,581,702-16,585,533 | - | C2H9g19441 | CX9g055565 | LOC_Os09g33830 | Os09g0513200 | - | Detail |
| C1H9g07370 | 9:16,587,918-16,595,932 | + | C2H9g16624 | - | - | Os09g0513400 | - | Detail |
| C1H9g22571 | 9:16,588,910-16,594,643 | - | C2H9g04136 | CX9g056313 | LOC_Os09g33850 | Os09g0513500 | OsFTL4 | Detail |
| C1H9g00324 | 9:16,599,338-16,603,486 | + | C2H9g11746 | CX9g056535 | LOC_Os09g33860 | Os09g0513600 | - | Detail |
| C1H9g30384 | 9:16,604,801-16,607,693 | + | C2H9g05835 | CX9g055577 | LOC_Os09g33870 | Os09g0513700 | - | Detail |
| C1H9g01210 | 9:16,608,963-16,614,120 | + | C2H9g16871 | CX9g056586 | LOC_Os09g33876 | Os09g0513800 | - | Detail |
| C1H9g26866 | 9:16,615,166-16,618,740 | + | C2H9g30323 | CX9g057051 | LOC_Os09g33900 | Os09g0514100 | - | Detail |
| C1H9g26023 | 9:16,618,907-16,622,246 | - | C2H9g21780 | CX9g054893 | LOC_Os09g33910 | Os09g0514200 | OsCPK22 | Detail |
| C1H9g31117 | 9:16,623,281-16,626,182 | + | C2H9g22745 | CX9g056514 | LOC_Os09g33920 | Os09g0514300 | - | Detail |
| C1H9g08070 | 9:16,626,871-16,629,889 | + | C2H9g14321 | CX9g057899 | LOC_Os09g33930 | Os09g0514400 | - | Detail |
| C1H9g16411 | 9:16,635,191-16,640,447 | + | C2H9g15893 | CX9g056492 | LOC_Os09g33940 | Os09g0514500 | - | Detail |
| C1H9g13316 | 9:16,642,790-16,643,278 | - | C2H9g14978 | - | LOC_Os09g33950 | Os09g0514600 | - | Detail |
| C1H9g05060 | 9:16,645,781-16,653,516 | + | C2H9g07313 | CX9g054896 | LOC_Os09g33960 | Os09g0514700 | - | Detail |
| C1H9g00442 | 9:16,654,794-16,658,600 | + | C2H9g01458 | CX9g055459 | LOC_Os09g33970 | Os09g0514900 | - | Detail |
| C1H9g21879 | 9:16,660,572-16,667,699 | + | - | - | - | - | - | Detail |
| C1H9g29441 | 9:16,668,042-16,670,549 | - | C2H9g20174 | CX9g056692 | LOC_Os09g33986 | Os09g0515200 | - | Detail |
| C1H9g06953 | 9:16,673,016-16,675,721 | - | C2H9g06626 | CX9g055699 | LOC_Os09g33992 | Os09g0515300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g02435 | 4:26,718,889-26,720,819 | + | C1H4g11906 | CX4g031886 | LOC_Os04g52361 | Os04g0613500 | - | Detail |
| C2H4g14262 | 4:26,724,353-26,728,915 | - | C1H4g03528 | CX4g033920 | LOC_Os04g52370 | Os04g0613700 | UAP2 | Detail |
| C2H4g30596 | 4:26,734,579-26,740,509 | - | C1H4g12683 | CX4g033615 | LOC_Os04g52380 | Os04g0613800 | - | Detail |
| C2H4g10814 | 4:26,743,828-26,748,949 | - | C1H4g15444 | CX4g032046 | LOC_Os04g52390 | Os04g0613900 | - | Detail |
| C2H4g02940 | 4:26,754,868-26,757,310 | + | C1H4g09621 | CX4g033364 | LOC_Os04g52400 | Os04g0614000 | - | Detail |
| C2H4g14823 | 4:26,758,946-26,760,350 | + | C1H4g18002 | CX4g033138 | LOC_Os04g52410 | Os04g0614100 | - | Detail |
| C2H4g28997 | 4:26,763,313-26,766,976 | + | C1H4g00068 | CX4g031526 | LOC_Os04g52420 | Os04g0616900 | - | Detail |
| C2H4g06699 | 4:26,770,988-26,772,512 | + | C1H4g05036 | - | - | Os04g0614300 | - | Detail |
| C2H4g17218 | 4:26,775,472-26,781,526 | + | C1H4g02712 | CX4g035904 | LOC_Os04g52450 | Os04g0614600 | - | Detail |
| C2H4g10708 | 4:26,790,164-26,799,292 | + | C1H4g17515 | CX4g035957 | LOC_Os04g52460 | Os04g0614700 | - | Detail |
| C2H4g23243 | 4:26,811,933-26,816,868 | + | C1H4g20369 | CX4g036351 | LOC_Os04g52479 | Os04g0615000 | NAL1, nal1, cul1, GPS, SPIKE, SPIKE/LSCHL4/NAL1/GPS, SPIKE/NAL1, LSCHL4 | Detail |
| C2H4g24013 | 4:26,817,995-26,822,447 | + | C1H4g29702 | CX4g034949 | LOC_Os04g52500 | Os04g0615100 | - | Detail |
| C2H4g04550 | 4:26,823,039-26,823,723 | - | C1H4g06180 | - | LOC_Os04g52504 | Os04g0615200 | - | Detail |
| C2H4g11553 | 4:26,826,153-26,829,725 | + | C1H4g16195 | CX4g031653 | LOC_Os04g52520 | Os04g0615500 | - | Detail |
| C2H4g12331 | 4:26,830,483-26,831,606 | + | C1H4g22078 | CX4g031949 | LOC_Os04g52530 | Os04g0615600 | - | Detail |
| C2H4g15420 | 4:26,843,505-26,848,072 | + | C1H4g15848 | CX4g034962 | LOC_Os04g52540 | Os04g0615700 | OsAGO2 | Detail |
| C2H4g00576 | 4:26,849,148-26,854,139 | + | C1H4g23171 | CX4g031812 | LOC_Os04g52550 | Os04g0615800 | - | Detail |
| C2H4g30305 | 4:26,854,437-26,858,817 | - | C1H4g27864 | CX4g035991 | LOC_Os04g52560 | Os04g0615900 | - | Detail |
| C2H4g12428 | 4:26,857,632-26,858,214 | + | - | - | - | - | - | Detail |
| C2H4g21361 | 4:26,858,288-26,858,792 | + | - | - | - | Os04g0615850 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |