| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g29478 | 9:16,389,509-16,395,873 | + | C2H9g06327 | CX9g057601 | LOC_Os09g33500 | Os09g0509200 | - | Detail |
| C1H9g15901 | 9:16,397,154-16,404,688 | + | C2H9g10101 | CX9g058204 | LOC_Os09g33510 | Os09g0509300 | WEG1 | Detail |
| C1H9g15862 | 9:16,408,832-16,413,897 | + | C2H9g04957 | CX9g055855 | LOC_Os09g33520 | Os09g0509400 | - | Detail |
| C1H9g17965 | 9:16,414,190-16,419,187 | - | C2H9g14518 | CX9g058193 | LOC_Os09g33530 | Os09g0509500 | - | Detail |
| C1H9g04511 | 9:16,421,318-16,424,168 | - | C2H9g12462 | CX9g056413 | LOC_Os09g33550 | Os09g0509700 | - | Detail |
| C1H9g11265 | 9:16,433,249-16,435,664 | + | - | CX9g058151 | LOC_Os09g33559 | Os09g0510000 | - | Detail |
| C1H9g11281 | 9:16,437,077-16,439,269 | + | C2H9g04068 | CX9g058151 | - | Os09g0510200 | - | Detail |
| C1H9g15137 | 9:16,451,997-16,453,533 | - | C2H9g26341 | CX9g056619 | LOC_Os09g33580 | Os09g0510500 | OsBC1, OsbHLH081, OsbHLH082 | Detail |
| C1H9g21051 | 9:16,458,985-16,466,718 | - | C2H9g18076 | CX9g057001 | LOC_Os09g33600 | Os09g0510700 | - | Detail |
| C1H9g03900 | 9:16,478,005-16,483,125 | - | C2H9g05808 | CX9g055215 | LOC_Os09g33620 | Os09g0510900 | - | Detail |
| C1H9g13447 | 9:16,485,958-16,492,026 | + | C2H9g14546 | CX9g057751 | LOC_Os09g33630 | Os09g0511000 | OsCERK2, OsRLK10, OsCERK2/OsRLK10 | Detail |
| C1H9g24699 | 9:16,493,882-16,494,604 | + | C2H9g06231 | CX9g056377 | LOC_Os09g33640 | Os09g0511200 | - | Detail |
| C1H9g26937 | 9:16,501,317-16,501,982 | + | C2H9g06231 | CX9g055485 | LOC_Os09g33650 | Os09g0511300 | - | Detail |
| C1H9g13732 | 9:16,505,827-16,509,486 | + | C2H9g26021 | CX9g055613 | LOC_Os09g33670 | Os09g0511500 | - | Detail |
| C1H9g03686 | 9:16,509,903-16,515,489 | - | C2H9g15804 | CX9g055005 | LOC_Os09g33680 | Os09g0511600 | - | Detail |
| C1H9g02461 | 9:16,518,528-16,523,572 | - | C2H9g00008 | CX9g057948 | LOC_Os09g33690 | Os09g0511700 | - | Detail |
| C1H9g16548 | 9:16,536,987-16,542,216 | - | C2H9g13098 | CX9g058029 | LOC_Os09g33710 | Os09g0511900 | Os9BGlu33 | Detail |
| C1H9g24289 | 9:16,544,410-16,546,557 | + | C2H9g16266 | CX9g057810 | LOC_Os09g33720 | Os09g0512000 | - | Detail |
| C1H9g03253 | 9:16,548,651-16,552,227 | + | C2H9g23608 | CX9g056420 | LOC_Os09g33780 | Os09g0512700 | OsFes1C | Detail |
| C1H9g01992 | 9:16,554,655-16,556,893 | + | C2H9g10289 | CX9g055941 | LOC_Os09g33790 | Os09g0512800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g18711 | 2:13,171,299-13,179,893 | - | C1H2g07452 | CX2g024420 | LOC_Os02g23890 | Os02g0435000 | - | Detail |
| C2H2g25774 | 2:13,199,240-13,204,190 | + | - | - | LOC_Os02g23910 | - | - | Detail |
| C2H2g25917 | 2:13,205,242-13,205,682 | - | C1H2g02528 | CX2g020713 | - | Os02g0648300 | - | Detail |
| C2H2g04002 | 2:13,206,741-13,207,078 | - | C1H2g24992 | - | - | - | - | Detail |
| C2H2g24592 | 2:13,247,946-13,253,676 | - | C1H2g19989 | CX2g022319 | LOC_Os02g24020 | Os02g0436400 | - | Detail |
| C2H2g09097 | 2:13,256,192-13,257,542 | - | C1H2g08387 | CX2g021272 | - | - | - | Detail |
| C2H2g15039 | 2:13,257,847-13,258,113 | - | - | CX2g023042 | - | Os08g0169100 | - | Detail |
| C2H2g20487 | 2:13,291,259-13,293,916 | - | C1H2g30293 | CX2g019461 | LOC_Os02g18370 | Os02g0202800 | - | Detail |
| C2H2g30166 | 2:13,298,474-13,300,382 | - | C1H2g12701 | CX2g023154 | LOC_Os02g24080 | Os02g0437200 | OsSNAP32 | Detail |
| C2H2g30682 | 2:13,306,552-13,307,907 | - | C1H2g31865 | CX2g023154 | LOC_Os02g24090 | - | - | Detail |
| C2H2g26069 | 2:13,315,413-13,316,579 | - | C1H2g18601 | - | - | - | - | Detail |
| C2H2g18328 | 2:13,340,526-13,350,242 | - | C1H2g25955 | CX2g019441 | LOC_Os02g24134 | Os02g0437800 | - | Detail |
| C2H2g19520 | 2:13,355,005-13,355,731 | - | C1H2g25763 | CX2g024815 | - | Os02g0437901 | - | Detail |
| C2H2g14037 | 2:13,355,796-13,356,028 | + | - | - | - | - | - | Detail |
| C2H2g14432 | 2:13,369,930-13,376,968 | + | C1H2g02666 | CX2g022081 | LOC_Os02g24190 | Os02g0438200 | - | Detail |
| C2H2g27447 | 2:13,392,898-13,393,173 | + | - | CX2g024925 | LOC_Os02g24240 | Os02g0438900 | - | Detail |
| C2H2g07242 | 2:13,399,065-13,402,059 | + | C1H2g26106 | CX2g022753 | LOC_Os02g24270 | Os02g0439200 | - | Detail |
| C2H2g02237 | 2:13,453,425-13,457,062 | + | C1H2g09626 | CX2g021247 | LOC_Os02g24330 | Os02g0439700 | - | Detail |
| C2H2g11615 | 2:13,461,968-13,469,588 | - | C1H2g03315 | CX2g022988 | LOC_Os02g24354 | Os02g0440000 | - | Detail |
| C2H2g16449 | 2:13,509,814-13,513,587 | + | C1H2g16189 | CX2g024915 | LOC_Os02g24430 | Os02g0440900 | OsSec14-8 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |