| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g17584 | 9:16,227,376-16,231,932 | - | C2H9g17089 | CX9g056383 | LOC_Os09g32840 | Os09g0506000 | - | Detail |
| C1H9g11480 | 9:16,232,588-16,233,674 | - | C2H9g19754 | CX9g056383 | LOC_Os09g32850 | Os09g0506000 | - | Detail |
| C1H9g02458 | 9:16,243,775-16,251,404 | + | C2H9g05876 | CX9g057776 | LOC_Os09g32930 | Os09g0506800 | PAIR2 | Detail |
| C1H9g22232 | 9:16,253,974-16,257,754 | + | C2H9g29007 | CX9g055013 | LOC_Os09g32940 | Os09g0506900 | - | Detail |
| C1H9g22572 | 9:16,278,858-16,283,611 | + | C2H9g16087 | CX9g055627 | LOC_Os09g32944 | Os09g0507100 | OsSPL18 | Detail |
| C1H9g01976 | 9:16,292,089-16,298,116 | + | C2H9g24094 | CX9g055656 | LOC_Os09g32948 | Os09g0507200 | OsMADS8, OsMADS8/24, DTE9 | Detail |
| C1H9g31066 | 9:16,300,450-16,302,607 | + | C2H9g09810 | CX9g056723 | LOC_Os09g32952 | Os09g0507300 | OsAAO5 | Detail |
| C1H9g29777 | 9:16,309,681-16,311,328 | + | C2H9g27580 | CX9g056857 | LOC_Os09g32960 | Os09g0507400 | - | Detail |
| C1H9g05594 | 9:16,312,804-16,315,162 | - | C2H9g28610 | CX9g058089 | LOC_Os09g32964 | Os09g0507500 | - | Detail |
| C1H9g16500 | 9:16,316,280-16,318,154 | - | C2H9g13596 | CX9g056931 | LOC_Os09g32968 | Os09g0507600 | - | Detail |
| C1H9g04875 | 9:16,319,832-16,321,966 | - | C2H9g15981 | CX9g056180 | LOC_Os09g32976 | Os09g0507800 | - | Detail |
| C1H9g11387 | 9:16,330,137-16,332,059 | - | C2H9g02236 | CX9g056378 | LOC_Os09g32988 | Os09g0508200 | - | Detail |
| C1H9g14135 | 9:16,332,984-16,337,749 | - | C2H9g17381 | CX9g057787 | LOC_Os08g42350 | Os09g0508250 | - | Detail |
| C1H9g15525 | 9:16,338,424-16,342,156 | - | C2H9g06782 | CX9g057936 | LOC_Os09g33450 | Os09g0508300 | - | Detail |
| C1H9g13578 | 9:16,342,199-16,342,928 | - | C2H9g02430 | - | - | - | - | Detail |
| C1H9g29300 | 9:16,346,052-16,347,908 | + | C2H9g16760 | CX9g056507 | LOC_Os09g33460 | Os09g0508500 | - | Detail |
| C1H9g31398 | 9:16,362,768-16,364,213 | - | C2H9g18629 | CX9g056683 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C1H9g16740 | 9:16,364,627-16,372,015 | - | C2H9g21730 | CX9g057080 | LOC_Os09g33470 | Os09g0508900 | - | Detail |
| C1H9g22826 | 9:16,373,717-16,377,102 | - | C2H9g21730 | CX9g057446 | LOC_Os09g33480 | Os09g0509000 | OsMORF8-2 | Detail |
| C1H9g05421 | 9:16,385,809-16,387,167 | + | C2H9g10967 | CX9g057327 | LOC_Os09g33490 | Os09g0509100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g00672 | 4:28,037,148-28,037,669 | + | C1H4g24297 | CX4g036167 | LOC_Os04g54490 | Os04g0637300 | OsEFP1 | Detail |
| C2H4g25987 | 4:28,039,150-28,046,123 | + | C1H4g14745 | CX4g032005 | LOC_Os04g54500 | Os04g0637400 | - | Detail |
| C2H4g06557 | 4:28,046,949-28,048,130 | - | - | CX4g033635 | LOC_Os04g54510 | Os04g0637500 | - | Detail |
| C2H4g09556 | 4:28,050,110-28,051,788 | - | C1H4g12494 | CX4g033634 | LOC_Os04g54560 | Os04g0638100 | - | Detail |
| C2H4g25620 | 4:28,058,701-28,059,329 | + | - | - | LOC_Os04g54580 | Os04g0638600 | - | Detail |
| C2H4g03681 | 4:28,061,423-28,062,128 | - | C1H4g04104 | CX4g031761 | LOC_Os04g54590 | Os04g0638700 | - | Detail |
| C2H4g26056 | 4:28,066,576-28,067,829 | + | - | CX4g033870 | LOC_Os04g54600 | Os04g0638800 | - | Detail |
| C2H4g04397 | 4:28,074,207-28,074,501 | + | C1H4g09803 | CX4g035252 | LOC_Os04g54610 | Os04g0639000 | - | Detail |
| C2H4g07968 | 4:28,076,928-28,077,391 | + | C1H4g30992 | CX4g036497 | LOC_Os04g54620 | Os04g0639100 | - | Detail |
| C2H4g28500 | 4:28,078,919-28,079,625 | + | C1H4g10736 | CX4g033211 | LOC_Os04g54630 | Os04g0639200 | - | Detail |
| C2H4g06202 | 4:28,081,116-28,083,456 | - | C1H4g01091 | CX4g034099 | LOC_Os04g54640 | Os04g0639300 | - | Detail |
| C2H4g15533 | 4:28,084,442-28,086,522 | - | C1H4g07903 | CX4g031964 | LOC_Os04g54759 | Os04g0640300 | - | Detail |
| C2H4g02260 | 4:28,095,354-28,103,287 | + | C1H4g22371 | CX4g036105 | LOC_Os04g54790 | Os04g0640500 | - | Detail |
| C2H4g05866 | 4:28,104,297-28,107,377 | - | C1H4g26128 | CX4g035804 | LOC_Os04g54800 | Os04g0640600 | OsSK3 | Detail |
| C2H4g10958 | 4:28,111,135-28,119,676 | - | C1H4g06695 | CX4g034360 | LOC_Os04g54810 | Os04g0640700 | - | Detail |
| C2H4g21502 | 4:28,126,150-28,128,507 | + | C1H4g02933 | CX4g032330 | LOC_Os04g54820 | Os04g0640800 | - | Detail |
| C2H4g09058 | 4:28,132,202-28,134,115 | + | C1H4g23002 | CX4g031558 | LOC_Os04g54830 | Os04g0640900 | - | Detail |
| C2H4g03331 | 4:28,135,283-28,144,371 | + | C1H4g19943 | CX4g032488 | LOC_Os04g54840 | Os04g0641000 | - | Detail |
| C2H4g03113 | 4:28,152,020-28,155,633 | + | C1H4g28360 | CX4g034640 | LOC_Os04g54850 | Os04g0641200 | - | Detail |
| C2H4g09489 | 4:28,158,629-28,159,960 | + | - | CX4g033359 | LOC_Os04g54860 | Os04g0641300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |