| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g17584 | 9:16,227,376-16,231,932 | - | C2H9g17089 | CX9g056383 | LOC_Os09g32840 | Os09g0506000 | - | Detail |
| C1H9g11480 | 9:16,232,588-16,233,674 | - | C2H9g19754 | CX9g056383 | LOC_Os09g32850 | Os09g0506000 | - | Detail |
| C1H9g02458 | 9:16,243,775-16,251,404 | + | C2H9g05876 | CX9g057776 | LOC_Os09g32930 | Os09g0506800 | PAIR2 | Detail |
| C1H9g22232 | 9:16,253,974-16,257,754 | + | C2H9g29007 | CX9g055013 | LOC_Os09g32940 | Os09g0506900 | - | Detail |
| C1H9g22572 | 9:16,278,858-16,283,611 | + | C2H9g16087 | CX9g055627 | LOC_Os09g32944 | Os09g0507100 | OsSPL18 | Detail |
| C1H9g01976 | 9:16,292,089-16,298,116 | + | C2H9g24094 | CX9g055656 | LOC_Os09g32948 | Os09g0507200 | OsMADS8, OsMADS8/24, DTE9 | Detail |
| C1H9g31066 | 9:16,300,450-16,302,607 | + | C2H9g09810 | CX9g056723 | LOC_Os09g32952 | Os09g0507300 | OsAAO5 | Detail |
| C1H9g29777 | 9:16,309,681-16,311,328 | + | C2H9g27580 | CX9g056857 | LOC_Os09g32960 | Os09g0507400 | - | Detail |
| C1H9g05594 | 9:16,312,804-16,315,162 | - | C2H9g28610 | CX9g058089 | LOC_Os09g32964 | Os09g0507500 | - | Detail |
| C1H9g16500 | 9:16,316,280-16,318,154 | - | C2H9g13596 | CX9g056931 | LOC_Os09g32968 | Os09g0507600 | - | Detail |
| C1H9g04875 | 9:16,319,832-16,321,966 | - | C2H9g15981 | CX9g056180 | LOC_Os09g32976 | Os09g0507800 | - | Detail |
| C1H9g11387 | 9:16,330,137-16,332,059 | - | C2H9g02236 | CX9g056378 | LOC_Os09g32988 | Os09g0508200 | - | Detail |
| C1H9g14135 | 9:16,332,984-16,337,749 | - | C2H9g17381 | CX9g057787 | LOC_Os08g42350 | Os09g0508250 | - | Detail |
| C1H9g15525 | 9:16,338,424-16,342,156 | - | C2H9g06782 | CX9g057936 | LOC_Os09g33450 | Os09g0508300 | - | Detail |
| C1H9g13578 | 9:16,342,199-16,342,928 | - | C2H9g02430 | - | - | - | - | Detail |
| C1H9g29300 | 9:16,346,052-16,347,908 | + | C2H9g16760 | CX9g056507 | LOC_Os09g33460 | Os09g0508500 | - | Detail |
| C1H9g31398 | 9:16,362,768-16,364,213 | - | C2H9g18629 | CX9g056683 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C1H9g16740 | 9:16,364,627-16,372,015 | - | C2H9g21730 | CX9g057080 | LOC_Os09g33470 | Os09g0508900 | - | Detail |
| C1H9g22826 | 9:16,373,717-16,377,102 | - | C2H9g21730 | CX9g057446 | LOC_Os09g33480 | Os09g0509000 | OsMORF8-2 | Detail |
| C1H9g05421 | 9:16,385,809-16,387,167 | + | C2H9g10967 | CX9g057327 | LOC_Os09g33490 | Os09g0509100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g27269 | 4:24,863,290-24,863,655 | + | - | - | LOC_Os04g48380 | Os04g0572800 | - | Detail |
| C2H4g30282 | 4:24,870,813-24,877,467 | + | C1H4g21662 | CX4g034449 | LOC_Os04g48390 | Os04g0573000 | OsSPX-MFS1 | Detail |
| C2H4g07007 | 4:24,878,384-24,880,527 | + | C1H4g12510 | CX4g032073 | LOC_Os04g48400 | Os04g0573100 | HTH1 | Detail |
| C2H4g10763 | 4:24,882,550-24,887,003 | + | C1H4g01592 | CX4g035514 | LOC_Os04g48410 | Os04g0573200 | - | Detail |
| C2H4g08356 | 4:24,887,272-24,889,602 | - | C1H4g07049 | CX4g035499 | LOC_Os04g48416 | Os04g0573300 | - | Detail |
| C2H4g12182 | 4:24,898,008-24,900,207 | + | C1H4g05653 | CX4g034878 | LOC_Os04g48460 | Os04g0573900 | - | Detail |
| C2H4g14493 | 4:24,910,725-24,912,152 | + | C1H4g12548 | CX4g035668 | LOC_Os04g48480 | Os04g0574100 | - | Detail |
| C2H4g03872 | 4:24,918,770-24,920,065 | - | C1H4g09417 | CX4g036279 | LOC_Os04g48490 | Os04g0574200 | OsFLA1 | Detail |
| C2H4g22486 | 4:24,927,209-24,927,648 | - | - | CX4g033670 | LOC_Os05g28404 | - | - | Detail |
| C2H4g11700 | 4:24,937,333-24,937,554 | - | C1H3g14582 | CX1g006618 | - | Os02g0324200 | - | Detail |
| C2H4g27073 | 4:24,937,581-24,938,089 | - | C1H3g29239 | CX4g033302 | - | - | - | Detail |
| C2H4g16583 | 4:24,942,398-24,942,900 | - | C1H4g04086 | - | - | - | - | Detail |
| C2H4g07929 | 4:24,944,660-24,945,401 | + | C1H4g09609 | CX4g033081 | LOC_Os04g48510 | Os04g0574500 | - | Detail |
| C2H4g17075 | 4:24,947,503-24,952,314 | + | C1H4g00913 | CX4g034718 | LOC_Os04g48520 | Os04g0574600 | - | Detail |
| C2H4g08470 | 4:24,953,036-24,955,186 | + | C1H4g00913 | CX4g033136 | LOC_Os04g48530 | Os04g0574700 | SLAC1, OsSLAC1 | Detail |
| C2H4g06957 | 4:24,955,224-24,957,831 | - | C1H4g26247 | CX4g035550 | LOC_Os04g48540 | Os04g0574800 | DHDPS1 | Detail |
| C2H4g16763 | 4:24,958,429-24,959,043 | + | - | - | - | - | - | Detail |
| C2H4g17330 | 4:24,959,869-24,962,605 | + | C1H4g15551 | CX4g033751 | LOC_Os04g48730 | Os04g0576700 | - | Detail |
| C2H4g28918 | 4:24,964,646-24,969,052 | + | C1H4g16511 | CX4g031926 | LOC_Os04g48750 | Os04g0576800 | - | Detail |
| C2H4g04514 | 4:24,974,693-24,978,166 | + | C1H4g27190 | CX4g032543 | LOC_Os04g48760 | Os04g0576900 | XIAO | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |