| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g17584 | 9:16,227,376-16,231,932 | - | C2H9g17089 | CX9g056383 | LOC_Os09g32840 | Os09g0506000 | - | Detail |
| C1H9g11480 | 9:16,232,588-16,233,674 | - | C2H9g19754 | CX9g056383 | LOC_Os09g32850 | Os09g0506000 | - | Detail |
| C1H9g02458 | 9:16,243,775-16,251,404 | + | C2H9g05876 | CX9g057776 | LOC_Os09g32930 | Os09g0506800 | PAIR2 | Detail |
| C1H9g22232 | 9:16,253,974-16,257,754 | + | C2H9g29007 | CX9g055013 | LOC_Os09g32940 | Os09g0506900 | - | Detail |
| C1H9g22572 | 9:16,278,858-16,283,611 | + | C2H9g16087 | CX9g055627 | LOC_Os09g32944 | Os09g0507100 | OsSPL18 | Detail |
| C1H9g01976 | 9:16,292,089-16,298,116 | + | C2H9g24094 | CX9g055656 | LOC_Os09g32948 | Os09g0507200 | OsMADS8, OsMADS8/24, DTE9 | Detail |
| C1H9g31066 | 9:16,300,450-16,302,607 | + | C2H9g09810 | CX9g056723 | LOC_Os09g32952 | Os09g0507300 | OsAAO5 | Detail |
| C1H9g29777 | 9:16,309,681-16,311,328 | + | C2H9g27580 | CX9g056857 | LOC_Os09g32960 | Os09g0507400 | - | Detail |
| C1H9g05594 | 9:16,312,804-16,315,162 | - | C2H9g28610 | CX9g058089 | LOC_Os09g32964 | Os09g0507500 | - | Detail |
| C1H9g16500 | 9:16,316,280-16,318,154 | - | C2H9g13596 | CX9g056931 | LOC_Os09g32968 | Os09g0507600 | - | Detail |
| C1H9g04875 | 9:16,319,832-16,321,966 | - | C2H9g15981 | CX9g056180 | LOC_Os09g32976 | Os09g0507800 | - | Detail |
| C1H9g11387 | 9:16,330,137-16,332,059 | - | C2H9g02236 | CX9g056378 | LOC_Os09g32988 | Os09g0508200 | - | Detail |
| C1H9g14135 | 9:16,332,984-16,337,749 | - | C2H9g17381 | CX9g057787 | LOC_Os08g42350 | Os09g0508250 | - | Detail |
| C1H9g15525 | 9:16,338,424-16,342,156 | - | C2H9g06782 | CX9g057936 | LOC_Os09g33450 | Os09g0508300 | - | Detail |
| C1H9g13578 | 9:16,342,199-16,342,928 | - | C2H9g02430 | - | - | - | - | Detail |
| C1H9g29300 | 9:16,346,052-16,347,908 | + | C2H9g16760 | CX9g056507 | LOC_Os09g33460 | Os09g0508500 | - | Detail |
| C1H9g31398 | 9:16,362,768-16,364,213 | - | C2H9g18629 | CX9g056683 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C1H9g16740 | 9:16,364,627-16,372,015 | - | C2H9g21730 | CX9g057080 | LOC_Os09g33470 | Os09g0508900 | - | Detail |
| C1H9g22826 | 9:16,373,717-16,377,102 | - | C2H9g21730 | CX9g057446 | LOC_Os09g33480 | Os09g0509000 | OsMORF8-2 | Detail |
| C1H9g05421 | 9:16,385,809-16,387,167 | + | C2H9g10967 | CX9g057327 | LOC_Os09g33490 | Os09g0509100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g17785 | 2:20,131,408-20,134,698 | - | - | - | - | Os02g0562000 | - | Detail |
| C2H2g28464 | 2:20,131,535-20,132,407 | + | C1H2g29582 | CX2g024333 | LOC_Os02g35450 | Os02g0562100 | XRCC3 | Detail |
| C2H2g25054 | 2:20,139,439-20,144,972 | + | C1H2g02101 | CX2g024829 | LOC_Os02g35470 | Os02g0562300 | - | Detail |
| C2H2g26588 | 2:20,145,343-20,149,368 | - | - | CX2g023645 | LOC_Os02g35480 | Os02g0562400 | - | Detail |
| C2H2g29528 | 2:20,152,102-20,153,624 | - | C1H11g12795 | - | LOC_Os02g53020 | Os02g0181400 | - | Detail |
| C2H2g08496 | 2:20,154,741-20,159,212 | - | C1H2g13542 | CX2g022844 | LOC_Os02g35490 | Os02g0562600 | - | Detail |
| C2H2g13323 | 2:20,172,276-20,176,636 | + | C1H2g26275 | CX2g023726 | LOC_Os02g35500 | Os02g0562700 | - | Detail |
| C2H2g00364 | 2:20,186,825-20,187,973 | + | C1H2g07639 | CX2g022313 | LOC_Os02g35530 | Os02g0563000 | - | Detail |
| C2H2g24813 | 2:20,230,577-20,233,417 | - | C1H2g01238 | CX2g024419 | LOC_Os02g35590 | Os02g0564000 | OsGST2 | Detail |
| C2H2g14395 | 2:20,235,364-20,236,397 | + | C1H2g18288 | CX2g020609 | LOC_Os02g35600 | Os02g0564100 | - | Detail |
| C2H2g18420 | 2:20,240,004-20,242,123 | + | - | CX2g024095 | LOC_Os02g35610 | Os02g0564200 | - | Detail |
| C2H2g28792 | 2:20,247,679-20,253,627 | + | C1H2g00388 | CX2g019190 | LOC_Os02g35630 | Os02g0564400 | - | Detail |
| C2H2g16722 | 2:20,253,311-20,256,580 | - | C1H2g27367 | CX2g020979 | LOC_Os02g35640 | Os02g0564500 | - | Detail |
| C2H2g20214 | 2:20,257,195-20,257,593 | + | C1H2g03776 | CX2g023702 | LOC_Os02g35650 | Os02g0564600 | - | Detail |
| C2H2g05354 | 2:20,258,340-20,261,138 | - | C1H2g14094 | CX2g021611 | LOC_Os02g35660 | Os02g0564700 | - | Detail |
| C2H2g05418 | 2:20,267,626-20,269,791 | - | C1H2g29150 | CX2g020663 | LOC_Os02g35690 | Os02g0565000 | - | Detail |
| C2H2g13608 | 2:20,274,302-20,276,574 | + | C1H2g29731 | CX2g019138 | LOC_Os02g35700 | Os02g0565100 | - | Detail |
| C2H2g29068 | 2:20,283,657-20,285,660 | - | C1H2g18157 | CX2g020892 | LOC_Os02g35720 | Os02g0565200 | - | Detail |
| C2H2g23153 | 2:20,285,690-20,292,757 | + | - | - | - | - | - | Detail |
| C2H2g18407 | 2:20,296,349-20,297,601 | - | C1H6g10318 | CX2g024793 | LOC_Os05g02720 | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |