| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g17584 | 9:16,227,376-16,231,932 | - | C2H9g17089 | CX9g056383 | LOC_Os09g32840 | Os09g0506000 | - | Detail |
| C1H9g11480 | 9:16,232,588-16,233,674 | - | C2H9g19754 | CX9g056383 | LOC_Os09g32850 | Os09g0506000 | - | Detail |
| C1H9g02458 | 9:16,243,775-16,251,404 | + | C2H9g05876 | CX9g057776 | LOC_Os09g32930 | Os09g0506800 | PAIR2 | Detail |
| C1H9g22232 | 9:16,253,974-16,257,754 | + | C2H9g29007 | CX9g055013 | LOC_Os09g32940 | Os09g0506900 | - | Detail |
| C1H9g22572 | 9:16,278,858-16,283,611 | + | C2H9g16087 | CX9g055627 | LOC_Os09g32944 | Os09g0507100 | OsSPL18 | Detail |
| C1H9g01976 | 9:16,292,089-16,298,116 | + | C2H9g24094 | CX9g055656 | LOC_Os09g32948 | Os09g0507200 | OsMADS8, OsMADS8/24, DTE9 | Detail |
| C1H9g31066 | 9:16,300,450-16,302,607 | + | C2H9g09810 | CX9g056723 | LOC_Os09g32952 | Os09g0507300 | OsAAO5 | Detail |
| C1H9g29777 | 9:16,309,681-16,311,328 | + | C2H9g27580 | CX9g056857 | LOC_Os09g32960 | Os09g0507400 | - | Detail |
| C1H9g05594 | 9:16,312,804-16,315,162 | - | C2H9g28610 | CX9g058089 | LOC_Os09g32964 | Os09g0507500 | - | Detail |
| C1H9g16500 | 9:16,316,280-16,318,154 | - | C2H9g13596 | CX9g056931 | LOC_Os09g32968 | Os09g0507600 | - | Detail |
| C1H9g04875 | 9:16,319,832-16,321,966 | - | C2H9g15981 | CX9g056180 | LOC_Os09g32976 | Os09g0507800 | - | Detail |
| C1H9g11387 | 9:16,330,137-16,332,059 | - | C2H9g02236 | CX9g056378 | LOC_Os09g32988 | Os09g0508200 | - | Detail |
| C1H9g14135 | 9:16,332,984-16,337,749 | - | C2H9g17381 | CX9g057787 | LOC_Os08g42350 | Os09g0508250 | - | Detail |
| C1H9g15525 | 9:16,338,424-16,342,156 | - | C2H9g06782 | CX9g057936 | LOC_Os09g33450 | Os09g0508300 | - | Detail |
| C1H9g13578 | 9:16,342,199-16,342,928 | - | C2H9g02430 | - | - | - | - | Detail |
| C1H9g29300 | 9:16,346,052-16,347,908 | + | C2H9g16760 | CX9g056507 | LOC_Os09g33460 | Os09g0508500 | - | Detail |
| C1H9g31398 | 9:16,362,768-16,364,213 | - | C2H9g18629 | CX9g056683 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C1H9g16740 | 9:16,364,627-16,372,015 | - | C2H9g21730 | CX9g057080 | LOC_Os09g33470 | Os09g0508900 | - | Detail |
| C1H9g22826 | 9:16,373,717-16,377,102 | - | C2H9g21730 | CX9g057446 | LOC_Os09g33480 | Os09g0509000 | OsMORF8-2 | Detail |
| C1H9g05421 | 9:16,385,809-16,387,167 | + | C2H9g10967 | CX9g057327 | LOC_Os09g33490 | Os09g0509100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g11754 | 1:31,664,071-31,668,463 | + | C1H1g15578 | CX1g001115 | LOC_Os01g61830 | Os01g0834700 | - | Detail |
| C2H1g04024 | 1:31,671,750-31,672,915 | - | C1H1g28438 | CX1g005583 | LOC_Os01g61840 | Os01g0834800 | - | Detail |
| C2H1g07677 | 1:31,680,907-31,690,138 | - | C1H1g29053 | CX1g004964 | LOC_Os01g61860 | Os01g0835000 | - | Detail |
| C2H1g02343 | 1:31,705,293-31,709,691 | + | C1H1g14368 | CX1g001158 | LOC_Os01g61880 | Os01g0835500 | - | Detail |
| C2H1g27745 | 1:31,720,413-31,721,614 | - | C1H1g23056 | CX1g000977 | LOC_Os01g61900 | Os01g0835700 | OsCCT01 | Detail |
| C2H1g21602 | 1:31,725,912-31,729,228 | - | C1H1g04133 | CX1g007240 | LOC_Os01g61910 | Os01g0835800 | - | Detail |
| C2H1g23810 | 1:31,737,549-31,737,794 | + | - | - | - | - | - | Detail |
| C2H1g29300 | 1:31,738,786-31,748,396 | + | C1H1g12123 | CX1g000993 | LOC_Os01g61930 | - | - | Detail |
| C2H1g15144 | 1:31,763,529-31,764,278 | - | C1H1g04982 | - | LOC_Os01g61950 | - | - | Detail |
| C2H1g29885 | 1:31,765,649-31,766,863 | - | C1H1g15863 | CX1g001966 | LOC_Os01g61960 | Os01g0836700 | - | Detail |
| C2H1g06537 | 1:31,783,539-31,786,652 | - | C1H1g22081 | CX1g004745 | LOC_Os01g61990 | Os01g0837000 | - | Detail |
| C2H1g25983 | 1:31,788,385-31,789,795 | + | C1H1g08351 | CX1g000248 | LOC_Os01g62000 | Os01g0837100 | OsPLL2 | Detail |
| C2H1g10234 | 1:31,789,909-31,792,207 | + | C1H1g29335 | CX1g003679 | LOC_Os01g62010 | Os01g0837200 | - | Detail |
| C2H1g23741 | 1:31,793,893-31,797,615 | + | C1H1g10810 | CX1g003883 | LOC_Os01g62020 | Os01g0837300 | OsUXS4 | Detail |
| C2H1g07218 | 1:31,799,152-31,804,468 | + | C1H1g12894 | CX1g001070 | LOC_Os01g62040 | Os01g0837500 | - | Detail |
| C2H1g26587 | 1:31,808,511-31,809,296 | + | C1H1g00961 | CX1g002011 | LOC_Os01g62060 | Os01g0837600 | DGP1 | Detail |
| C2H1g28819 | 1:31,818,681-31,823,341 | - | C1H1g29125 | CX1g002419 | LOC_Os01g62070 | Os01g0837800 | - | Detail |
| C2H1g16663 | 1:31,827,220-31,830,953 | - | C1H1g06942 | CX1g006172 | LOC_Os01g62080 | Os01g0837900 | - | Detail |
| C2H1g02384 | 1:31,851,338-31,854,908 | + | C1H1g29226 | CX1g002865 | LOC_Os05g38610 | Os01g0838800 | - | Detail |
| C2H1g20151 | 1:31,855,352-31,858,418 | - | C1H1g17733 | CX1g005211 | LOC_Os01g62160 | Os01g0838900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |