| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g29051 | 9:16,101,891-16,104,286 | - | C2H9g09442 | CX9g055341 | LOC_Os09g32610 | Os09g0502900 | - | Detail |
| C1H9g27895 | 9:16,108,452-16,109,786 | + | C2H9g03067 | CX9g055636 | LOC_Os09g32620 | Os09g0503000 | - | Detail |
| C1H9g22567 | 9:16,112,093-16,114,582 | + | C2H9g26652 | CX9g058014 | LOC_Os09g32640 | Os09g0503100 | - | Detail |
| C1H9g12902 | 9:16,115,459-16,120,530 | + | C2H9g20718 | CX9g055869 | LOC_Os09g32650 | Os09g0503400 | - | Detail |
| C1H9g11041 | 9:16,122,452-16,125,229 | - | C2H9g18609 | CX9g055215 | LOC_Os09g32660 | Os09g0503700 | - | Detail |
| C1H9g11647 | 9:16,133,443-16,136,491 | - | C2H9g25649 | CX9g055215 | LOC_Os09g32660 | Os09g0503700 | - | Detail |
| C1H9g05238 | 9:16,142,022-16,143,509 | - | C2H9g28414 | CX9g055153 | LOC_Os09g32670 | Os09g0504000 | - | Detail |
| C1H9g15461 | 9:16,154,229-16,158,070 | + | C2H9g28585 | CX9g056666 | LOC_Os09g32680 | Os09g0504400 | OsCycC | Detail |
| C1H9g24869 | 9:16,159,220-16,161,432 | - | C2H9g18502 | CX9g055615 | LOC_Os09g32690 | Os09g0504700 | - | Detail |
| C1H9g01645 | 9:16,162,548-16,164,608 | + | C2H9g07035 | CX9g055065 | LOC_Os09g32700 | Os09g0504800 | - | Detail |
| C1H9g24207 | 9:16,165,455-16,168,142 | - | C2H9g25198 | CX9g057729 | LOC_Os09g32710 | Os09g0504900 | - | Detail |
| C1H9g05583 | 9:16,172,355-16,173,002 | - | C2H8g08683 | CX9g056602 | LOC_Os09g32730 | Os09g0505000 | - | Detail |
| C1H9g18162 | 9:16,174,906-16,180,480 | - | C2H9g10527 | CX9g056102 | LOC_Os09g32740 | Os09g0505100 | OsLMP1 | Detail |
| C1H9g22641 | 9:16,188,224-16,192,611 | + | C2H9g09607 | CX9g056649 | LOC_Os09g32750 | Os09g0505200 | - | Detail |
| C1H9g03482 | 9:16,192,590-16,196,611 | - | C2H9g21366 | CX9g055713 | LOC_Os09g32760 | Os09g0505300 | - | Detail |
| C1H9g24687 | 9:16,200,507-16,203,120 | - | C2H9g12699 | CX9g056695 | LOC_Os09g32770 | Os09g0505400 | - | Detail |
| C1H9g26041 | 9:16,206,688-16,209,872 | + | C2H9g11822 | CX9g056682 | LOC_Os09g32800 | Os09g0505600 | - | Detail |
| C1H9g06786 | 9:16,211,141-16,215,158 | + | - | - | - | - | - | Detail |
| C1H9g21392 | 9:16,216,148-16,221,718 | + | C2H9g24671 | CX9g056458 | LOC_Os09g32820 | Os09g0505800 | - | Detail |
| C1H9g14148 | 9:16,223,441-16,226,949 | + | C2H9g08120 | CX9g057123 | LOC_Os09g32830 | Os09g0505900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02353 | 1:11,674,300-11,679,910 | + | C1H1g28713 | CX1g000663 | LOC_Os01g24060 | Os01g0343200 | - | Detail |
| C2H1g26949 | 1:11,685,554-11,687,349 | + | C1H1g18384 | CX1g001080 | LOC_Os01g24070 | Os01g0343300 | OsGATA8 | Detail |
| C2H1g05738 | 1:11,696,982-11,699,421 | - | C1H1g01015 | CX1g003896 | LOC_Os01g24090 | Os01g0343500 | - | Detail |
| C2H1g07085 | 1:11,827,376-11,830,076 | + | - | - | LOC_Os01g27449 | Os01g0372100 | - | Detail |
| C2H1g16748 | 1:11,899,919-11,901,719 | - | C1H1g27053 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C2H1g05112 | 1:11,937,505-11,943,811 | + | C1H1g27449 | CX1g005895 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C2H1g30571 | 1:11,948,445-11,952,134 | - | C1H1g01597 | CX1g001516 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C2H1g15253 | 1:11,954,093-11,955,767 | - | - | - | - | - | - | Detail |
| C2H1g16729 | 1:11,956,738-11,959,165 | - | - | - | - | - | - | Detail |
| C2H1g03429 | 1:12,036,103-12,038,238 | + | C1H1g12059 | CX1g004622 | LOC_Os01g26980 | Os01g0738500 | - | Detail |
| C2H1g13415 | 1:12,067,581-12,069,632 | + | C1H1g13768 | CX1g001811 | - | Os01g0527900 | - | Detail |
| C2H1g07465 | 1:12,086,685-12,087,860 | + | C1H1g21970 | CX1g002117 | LOC_Os01g24420 | Os01g0346250 | - | Detail |
| C2H1g25406 | 1:12,110,695-12,115,118 | + | C1H1g27382 | CX1g002994 | LOC_Os01g24470 | Os01g0347000 | - | Detail |
| C2H1g02246 | 1:12,115,613-12,120,143 | - | C1H1g08071 | CX1g000129 | LOC_Os01g24480 | Os01g0347100 | - | Detail |
| C2H1g19331 | 1:12,125,101-12,126,796 | - | C1H1g27053 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C2H1g13817 | 1:12,132,010-12,134,037 | + | C1H1g27449 | CX1g006871 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C2H1g12753 | 1:12,181,907-12,186,318 | - | C1H1g04145 | CX1g004547 | - | Os01g0852650 | - | Detail |
| C2H1g06141 | 1:12,187,581-12,188,746 | - | C1H1g09482 | CX1g001042 | LOC_Os01g24600 | Os01g0347500 | - | Detail |
| C2H1g29017 | 1:12,191,860-12,192,978 | + | C1H1g19481 | CX1g002830 | LOC_Os01g24560 | Os01g0347600 | - | Detail |
| C2H1g00502 | 1:12,208,552-12,209,729 | + | C1H1g19455 | CX1g004946 | LOC_Os01g24550 | Os01g0348000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |