| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g27371 | 9:15,998,078-16,000,225 | + | - | CX9g057337 | LOC_Os09g32370 | Os09g0499500 | - | Detail |
| C1H9g11515 | 9:16,000,732-16,004,589 | - | C2H9g15486 | CX9g056637 | LOC_Os09g32380 | Os09g0499600 | - | Detail |
| C1H9g14204 | 9:16,004,847-16,007,687 | - | C2H9g14862 | CX9g055955 | LOC_Os09g32400 | Os09g0503700 | - | Detail |
| C1H9g03497 | 9:16,010,122-16,012,566 | - | C2H9g30463 | CX9g055955 | LOC_Os09g32410 | Os09g0500100 | - | Detail |
| C1H9g18383 | 9:16,013,035-16,013,538 | - | - | CX9g055770 | - | Os09g0500151 | - | Detail |
| C1H9g08634 | 9:16,015,861-16,018,523 | - | C2H9g09805 | CX9g057000 | LOC_Os09g32430 | Os09g0500200 | - | Detail |
| C1H9g11307 | 9:16,020,793-16,026,002 | + | C2H9g15110 | CX9g056675 | LOC_Os09g32440 | Os09g0500300 | - | Detail |
| C1H9g04482 | 9:16,026,909-16,035,037 | + | C2H9g01534 | CX9g054850 | LOC_Os09g32450 | Os09g0500600 | - | Detail |
| C1H9g28494 | 9:16,036,696-16,039,256 | - | C2H9g04091 | CX9g057355 | LOC_Os09g32470 | Os09g0500900 | - | Detail |
| C1H9g04226 | 9:16,045,843-16,046,637 | + | C2H9g04091 | CX9g057555 | LOC_Os09g32470 | Os09g0501100 | - | Detail |
| C1H9g20795 | 9:16,049,496-16,051,178 | + | C2H9g21146 | CX9g056949 | LOC_Os09g32532 | Os09g0502000 | - | Detail |
| C1H9g06581 | 9:16,057,203-16,058,955 | - | C2H9g26241 | CX9g056092 | LOC_Os09g32510 | Os09g0501600 | OsbHLH92, Lam1 | Detail |
| C1H9g28322 | 9:16,064,114-16,065,544 | - | C2H9g16977 | CX9g057819 | LOC_Os09g32532 | Os09g0501200 | - | Detail |
| C1H9g00140 | 9:16,066,137-16,068,744 | - | C2H9g27344 | CX9g054899 | LOC_Os09g32526 | Os09g0501850 | - | Detail |
| C1H9g25086 | 9:16,069,952-16,071,701 | - | C2H9g16977 | CX9g055348 | LOC_Os09g32532 | Os09g0502000 | - | Detail |
| C1H9g08567 | 9:16,074,572-16,080,642 | - | C2H9g09975 | CX9g055824 | LOC_Os09g32540 | Os09g0502100 | LGD1, LGD1.6 | Detail |
| C1H9g16225 | 9:16,083,493-16,088,487 | - | C2H9g02889 | CX9g056540 | LOC_Os09g32550 | Os09g0502200 | - | Detail |
| C1H9g10007 | 9:16,091,805-16,093,137 | + | C2H9g24651 | CX9g054956 | LOC_Os09g32570 | Os09g0502500 | - | Detail |
| C1H9g19163 | 9:16,094,003-16,096,378 | - | C2H9g09324 | CX9g055341 | LOC_Os09g32580 | Os09g0502600 | - | Detail |
| C1H9g15268 | 9:16,097,321-16,100,264 | - | C2H9g03031 | CX9g055341 | LOC_Os09g32600 | Os09g0502800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05108 | 3:4,707,270-4,710,116 | + | C1H3g14289 | CX3g026129 | LOC_Os03g10440 | Os03g0201500 | OsMORE1a | Detail |
| C2H3g04674 | 3:4,711,100-4,713,323 | - | C1H3g07517 | CX3g029780 | LOC_Os03g10450 | Os03g0201600 | - | Detail |
| C2H3g27684 | 3:4,714,151-4,716,867 | + | C1H3g08866 | CX3g025008 | LOC_Os03g10460 | Os03g0201700 | - | Detail |
| C2H3g15317 | 3:4,716,730-4,720,061 | - | C1H3g26823 | CX3g027908 | LOC_Os03g10469 | Os03g0201800 | - | Detail |
| C2H3g07444 | 3:4,720,624-4,725,054 | - | C1H3g22443 | CX3g027908 | LOC_Os03g10478 | Os03g0201901 | - | Detail |
| C2H3g09161 | 3:4,730,604-4,734,181 | - | C1H3g14443 | CX3g028036 | LOC_Os03g10500 | Os03g0202001 | - | Detail |
| C2H3g24025 | 3:4,736,414-4,740,022 | - | C1H3g22113 | CX3g026152 | LOC_Os03g10510 | Os03g0202200 | OsVDAC5 | Detail |
| C2H3g13194 | 3:4,741,051-4,745,017 | - | C1H3g27837 | CX3g030169 | LOC_Os03g10520 | Os03g0202300 | - | Detail |
| C2H3g17561 | 3:4,746,437-4,749,472 | - | C1H3g27666 | CX3g025689 | LOC_Os03g10590 | Os03g0203000 | - | Detail |
| C2H3g21513 | 3:4,752,859-4,759,444 | + | C1H3g27625 | CX3g029844 | LOC_Os03g10600 | Os03g0203100 | - | Detail |
| C2H3g08169 | 3:4,771,694-4,772,873 | + | C1H3g03653 | CX3g027943 | LOC_Os03g10620 | Os03g0203200 | D14, D88, D88/D14, qPPB3, HTD4 | Detail |
| C2H3g27974 | 3:4,783,031-4,789,961 | + | C1H3g22146 | CX3g027605 | LOC_Os03g10640 | Os03g0203700 | - | Detail |
| C2H3g08201 | 3:4,792,026-4,793,503 | - | C1H3g29891 | CX3g028482 | LOC_Os03g10650 | Os03g0203800 | - | Detail |
| C2H3g30001 | 3:4,812,950-4,817,305 | + | C1H3g06442 | CX3g026677 | LOC_Os03g10680 | Os03g0204100 | - | Detail |
| C2H3g23547 | 3:4,820,796-4,821,985 | + | C1H3g30369 | CX3g029117 | LOC_Os03g10730 | - | - | Detail |
| C2H3g15767 | 3:4,829,271-4,829,690 | - | C1H3g08546 | - | LOC_Os03g10710 | Os03g0204500 | - | Detail |
| C2H3g08384 | 3:4,832,991-4,834,679 | + | C1H3g00980 | CX3g029117 | LOC_Os03g10730 | - | - | Detail |
| C2H3g07827 | 3:4,838,784-4,841,678 | + | C1H3g16112 | CX3g030767 | LOC_Os03g10730 | Os03g0157000 | - | Detail |
| C2H3g15453 | 3:4,842,534-4,842,952 | - | C1H3g05329 | - | LOC_Os03g10740 | Os03g0204900 | - | Detail |
| C2H3g17885 | 3:4,844,672-4,850,468 | - | C1H3g13244 | CX3g028803 | LOC_Os03g10750 | Os03g0205000 | SPL35 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |