| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g15367 | 9:15,672,892-15,676,095 | - | C2H9g07920 | CX9g057938 | LOC_Os09g31486 | Os09g0491772 | - | Detail |
| C1H9g25553 | 9:15,677,383-15,679,448 | - | C2H9g15438 | CX9g057653 | LOC_Os09g31490 | Os09g0491788 | - | Detail |
| C1H9g03425 | 9:15,680,780-15,683,994 | - | C2H9g09940 | CX9g057653 | LOC_Os09g31502 | Os09g0491820 | - | Detail |
| C1H9g01398 | 9:15,685,789-15,688,373 | - | C2H9g25332 | CX9g057653 | LOC_Os09g31506 | Os09g0491852 | - | Detail |
| C1H9g14231 | 9:15,692,941-15,697,874 | - | C2H9g00263 | CX9g057653 | LOC_Os09g31514 | Os09g0491852 | - | Detail |
| C1H9g16336 | 9:15,701,234-15,704,275 | - | C2H9g02235 | - | LOC_Os09g31518 | Os09g0491868 | - | Detail |
| C1H9g09572 | 9:15,724,703-15,729,287 | + | C2H9g11657 | CX9g056412 | LOC_Os09g31970 | Os09g0492700 | - | Detail |
| C1H9g31554 | 9:15,735,062-15,735,730 | - | - | CX9g056484 | - | - | - | Detail |
| C1H9g23417 | 9:15,736,579-15,738,766 | - | C2H9g00529 | CX9g057184 | LOC_Os09g31980 | Os09g0492800 | - | Detail |
| C1H9g03738 | 9:15,744,909-15,745,460 | + | - | CX9g055195 | LOC_Os09g31990 | Os09g0492900 | - | Detail |
| C1H9g27035 | 9:15,750,346-15,750,951 | + | - | CX9g056117 | LOC_Os09g32000 | Os09g0493000 | - | Detail |
| C1H9g08449 | 9:15,759,336-15,764,272 | + | C2H9g18836 | CX9g057135 | LOC_Os09g32010 | Os09g0493400 | - | Detail |
| C1H9g12558 | 9:15,765,926-15,770,370 | - | C2H9g29348 | CX9g056463 | LOC_Os09g25150 | Os09g0127300 | OsCCR17 | Detail |
| C1H9g18719 | 9:15,770,976-15,772,492 | - | C2H9g29332 | CX9g056112 | LOC_Os09g32030 | Os09g0493600 | - | Detail |
| C1H9g30023 | 9:15,773,171-15,781,010 | - | C2H9g27466 | CX9g055946 | LOC_Os09g32040 | Os09g0493700 | OsNAC42, NAC42 | Detail |
| C1H9g21323 | 9:15,784,760-15,785,037 | - | - | CX9g055004 | - | - | - | Detail |
| C1H9g21461 | 9:15,801,934-15,803,626 | + | C2H9g06284 | CX9g056211 | LOC_Os09g32080 | Os09g0494200 | - | Detail |
| C1H9g30695 | 9:15,804,288-15,813,350 | - | C2H9g17609 | CX9g056184 | LOC_Os09g32090 | Os09g0494300 | - | Detail |
| C1H9g23333 | 9:15,822,738-15,823,621 | + | C2H9g28084 | CX9g055684 | LOC_Os09g32100 | Os09g0494600 | - | Detail |
| C1H9g03109 | 9:15,831,413-15,831,713 | - | C2H9g05758 | CX9g057501 | LOC_Os09g32180 | Os09g0494800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g05837 | 1:34,814,284-34,817,813 | - | C1H1g03400 | CX1g004760 | LOC_Os01g67770 | Os01g0904700 | RR26, OsRR26, Rrb6, Orr6, OsRR16, OsRRB6 | Detail |
| C2H1g29165 | 1:34,830,200-34,832,407 | + | C1H1g01129 | CX1g000275 | LOC_Os01g67810 | Os01g0905200 | - | Detail |
| C2H1g16521 | 1:34,833,811-34,835,983 | + | C1H1g31042 | CX1g001652 | LOC_Os01g67820 | Os01g0905300 | - | Detail |
| C2H1g29056 | 1:34,837,704-34,841,038 | - | C1H1g11384 | CX1g000161 | LOC_Os01g67830 | Os01g0905400 | - | Detail |
| C2H1g13823 | 1:34,849,593-34,852,389 | + | C1H1g03018 | CX1g004783 | LOC_Os01g67850 | Os01g0905700 | - | Detail |
| C2H1g10330 | 1:34,853,768-34,856,107 | - | C1H1g11811 | CX1g001709 | LOC_Os01g67860 | Os01g0905800 | - | Detail |
| C2H1g06722 | 1:34,859,001-34,864,128 | - | C1H1g06073 | CX1g001709 | LOC_Os01g67870 | Os01g0906000 | - | Detail |
| C2H1g09299 | 1:34,868,161-34,877,076 | - | C1H1g19357 | CX1g002463 | LOC_Os01g67880 | Os01g0906200 | - | Detail |
| C2H1g18200 | 1:34,880,705-34,886,760 | - | C1H1g19297 | CX1g003860 | LOC_Os01g67920 | Os01g0906600 | - | Detail |
| C2H1g20697 | 1:34,889,896-34,890,684 | + | C1H1g12726 | CX1g003493 | LOC_Os01g67950 | Os01g0907200 | - | Detail |
| C2H1g10610 | 1:34,893,569-34,898,685 | + | C1H1g26541 | CX1g004144 | LOC_Os01g67960 | Os01g0907300 | - | Detail |
| C2H1g19705 | 1:34,899,270-34,906,295 | + | C1H1g18538 | CX1g000822 | LOC_Os01g67970 | Os01g0907400 | JMJ705 | Detail |
| C2H1g19503 | 1:34,924,288-34,927,881 | + | C1H1g08768 | CX1g000912 | LOC_Os01g68000 | Os01g0907900 | PLA2, pla2, pla2(pla2-1, pla2-2), plt2, LHD2 | Detail |
| C2H1g14371 | 1:34,938,471-34,941,205 | - | C1H1g13810 | CX1g000788 | LOC_Os01g68010 | Os01g0908100 | - | Detail |
| C2H1g27794 | 1:34,944,440-34,948,560 | + | C1H1g00934 | CX1g002877 | LOC_Os01g68020 | Os01g0908200 | OsBT | Detail |
| C2H1g06918 | 1:34,949,685-34,950,957 | - | C1H1g26380 | CX1g005492 | LOC_Os01g68030 | Os01g0908400 | - | Detail |
| C2H1g30537 | 1:34,952,240-34,955,472 | - | C1H1g26157 | CX1g002681 | LOC_Os01g68040 | Os01g0908500 | - | Detail |
| C2H1g27819 | 1:34,962,221-34,964,922 | + | C1H1g02663 | CX1g003019 | LOC_Os01g68050 | Os01g0908600 | OsProT1 | Detail |
| C2H1g20684 | 1:34,965,284-34,969,654 | - | C1H1g28238 | CX1g003471 | LOC_Os01g68060 | Os01g0908700 | - | Detail |
| C2H1g29519 | 1:34,987,052-34,990,279 | + | C1H1g09218 | CX1g001897 | LOC_Os01g68104 | Os01g0909100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |