| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g09129 | 9:15,547,102-15,550,149 | + | C2H9g15092 | CX9g057575 | LOC_Os09g31360 | Os09g0488700 | - | Detail |
| C1H9g25625 | 9:15,550,558-15,552,998 | - | C2H9g21244 | CX9g057858 | LOC_Os09g31370 | Os09g0488800 | - | Detail |
| C1H9g15563 | 9:15,559,172-15,562,492 | - | C2H9g08351 | - | LOC_Os09g31380 | Os09g0489200 | - | Detail |
| C1H9g15715 | 9:15,563,088-15,564,179 | - | C2H9g08351 | - | LOC_Os09g31380 | Os09g0489200 | - | Detail |
| C1H9g18585 | 9:15,566,699-15,575,492 | - | C2H9g19815 | CX9g056203 | LOC_Os09g31390 | Os09g0489500 | - | Detail |
| C1H9g01154 | 9:15,581,255-15,584,780 | - | - | - | - | - | - | Detail |
| C1H9g02585 | 9:15,588,333-15,592,745 | - | C2H9g23216 | CX9g055344 | LOC_Os09g31410 | Os09g0490400 | - | Detail |
| C1H9g14314 | 9:15,599,104-15,602,465 | - | C2H9g07102 | CX9g055632 | LOC_Os09g31430 | Os09g0491100 | - | Detail |
| C1H9g17403 | 9:15,608,466-15,611,646 | - | C2H9g00506 | CX9g057163 | LOC_Os09g31438 | Os09g0491532 | OsSPL17 | Detail |
| C1H9g05651 | 9:15,629,117-15,629,659 | - | - | CX9g057353 | LOC_Os09g31446 | Os09g0491596 | - | Detail |
| C1H9g05729 | 9:15,634,659-15,635,681 | - | C2H9g06178 | CX9g055939 | LOC_Os09g31450 | Os09g0491612 | PGIP7, Ospgip7, pgip7, OsPGIP7 | Detail |
| C1H9g23839 | 9:15,635,820-15,638,326 | - | - | CX9g056573 | - | - | - | Detail |
| C1H9g24105 | 9:15,639,296-15,642,631 | - | C2H9g01096 | CX9g057982 | LOC_Os09g31454 | Os09g0491644 | - | Detail |
| C1H9g12273 | 9:15,643,672-15,644,775 | - | C2H8g25749 | CX9g054919 | LOC_Os09g31458 | Os09g0491676 | - | Detail |
| C1H9g11917 | 9:15,647,506-15,649,104 | - | C2H9g04680 | CX9g056061 | LOC_Os09g31466 | Os09g0491692 | - | Detail |
| C1H9g09934 | 9:15,649,836-15,653,670 | - | C2H9g19855 | CX9g056992 | LOC_Os09g31470 | Os09g0491708 | - | Detail |
| C1H9g15646 | 9:15,661,536-15,661,986 | + | - | - | - | - | - | Detail |
| C1H9g00130 | 9:15,662,145-15,662,522 | + | - | - | - | - | - | Detail |
| C1H9g14190 | 9:15,662,857-15,668,549 | - | C2H9g05034 | CX9g056060 | LOC_Os09g31478 | Os09g0491740 | - | Detail |
| C1H9g22948 | 9:15,671,131-15,672,003 | + | - | CX9g056126 | LOC_Os09g31482 | Os09g0491756 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06034 | 2:28,122,284-28,125,296 | + | C1H2g10371 | - | LOC_Os02g50174 | Os02g0734600 | - | Detail |
| C2H2g03591 | 2:28,129,987-28,131,627 | + | C1H2g11288 | - | LOC_Os02g50174 | Os02g0734600 | - | Detail |
| C2H2g11973 | 2:28,131,685-28,131,928 | + | - | - | - | - | - | Detail |
| C2H2g15749 | 2:28,133,825-28,134,655 | + | C1H2g29638 | CX2g023319 | LOC_Os02g50200 | Os02g0734800 | - | Detail |
| C2H2g13766 | 2:28,137,100-28,137,498 | + | - | - | LOC_Os02g50210 | Os02g0734900 | - | Detail |
| C2H2g24372 | 2:28,139,654-28,141,467 | + | C1H2g02030 | CX2g022067 | LOC_Os02g50220 | Os02g0735100 | - | Detail |
| C2H2g15743 | 2:28,145,048-28,148,684 | + | C1H2g29553 | CX2g022006 | LOC_Os02g50230 | Os02g0735100 | - | Detail |
| C2H2g04098 | 2:28,150,617-28,154,357 | - | C1H2g01228 | CX2g020555 | LOC_Os02g50240 | Os02g0735200 | - | Detail |
| C2H2g05950 | 2:28,163,367-28,164,218 | + | C1H2g08659 | CX2g023037 | LOC_Os02g50250 | - | - | Detail |
| C2H2g09760 | 2:28,166,241-28,169,353 | + | C1H2g20929 | CX2g023940 | - | - | - | Detail |
| C2H2g19052 | 2:28,171,144-28,171,992 | + | C1H2g08659 | CX2g024168 | LOC_Os02g50250 | - | - | Detail |
| C2H2g13627 | 2:28,173,614-28,176,698 | + | C1H2g07791 | CX2g019816 | LOC_Os02g50270 | Os02g0735700 | - | Detail |
| C2H2g15470 | 2:28,177,406-28,179,337 | + | C1H2g05849 | CX2g019477 | LOC_Os02g50280 | Os02g0735800 | - | Detail |
| C2H2g10624 | 2:28,180,688-28,182,752 | - | C1H2g22855 | CX2g023040 | LOC_Os02g50290 | Os02g0735900 | - | Detail |
| C2H2g27320 | 2:28,194,605-28,199,858 | + | C1H2g03349 | CX2g019949 | LOC_Os02g50320 | Os02g0736100 | - | Detail |
| C2H2g10188 | 2:28,203,195-28,211,380 | + | C1H2g05522 | CX2g021853 | LOC_Os02g50330 | Os02g0736200 | RDR1, OsRDR1 | Detail |
| C2H2g27537 | 2:28,211,359-28,217,828 | - | C1H2g23012 | CX2g019081 | LOC_Os02g50340 | Os02g0736300 | - | Detail |
| C2H2g19993 | 2:28,219,241-28,223,033 | - | C1H2g06623 | CX2g021694 | LOC_Os02g50350 | Os02g0736400 | OsDHODH1 | Detail |
| C2H2g07436 | 2:28,224,254-28,230,148 | - | C1H2g07187 | CX2g020413 | LOC_Os02g50360 | Os02g0736500 | - | Detail |
| C2H2g04852 | 2:28,230,066-28,236,442 | + | C1H2g10005 | CX2g023479 | LOC_Os02g50370 | Os02g0736600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |