| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g22239 | 9:15,387,857-15,388,476 | + | - | CX9g056123 | - | - | - | Detail |
| C1H9g10463 | 9:15,390,930-15,396,579 | - | C2H9g25938 | CX9g055724 | LOC_Os09g31090 | Os09g0484300 | - | Detail |
| C1H9g25991 | 9:15,404,902-15,405,309 | + | - | CX9g056981 | LOC_Os09g31100 | - | - | Detail |
| C1H9g21053 | 9:15,411,915-15,412,343 | + | C2H9g09529 | CX9g056137 | LOC_Os09g31120 | Os09g0484800 | - | Detail |
| C1H9g25716 | 9:15,412,962-15,413,769 | + | C2H9g09529 | CX9g056137 | LOC_Os09g31120 | Os09g0484800 | - | Detail |
| C1H9g21552 | 9:15,420,705-15,423,279 | + | C2H9g06729 | CX9g055844 | LOC_Os09g31130 | Os09g0484900 | - | Detail |
| C1H9g28280 | 9:15,445,388-15,450,064 | + | C2H9g05554 | CX9g057232 | LOC_Os09g31140 | Os09g0485600 | - | Detail |
| C1H9g16686 | 9:15,458,593-15,459,470 | + | C2H9g12865 | CX9g057421 | LOC_Os09g31170 | Os09g0485800 | - | Detail |
| C1H9g09571 | 9:15,459,801-15,461,525 | - | C2H9g08271 | CX9g056446 | LOC_Os09g31180 | Os09g0485900 | - | Detail |
| C1H9g07652 | 9:15,461,954-15,462,514 | + | C2H9g15653 | - | LOC_Os09g31190 | Os09g0486000 | - | Detail |
| C1H9g10100 | 9:15,467,286-15,467,780 | + | C2H9g10052 | CX9g058060 | LOC_Os09g31200 | Os09g0486500 | SAP1, Osi-SAP1, ISAP1, OsiSAP1, OSISAP1, OsSAP1 | Detail |
| C1H9g04466 | 9:15,478,347-15,479,720 | + | C2H9g09908 | CX9g056228 | LOC_Os09g31210 | Os09g0486700 | OsAGC18 | Detail |
| C1H9g26143 | 9:15,487,243-15,492,467 | - | C2H9g06324 | CX9g057251 | LOC_Os09g31230 | Os09g0487200 | - | Detail |
| C1H9g26058 | 9:15,500,570-15,500,923 | - | C2H8g28041 | CX9g055951 | LOC_Os09g31260 | Os09g0487500 | - | Detail |
| C1H9g29280 | 9:15,501,853-15,504,293 | - | C2H9g10558 | CX9g058148 | LOC_Os09g31270 | Os09g0487600 | - | Detail |
| C1H9g01267 | 9:15,507,404-15,510,950 | + | C2H9g06481 | CX9g055842 | LOC_Os09g31280 | Os09g0487700 | - | Detail |
| C1H9g18482 | 9:15,516,863-15,517,405 | + | C2H9g17245 | CX9g055017 | LOC_Os09g31300 | Os09g0487900 | OsbHLH130 | Detail |
| C1H9g06099 | 9:15,517,524-15,518,950 | + | C2H9g27532 | CX9g055017 | LOC_Os09g31300 | Os09g0487900 | OsbHLH130 | Detail |
| C1H9g24450 | 9:15,527,398-15,527,895 | - | - | CX9g056925 | LOC_Os09g31310 | Os09g0488000 | OsGNA1 | Detail |
| C1H9g04944 | 9:15,542,267-15,544,409 | + | C2H9g14003 | CX9g057197 | LOC_Os09g31350 | Os09g0488600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g20583 | 4:23,517,919-23,518,248 | - | C1H4g29571 | CX4g035537 | LOC_Os04g46060 | Os04g0545000 | OsWRKY36, SGSD3 | Detail |
| C2H4g10919 | 4:23,528,837-23,531,715 | - | C1H4g12807 | CX4g032824 | LOC_Os04g46079 | Os04g0545100 | - | Detail |
| C2H4g28241 | 4:23,532,724-23,538,259 | - | C1H4g02430 | CX4g033135 | LOC_Os04g46100 | Os04g0545200 | - | Detail |
| C2H4g05551 | 4:23,541,342-23,542,244 | - | C1H4g01759 | CX4g031916 | LOC_Os04g46110 | Os04g0545300 | - | Detail |
| C2H4g23072 | 4:23,543,516-23,544,191 | - | C1H4g22242 | CX4g035260 | LOC_Os04g46120 | Os04g0545400 | - | Detail |
| C2H4g24037 | 4:23,546,113-23,547,003 | - | C1H4g03888 | CX4g036612 | LOC_Os04g46130 | Os04g0545600 | - | Detail |
| C2H4g23805 | 4:23,548,773-23,550,069 | - | C1H4g21193 | CX4g035305 | LOC_Os04g46140 | Os04g0545700 | - | Detail |
| C2H4g15752 | 4:23,553,780-23,554,512 | - | C1H4g21864 | CX4g035243 | LOC_Os04g46160 | - | - | Detail |
| C2H4g25751 | 4:23,556,411-23,557,631 | + | - | CX4g032110 | LOC_Os04g46170 | Os04g0546100 | - | Detail |
| C2H4g17081 | 4:23,564,559-23,568,480 | + | C1H4g23759 | CX4g033618 | LOC_Os04g46180 | Os04g0546300 | OsAGC11 | Detail |
| C2H4g11468 | 4:23,569,536-23,572,382 | + | C1H4g03988 | CX4g034379 | LOC_Os04g46190 | Os04g0546400 | - | Detail |
| C2H4g20213 | 4:23,574,157-23,574,606 | - | C1H4g13285 | - | LOC_Os04g46200 | Os04g0546500 | - | Detail |
| C2H4g09322 | 4:23,579,114-23,580,040 | - | C1H4g07196 | CX4g033590 | LOC_Os04g46220 | Os04g0546800 | OsERF1 | Detail |
| C2H4g06793 | 4:23,611,215-23,612,204 | + | C1H4g06177 | CX4g032621 | LOC_Os04g46250 | Os04g0547600 | - | Detail |
| C2H4g07090 | 4:23,620,371-23,620,736 | - | - | CX4g036174 | LOC_Os01g45970 | Os08g0499532 | - | Detail |
| C2H4g18179 | 4:23,624,512-23,627,273 | + | C1H4g12670 | CX4g034183 | LOC_Os04g46280 | Os04g0547900 | - | Detail |
| C2H4g14899 | 4:23,627,851-23,630,916 | + | C1H4g10052 | CX4g033458 | LOC_Os04g46290 | Os04g0548000 | - | Detail |
| C2H4g03445 | 4:23,642,969-23,643,265 | + | - | CX4g031368 | - | - | - | Detail |
| C2H4g08504 | 4:23,643,669-23,646,524 | - | C1H4g30101 | CX4g036152 | LOC_Os04g46300 | Os04g0548100 | - | Detail |
| C2H4g03565 | 4:23,647,926-23,663,171 | + | C1H4g04798 | CX4g035683 | LOC_Os04g46310 | Os04g0548300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |