| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g12162 | 9:15,277,375-15,281,226 | - | C2H9g27046 | CX9g057628 | LOC_Os09g30412 | Os09g0482600 | - | Detail |
| C1H9g30961 | 9:15,287,379-15,290,075 | + | C2H9g23476 | CX9g058160 | LOC_Os09g30414 | Os09g0482200 | - | Detail |
| C1H9g13750 | 9:15,290,307-15,290,974 | - | C2H9g03595 | - | LOC_Os09g30418 | Os09g0482300 | OsLEA6 | Detail |
| C1H9g11589 | 9:15,291,489-15,295,185 | - | C2H9g12791 | CX9g054954 | LOC_Os09g30418 | Os09g0482600 | - | Detail |
| C1H9g24340 | 9:15,296,099-15,296,413 | + | - | CX9g054891 | LOC_Os09g30442 | - | - | Detail |
| C1H9g10634 | 9:15,298,551-15,302,958 | - | C2H9g26838 | CX9g055785 | LOC_Os09g30446 | Os09g0286400 | OsNHX5, GPA6 | Detail |
| C1H9g19752 | 9:15,304,113-15,309,395 | - | C2H9g10380 | CX9g057954 | LOC_Os09g30458 | Os09g0482660 | - | Detail |
| C1H9g05257 | 9:15,310,601-15,311,110 | + | - | CX9g057996 | LOC_Os09g30462 | Os09g0482700 | - | Detail |
| C1H9g15788 | 9:15,311,709-15,314,826 | - | C2H9g04333 | CX9g057490 | LOC_Os09g30466 | Os09g0482680 | OsaTRZ2 | Detail |
| C1H9g12404 | 9:15,315,496-15,321,032 | - | C2H9g30076 | CX9g057638 | LOC_Os09g30474 | Os09g0482720 | - | Detail |
| C1H9g00782 | 9:15,322,810-15,327,159 | + | C2H9g14515 | CX9g055038 | LOC_Os09g30478 | Os09g0482740 | - | Detail |
| C1H9g00122 | 9:15,341,984-15,342,787 | - | C2H9g27195 | CX9g056851 | LOC_Os09g30486 | Os09g0482780 | - | Detail |
| C1H9g03000 | 9:15,348,365-15,348,778 | + | C2H9g17845 | CX9g057607 | LOC_Os09g30490 | Os09g0482800 | OsSUR1 | Detail |
| C1H9g13405 | 9:15,349,070-15,350,530 | - | C2H9g19073 | CX9g055841 | LOC_Os09g30980 | Os09g0482900 | - | Detail |
| C1H9g30699 | 9:15,355,896-15,356,309 | + | C2H9g17845 | CX9g057607 | LOC_Os09g30506 | Os09g0482840 | - | Detail |
| C1H9g23005 | 9:15,356,706-15,360,233 | - | C2H9g18629 | CX9g057859 | LOC_Os09g30510 | Os09g0482860 | - | Detail |
| C1H9g25042 | 9:15,368,042-15,368,458 | + | C2H9g17845 | CX9g057607 | LOC_Os09g31000 | Os09g0483100 | - | Detail |
| C1H9g13668 | 9:15,372,689-15,373,111 | + | C2H9g17845 | CX9g057607 | LOC_Os09g31025 | Os09g0483300 | - | Detail |
| C1H9g13971 | 9:15,376,532-15,376,945 | + | C2H9g17845 | CX9g057607 | LOC_Os09g31040 | Os09g0483500 | - | Detail |
| C1H9g12952 | 9:15,377,954-15,379,033 | - | C2H9g03838 | CX9g057792 | LOC_Os09g31050 | Os09g0483600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g29211 | 5:24,773,434-24,778,298 | - | C1H5g20997 | CX5g038490 | LOC_Os05g51560 | Os05g0593800 | - | Detail |
| C2H5g25800 | 5:24,781,493-24,782,926 | - | C1H5g28104 | CX5g040981 | LOC_Os05g51570 | Os05g0593900 | - | Detail |
| C2H5g28633 | 5:24,788,568-24,789,401 | - | C1H5g28669 | CX5g037849 | LOC_Os05g51590 | Os05g0594100 | - | Detail |
| C2H5g27012 | 5:24,791,474-24,795,427 | - | C1H5g07980 | CX5g040080 | LOC_Os05g51610 | Os05g0594200 | OsCAX1b | Detail |
| C2H5g24138 | 5:24,807,669-24,813,399 | - | C1H5g15566 | CX5g038359 | LOC_Os05g51620 | Os05g0594500 | - | Detail |
| C2H5g08909 | 5:24,821,276-24,829,119 | + | C1H5g26110 | CX5g041049 | LOC_Os05g51630 | Os05g0594700 | - | Detail |
| C2H5g25499 | 5:24,830,313-24,834,947 | - | C1H5g09316 | CX5g039720 | LOC_Os05g51640 | Os05g0594800 | - | Detail |
| C2H5g10034 | 5:24,834,804-24,835,256 | + | - | - | - | - | - | Detail |
| C2H5g15674 | 5:24,835,328-24,836,809 | + | C1H5g23946 | - | LOC_Os05g51650 | Os05g0594900 | - | Detail |
| C2H5g18619 | 5:24,837,143-24,837,715 | - | C1H5g07547 | CX5g039507 | LOC_Os05g51660 | Os05g0595000 | - | Detail |
| C2H5g04566 | 5:24,847,706-24,851,120 | + | C1H5g22966 | CX5g037190 | LOC_Os05g51670 | Os05g0595100 | OsUGE1, OsUGE-1, UGE1, UGE-1, BP1 | Detail |
| C2H5g00689 | 5:24,855,205-24,879,340 | + | C1H5g29705 | CX5g037572 | LOC_Os05g51690 | Os05g0595300 | CRCT, NRR, NRRa | Detail |
| C2H5g03425 | 5:24,855,293-24,856,027 | - | C1H5g17200 | CX5g039657 | LOC_Os05g51680 | Os05g0595200 | - | Detail |
| C2H5g25216 | 5:24,879,621-24,882,457 | - | C1H5g10995 | CX5g038125 | LOC_Os05g51700 | Os05g0595400 | - | Detail |
| C2H5g14814 | 5:24,883,294-24,885,392 | - | C1H5g27674 | CX5g041076 | LOC_Os05g51710 | Os05g0595500 | - | Detail |
| C2H5g08054 | 5:24,889,439-24,889,771 | + | C1H6g06805 | CX5g039789 | - | Os05g0429100 | - | Detail |
| C2H5g23094 | 5:24,890,282-24,894,145 | - | C1H5g24835 | CX5g037161 | LOC_Os05g51740 | Os05g0595800 | - | Detail |
| C2H5g15029 | 5:24,896,984-24,897,528 | - | C1H5g11204 | CX5g037472 | LOC_Os05g45954 | Os05g0121600 | RSR1, OsTOE1, AP2/EREBP#090, AP2/EREBP90 | Detail |
| C2H5g10878 | 5:24,898,710-24,900,326 | + | C1H5g19628 | CX5g037109 | LOC_Os05g51750 | Os05g0596000 | - | Detail |
| C2H5g03677 | 5:24,902,561-24,903,473 | - | C1H5g15344 | CX5g040213 | LOC_Os05g51754 | Os05g0596200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |