| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g31584 | 9:14,397,174-14,398,148 | - | C2H9g05249 | CX9g055140 | LOC_Os09g28750 | Os09g0462200 | - | Detail |
| C1H9g31193 | 9:14,398,159-14,399,079 | - | C2H9g03017 | - | - | Os09g0462301 | - | Detail |
| C1H9g18452 | 9:14,402,609-14,405,130 | + | C2H9g27701 | CX9g057311 | LOC_Os09g28770 | Os09g0462400 | OsMATL2, OspPLAIIeta, OspPLA-IIalpha | Detail |
| C1H9g29610 | 9:14,407,442-14,407,735 | + | C2H9g19629 | CX9g056435 | LOC_Os09g28780 | Os08g0475500 | OsCEP6, OsCEP6.1 | Detail |
| C1H9g28013 | 9:14,417,767-14,421,876 | + | C2H9g05705 | CX9g055048 | LOC_Os09g28810 | Os09g0462700 | - | Detail |
| C1H9g15723 | 9:14,423,139-14,423,470 | + | C2H9g21321 | - | - | Os09g0462850 | - | Detail |
| C1H9g15089 | 9:14,425,555-14,428,291 | - | C2H9g19364 | CX9g057216 | LOC_Os09g28830 | Os09g0462875 | - | Detail |
| C1H9g24460 | 9:14,431,895-14,435,261 | - | C2H9g06754 | CX9g056317 | LOC_Os09g28840 | Os09g0463100 | - | Detail |
| C1H9g16758 | 9:14,443,505-14,446,049 | - | C2H9g26932 | - | - | - | - | Detail |
| C1H9g08405 | 9:14,445,917-14,450,400 | + | C2H9g17616 | CX9g055989 | LOC_Os09g28850 | Os09g0463300 | - | Detail |
| C1H9g27922 | 9:14,462,626-14,463,366 | + | C2H8g04634 | CX8g053678 | LOC_Os09g28880 | Os09g0463600 | - | Detail |
| C1H9g22383 | 9:14,469,635-14,470,756 | + | - | CX8g050532 | LOC_Os09g28890 | Os09g0463700 | - | Detail |
| C1H9g29908 | 9:14,477,978-14,478,205 | + | C2H9g06208 | CX9g058102 | LOC_Os09g28900 | Os09g0463900 | - | Detail |
| C1H9g13495 | 9:14,479,436-14,479,918 | + | C2H9g06208 | CX9g055813 | LOC_Os09g28900 | Os09g0410700 | - | Detail |
| C1H9g11908 | 9:14,481,560-14,486,123 | - | C2H9g27359 | CX9g057340 | LOC_Os09g28910 | Os09g0464000 | - | Detail |
| C1H9g03015 | 9:14,485,149-14,486,023 | + | - | - | - | Os09g0464066 | - | Detail |
| C1H9g26305 | 9:14,498,312-14,499,307 | - | C2H9g21979 | CX9g056952 | LOC_Os09g28930 | Os09g0464300 | - | Detail |
| C1H9g02656 | 9:14,510,601-14,518,761 | - | C2H9g10275 | CX9g056356 | LOC_Os09g28940 | Os09g0464400 | - | Detail |
| C1H9g11367 | 9:14,531,631-14,532,587 | - | C2H9g26296 | CX9g057742 | LOC_Os09g29050 | Os09g0465400 | - | Detail |
| C1H9g04483 | 9:14,534,358-14,537,056 | + | C2H9g25155 | CX9g057144 | LOC_Os09g29060 | Os09g0465500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g27007 | 4:27,628,714-27,632,351 | - | C1H4g15756 | CX4g033542 | LOC_Os04g53510 | Os04g0626600 | - | Detail |
| C2H4g13550 | 4:27,633,987-27,638,322 | - | C1H4g30303 | CX4g033542 | LOC_Os04g53520 | Os04g0626700 | - | Detail |
| C2H4g30483 | 4:27,640,360-27,645,156 | + | C1H4g26337 | CX4g035627 | LOC_Os04g53530 | Os04g0626900 | - | Detail |
| C2H4g26106 | 4:27,645,102-27,652,282 | - | C1H4g28934 | CX4g034251 | LOC_Os04g53540 | Os04g0569100 | ROC4, Roc4 | Detail |
| C2H4g07233 | 4:27,658,446-27,666,718 | - | C1H4g03362 | - | LOC_Os04g53550 | Os04g0627132 | - | Detail |
| C2H4g10303 | 4:27,666,971-27,667,645 | - | C1H4g14911 | CX4g034529 | LOC_Os04g53550 | Os04g0627200 | - | Detail |
| C2H4g14741 | 4:27,672,117-27,672,884 | + | C1H4g23088 | CX4g032258 | LOC_Os04g53560 | Os04g0627300 | - | Detail |
| C2H4g22454 | 4:27,677,077-27,678,671 | - | C1H4g30660 | CX4g034354 | LOC_Os04g53580 | Os04g0627400 | - | Detail |
| C2H4g19362 | 4:27,685,044-27,687,489 | - | C1H4g12581 | CX4g033798 | LOC_Os04g53612 | Os04g0628000 | - | Detail |
| C2H4g25755 | 4:27,691,329-27,698,059 | + | C1H4g20793 | CX4g033819 | LOC_Os04g53630 | Os04g0628200 | - | Detail |
| C2H4g09027 | 4:27,699,678-27,700,346 | + | C1H4g25538 | CX4g031787 | LOC_Os04g53650 | Os04g0628300 | - | Detail |
| C2H4g12158 | 4:27,703,123-27,708,963 | - | C1H4g00150 | CX4g035421 | LOC_Os04g53660 | Os04g0628400 | - | Detail |
| C2H4g14925 | 4:27,710,063-27,720,466 | - | C1H4g16750 | CX4g031603 | LOC_Os04g53670 | Os04g0628600 | - | Detail |
| C2H4g23818 | 4:27,724,116-27,725,906 | + | C1H4g04700 | CX4g034974 | LOC_Os04g53680 | Os04g0628900 | - | Detail |
| C2H4g29403 | 4:27,727,647-27,730,332 | + | C1H4g12167 | CX4g036640 | LOC_Os04g53690 | Os04g0629000 | - | Detail |
| C2H4g22771 | 4:27,730,786-27,735,397 | - | C1H4g18446 | CX4g034413 | LOC_Os04g53700 | Os04g0629100 | - | Detail |
| C2H4g09379 | 4:27,736,595-27,737,494 | + | C1H4g24587 | CX4g036336 | LOC_Os04g53710 | Os04g0629200 | - | Detail |
| C2H4g19513 | 4:27,738,264-27,743,735 | - | C1H4g06832 | CX4g032888 | LOC_Os04g53720 | Os04g0629300 | OsCHR715, CHR715 | Detail |
| C2H4g02318 | 4:27,746,594-27,746,962 | - | C1H4g16584 | CX4g035073 | LOC_Os04g53730 | Os04g0629400 | - | Detail |
| C2H4g17413 | 4:27,748,524-27,749,706 | - | C1H4g16584 | CX4g034863 | LOC_Os04g53740 | Os04g0629500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |