| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28705 | 9:14,082,386-14,085,112 | - | C2H9g16247 | CX9g055538 | LOC_Os09g28180 | Os09g0454900 | SDRLK-65 | Detail |
| C1H9g16360 | 9:14,099,302-14,100,577 | - | C2H9g04822 | CX9g056281 | LOC_Os09g28200 | Os09g0455200 | - | Detail |
| C1H9g13470 | 9:14,117,924-14,118,634 | + | C2H9g27532 | CX9g056428 | LOC_Os09g28210 | Os09g0455300 | OsbHLH120, qRT9 | Detail |
| C1H9g14260 | 9:14,127,883-14,129,418 | + | - | CX9g054921 | LOC_Os09g28220 | Os09g0455400 | - | Detail |
| C1H9g26526 | 9:14,132,653-14,133,615 | - | C2H9g21518 | CX9g055449 | LOC_Os09g28230 | Os09g0455500 | - | Detail |
| C1H9g30982 | 9:14,135,762-14,136,721 | - | C2H9g21518 | CX9g055140 | LOC_Os09g28280 | Os09g0455900 | - | Detail |
| C1H9g04635 | 9:14,144,033-14,149,540 | + | C2H9g30062 | CX9g057536 | LOC_Os09g28300 | Os09g0456100 | - | Detail |
| C1H9g15793 | 9:14,151,855-14,155,854 | + | C2H9g07506 | CX9g057089 | LOC_Os09g28310 | Os09g0456200 | bZIP72, OsbZIP72 | Detail |
| C1H9g14428 | 9:14,163,321-14,164,511 | - | C2H8g02869 | CX9g057237 | LOC_Os09g28340 | Os09g0456700 | - | Detail |
| C1H9g07328 | 9:14,175,436-14,180,412 | + | C2H9g21988 | CX9g057315 | LOC_Os09g28354 | Os09g0456800 | OsHsf23 | Detail |
| C1H9g05942 | 9:14,189,906-14,193,435 | - | C2H9g18507 | CX9g057565 | LOC_Os09g28390 | Os09g0457100 | OsABA8ox3 | Detail |
| C1H9g07321 | 9:14,215,317-14,217,269 | + | C2H9g27523 | CX9g056155 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| C1H9g27020 | 9:14,224,376-14,226,672 | + | C2H9g05118 | CX9g057558 | LOC_Os09g28420 | Os09g0457600 | - | Detail |
| C1H9g14254 | 9:14,232,038-14,234,114 | + | C2H9g05118 | CX9g055637 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| C1H9g19292 | 9:14,236,876-14,238,403 | + | C2H9g27891 | CX9g056052 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| C1H9g18282 | 9:14,239,677-14,240,501 | + | C2H9g20787 | CX9g056987 | LOC_Os09g28440 | Os09g0457900 | ERF102, OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB | Detail |
| C1H9g17506 | 9:14,243,495-14,245,972 | + | C2H9g22499 | CX9g056678 | LOC_Os09g28450 | Os09g0458000 | - | Detail |
| C1H9g21504 | 9:14,249,901-14,251,636 | - | C2H9g09485 | CX9g055800 | LOC_Os09g28460 | Os09g0458100 | - | Detail |
| C1H9g04223 | 9:14,253,097-14,255,854 | + | C2H9g28847 | CX9g056670 | LOC_Os09g28470 | Os09g0458300 | - | Detail |
| C1H9g14790 | 9:14,256,571-14,259,265 | + | C2H9g28847 | CX9g056670 | LOC_Os09g28480 | Os09g0458400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g08415 | 4:7,614,721-7,616,787 | - | C1H4g03083 | CX4g031444 | LOC_Os04g14810 | Os04g0225100 | - | Detail |
| C2H4g25571 | 4:7,700,970-7,702,953 | + | C1H4g22740 | CX4g032785 | LOC_Os04g14990 | Os04g0225700 | - | Detail |
| C2H4g26908 | 4:7,715,193-7,717,410 | + | C1H4g21527 | CX4g032287 | - | Os04g0533200 | Os2R_MYB48 | Detail |
| C2H4g01760 | 4:7,808,051-7,808,790 | - | - | - | - | - | - | Detail |
| C2H4g02986 | 4:7,824,796-7,827,554 | + | C1H4g29899 | CX4g035071 | LOC_Os04g15560 | Os04g0226340 | - | Detail |
| C2H4g20653 | 4:7,829,044-7,829,820 | + | C1H4g19253 | - | - | - | - | Detail |
| C2H4g11387 | 4:7,829,832-7,830,020 | + | - | - | LOC_Os11g29300 | - | - | Detail |
| C2H4g01413 | 4:7,833,984-7,834,494 | + | C1H4g29899 | CX4g032952 | LOC_Os04g15660 | Os04g0227200 | - | Detail |
| C2H4g17844 | 4:7,835,826-7,839,062 | + | C1H4g23086 | CX4g032952 | LOC_Os04g15650 | Os04g0226666 | - | Detail |
| C2H4g24973 | 4:7,875,040-7,875,285 | + | - | CX4g031366 | LOC_Os04g15600 | - | - | Detail |
| C2H4g23707 | 4:7,904,903-7,906,568 | + | C1H4g17421 | CX4g035840 | LOC_Os04g15580 | Os04g0631800 | SDK6 | Detail |
| C2H4g25122 | 4:7,935,301-7,939,310 | + | C1H4g13475 | CX4g031366 | LOC_Os04g15630 | Os04g0226800 | - | Detail |
| C2H4g17108 | 4:7,954,592-7,954,780 | - | C1H4g00401 | CX4g036483 | - | - | - | Detail |
| C2H4g21260 | 4:7,956,794-7,959,979 | + | C1H4g23086 | CX4g031429 | LOC_Os04g15650 | Os04g0227000 | - | Detail |
| C2H4g19700 | 4:7,983,149-7,983,876 | + | C1H4g23086 | CX4g032952 | LOC_Os04g15660 | Os04g0227200 | - | Detail |
| C2H4g20815 | 4:7,989,802-7,990,710 | + | C1H4g05741 | CX4g034260 | LOC_Os04g15670 | - | - | Detail |
| C2H4g23720 | 4:8,007,860-8,012,318 | + | C1H4g21393 | CX4g031813 | LOC_Os04g15690 | Os04g0227500 | - | Detail |
| C2H4g03785 | 4:8,023,790-8,025,932 | + | - | - | - | - | - | Detail |
| C2H4g28272 | 4:8,032,192-8,033,330 | + | - | - | - | - | - | Detail |
| C2H4g14611 | 4:8,055,199-8,061,854 | + | C1H4g20234 | CX4g031792 | LOC_Os04g15790 | Os04g0228000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |