| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28705 | 9:14,082,386-14,085,112 | - | C2H9g16247 | CX9g055538 | LOC_Os09g28180 | Os09g0454900 | SDRLK-65 | Detail |
| C1H9g16360 | 9:14,099,302-14,100,577 | - | C2H9g04822 | CX9g056281 | LOC_Os09g28200 | Os09g0455200 | - | Detail |
| C1H9g13470 | 9:14,117,924-14,118,634 | + | C2H9g27532 | CX9g056428 | LOC_Os09g28210 | Os09g0455300 | OsbHLH120, qRT9 | Detail |
| C1H9g14260 | 9:14,127,883-14,129,418 | + | - | CX9g054921 | LOC_Os09g28220 | Os09g0455400 | - | Detail |
| C1H9g26526 | 9:14,132,653-14,133,615 | - | C2H9g21518 | CX9g055449 | LOC_Os09g28230 | Os09g0455500 | - | Detail |
| C1H9g30982 | 9:14,135,762-14,136,721 | - | C2H9g21518 | CX9g055140 | LOC_Os09g28280 | Os09g0455900 | - | Detail |
| C1H9g04635 | 9:14,144,033-14,149,540 | + | C2H9g30062 | CX9g057536 | LOC_Os09g28300 | Os09g0456100 | - | Detail |
| C1H9g15793 | 9:14,151,855-14,155,854 | + | C2H9g07506 | CX9g057089 | LOC_Os09g28310 | Os09g0456200 | bZIP72, OsbZIP72 | Detail |
| C1H9g14428 | 9:14,163,321-14,164,511 | - | C2H8g02869 | CX9g057237 | LOC_Os09g28340 | Os09g0456700 | - | Detail |
| C1H9g07328 | 9:14,175,436-14,180,412 | + | C2H9g21988 | CX9g057315 | LOC_Os09g28354 | Os09g0456800 | OsHsf23 | Detail |
| C1H9g05942 | 9:14,189,906-14,193,435 | - | C2H9g18507 | CX9g057565 | LOC_Os09g28390 | Os09g0457100 | OsABA8ox3 | Detail |
| C1H9g07321 | 9:14,215,317-14,217,269 | + | C2H9g27523 | CX9g056155 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| C1H9g27020 | 9:14,224,376-14,226,672 | + | C2H9g05118 | CX9g057558 | LOC_Os09g28420 | Os09g0457600 | - | Detail |
| C1H9g14254 | 9:14,232,038-14,234,114 | + | C2H9g05118 | CX9g055637 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| C1H9g19292 | 9:14,236,876-14,238,403 | + | C2H9g27891 | CX9g056052 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| C1H9g18282 | 9:14,239,677-14,240,501 | + | C2H9g20787 | CX9g056987 | LOC_Os09g28440 | Os09g0457900 | ERF102, OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB | Detail |
| C1H9g17506 | 9:14,243,495-14,245,972 | + | C2H9g22499 | CX9g056678 | LOC_Os09g28450 | Os09g0458000 | - | Detail |
| C1H9g21504 | 9:14,249,901-14,251,636 | - | C2H9g09485 | CX9g055800 | LOC_Os09g28460 | Os09g0458100 | - | Detail |
| C1H9g04223 | 9:14,253,097-14,255,854 | + | C2H9g28847 | CX9g056670 | LOC_Os09g28470 | Os09g0458300 | - | Detail |
| C1H9g14790 | 9:14,256,571-14,259,265 | + | C2H9g28847 | CX9g056670 | LOC_Os09g28480 | Os09g0458400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g21290 | 3:27,144,259-27,147,001 | + | C1H3g02226 | CX3g025544 | LOC_Os03g51640 | Os03g0726400 | - | Detail |
| C2H3g14903 | 3:27,147,603-27,153,167 | - | C1H3g17376 | CX3g026178 | LOC_Os03g51650 | Os03g0726500 | - | Detail |
| C2H3g08813 | 3:27,169,931-27,170,535 | - | C1H3g20845 | CX3g028096 | LOC_Os03g51660 | Os03g0726700 | TAC3 | Detail |
| C2H3g26898 | 3:27,172,020-27,176,770 | - | C1H3g06495 | CX3g027385 | LOC_Os03g51670 | Os03g0726800 | - | Detail |
| C2H3g29132 | 3:27,179,651-27,182,095 | - | C1H3g20532 | - | LOC_Os03g51680 | Os03g0726900 | - | Detail |
| C2H3g04769 | 3:27,183,568-27,192,996 | - | C1H3g31203 | CX3g029433 | LOC_Os03g51690 | Os03g0673000 | - | Detail |
| C2H3g17627 | 3:27,208,745-27,210,481 | + | C1H3g28999 | CX3g029277 | LOC_Os03g51700 | Os03g0727100 | - | Detail |
| C2H3g26829 | 3:27,211,090-27,213,589 | - | C1H3g18589 | CX3g027566 | LOC_Os03g51710 | Os03g0673000 | - | Detail |
| C2H3g16078 | 3:27,216,284-27,217,020 | - | C1H3g28804 | CX3g027566 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C2H3g10133 | 3:27,217,234-27,217,521 | - | C1H3g29743 | CX3g029433 | LOC_Os03g51710 | Os03g0727200 | OSH3 | Detail |
| C2H3g07488 | 3:27,240,550-27,242,793 | - | C1H3g10075 | CX3g027050 | LOC_Os03g51740 | Os03g0727600 | ACS1, ACC1*, OsACS1, Os-ACS1, ACC1 | Detail |
| C2H3g29705 | 3:27,270,239-27,277,690 | - | C1H3g08935 | CX3g031106 | LOC_Os03g51790 | Os03g0727900 | - | Detail |
| C2H3g15707 | 3:27,282,280-27,284,906 | + | C1H3g03486 | CX3g025416 | LOC_Os03g51830 | Os03g0728100 | - | Detail |
| C2H3g03478 | 3:27,295,426-27,297,246 | - | C1H3g05198 | CX3g027150 | LOC_Os03g51880 | Os03g0728600 | - | Detail |
| C2H3g14472 | 3:27,300,463-27,301,294 | - | C1H3g06505 | - | LOC_Os03g51890 | - | - | Detail |
| C2H3g03813 | 3:27,303,954-27,309,655 | - | C1H3g18395 | CX3g026995 | LOC_Os03g51890 | - | - | Detail |
| C2H3g12518 | 3:27,313,031-27,321,193 | + | C1H3g00993 | CX3g028728 | LOC_Os03g51900 | Os03g0728800 | - | Detail |
| C2H3g09824 | 3:27,322,187-27,326,035 | - | C1H3g31891 | CX3g029342 | LOC_Os03g51910 | Os03g0728900 | - | Detail |
| C2H3g06497 | 3:27,331,385-27,333,432 | - | C1H3g25139 | CX3g026713 | LOC_Os03g51920 | Os03g0729000 | - | Detail |
| C2H3g02798 | 3:27,336,292-27,337,983 | - | C1H3g11342 | CX3g029290 | LOC_Os03g51930 | Os03g0729100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |