| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28705 | 9:14,082,386-14,085,112 | - | C2H9g16247 | CX9g055538 | LOC_Os09g28180 | Os09g0454900 | SDRLK-65 | Detail |
| C1H9g16360 | 9:14,099,302-14,100,577 | - | C2H9g04822 | CX9g056281 | LOC_Os09g28200 | Os09g0455200 | - | Detail |
| C1H9g13470 | 9:14,117,924-14,118,634 | + | C2H9g27532 | CX9g056428 | LOC_Os09g28210 | Os09g0455300 | OsbHLH120, qRT9 | Detail |
| C1H9g14260 | 9:14,127,883-14,129,418 | + | - | CX9g054921 | LOC_Os09g28220 | Os09g0455400 | - | Detail |
| C1H9g26526 | 9:14,132,653-14,133,615 | - | C2H9g21518 | CX9g055449 | LOC_Os09g28230 | Os09g0455500 | - | Detail |
| C1H9g30982 | 9:14,135,762-14,136,721 | - | C2H9g21518 | CX9g055140 | LOC_Os09g28280 | Os09g0455900 | - | Detail |
| C1H9g04635 | 9:14,144,033-14,149,540 | + | C2H9g30062 | CX9g057536 | LOC_Os09g28300 | Os09g0456100 | - | Detail |
| C1H9g15793 | 9:14,151,855-14,155,854 | + | C2H9g07506 | CX9g057089 | LOC_Os09g28310 | Os09g0456200 | bZIP72, OsbZIP72 | Detail |
| C1H9g14428 | 9:14,163,321-14,164,511 | - | C2H8g02869 | CX9g057237 | LOC_Os09g28340 | Os09g0456700 | - | Detail |
| C1H9g07328 | 9:14,175,436-14,180,412 | + | C2H9g21988 | CX9g057315 | LOC_Os09g28354 | Os09g0456800 | OsHsf23 | Detail |
| C1H9g05942 | 9:14,189,906-14,193,435 | - | C2H9g18507 | CX9g057565 | LOC_Os09g28390 | Os09g0457100 | OsABA8ox3 | Detail |
| C1H9g07321 | 9:14,215,317-14,217,269 | + | C2H9g27523 | CX9g056155 | LOC_Os09g28400 | Os09g0457400 | Amy3A | Detail |
| C1H9g27020 | 9:14,224,376-14,226,672 | + | C2H9g05118 | CX9g057558 | LOC_Os09g28420 | Os09g0457600 | - | Detail |
| C1H9g14254 | 9:14,232,038-14,234,114 | + | C2H9g05118 | CX9g055637 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| C1H9g19292 | 9:14,236,876-14,238,403 | + | C2H9g27891 | CX9g056052 | LOC_Os09g28420 | Os09g0457800 | Amy3C | Detail |
| C1H9g18282 | 9:14,239,677-14,240,501 | + | C2H9g20787 | CX9g056987 | LOC_Os09g28440 | Os09g0457900 | ERF102, OsERF#102, OsERF102, AP2/EREBP#123, AP2/EREBP123, OsEATB, EATB | Detail |
| C1H9g17506 | 9:14,243,495-14,245,972 | + | C2H9g22499 | CX9g056678 | LOC_Os09g28450 | Os09g0458000 | - | Detail |
| C1H9g21504 | 9:14,249,901-14,251,636 | - | C2H9g09485 | CX9g055800 | LOC_Os09g28460 | Os09g0458100 | - | Detail |
| C1H9g04223 | 9:14,253,097-14,255,854 | + | C2H9g28847 | CX9g056670 | LOC_Os09g28470 | Os09g0458300 | - | Detail |
| C1H9g14790 | 9:14,256,571-14,259,265 | + | C2H9g28847 | CX9g056670 | LOC_Os09g28480 | Os09g0458400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g17420 | 12:576,328-576,815 | - | C1H11g07924 | CX11g011992 | - | - | - | Detail |
| C2H12g21007 | 12:577,403-582,931 | + | C1H12g10573 | CX12g017281 | LOC_Os12g02130 | Os12g0112600 | - | Detail |
| C2H12g15227 | 12:587,768-589,454 | + | C1H12g21697 | CX12g016942 | LOC_Os12g02150 | Os12g0112800 | - | Detail |
| C2H12g26510 | 12:614,749-615,195 | - | C1H11g09702 | CX12g016971 | LOC_Os12g02210 | Os12g0113700 | - | Detail |
| C2H12g25203 | 12:616,927-618,834 | + | C1H12g19599 | CX12g016492 | LOC_Os12g02230 | Os12g0113900 | - | Detail |
| C2H12g01364 | 12:622,997-627,989 | - | C1H12g09257 | CX12g018666 | LOC_Os12g02250 | Os12g0114100 | - | Detail |
| C2H12g16786 | 12:631,503-632,558 | + | C1H12g12697 | CX12g017586 | - | Os07g0631500 | - | Detail |
| C2H12g25278 | 12:633,669-641,140 | - | C1H12g19945 | CX12g018689 | LOC_Os12g02260 | Os12g0114200 | - | Detail |
| C2H12g02687 | 12:661,889-662,788 | + | C1H12g28409 | - | LOC_Os12g02310 | Os12g0115000 | LTPC1 | Detail |
| C2H12g29120 | 12:686,886-688,007 | - | C1H12g16682 | CX12g015227 | LOC_Os12g02370 | Os12g0115700 | OsCHIL2 | Detail |
| C2H12g30415 | 12:689,434-691,909 | + | C1H12g13992 | CX12g018356 | LOC_Os12g02380 | Os12g0115900 | - | Detail |
| C2H12g22137 | 12:692,281-700,295 | - | C1H12g11893 | CX12g017180 | LOC_Os11g02460 | Os12g0116000 | - | Detail |
| C2H12g20641 | 12:701,612-702,907 | - | C1H12g28204 | CX12g015666 | LOC_Os12g02400 | Os12g0116100 | OsWRKY114 | Detail |
| C2H12g12304 | 12:724,976-726,010 | - | C1H12g11890 | CX12g018039 | LOC_Os12g02440 | Os12g0116600 | - | Detail |
| C2H12g07276 | 12:730,152-731,391 | - | C1H11g22300 | CX12g015666 | LOC_Os12g02450 | Os12g0116700 | OsWRKY64 | Detail |
| C2H12g00570 | 12:737,668-739,200 | - | C1H12g31265 | CX12g015666 | LOC_Os12g02470 | Os12g0116800 | OsWRKY65 | Detail |
| C2H12g24474 | 12:747,212-751,283 | - | C1H12g18259 | CX12g015559 | LOC_Os12g02490 | Os11g0117700 | - | Detail |
| C2H12g05739 | 12:755,673-756,760 | + | C1H12g22137 | CX12g015723 | LOC_Os12g02500 | Os12g0117100 | - | Detail |
| C2H12g05075 | 12:757,387-759,134 | + | C1H12g11262 | CX12g015723 | LOC_Os12g02510 | Os12g0117200 | - | Detail |
| C2H12g16005 | 12:760,160-761,669 | - | C1H12g13059 | CX12g017747 | LOC_Os11g02600 | Os12g0117300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |