| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01747 | 1:30,415,265-30,418,741 | - | C2H1g23296 | CX1g005787 | LOC_Os01g59160 | Os01g0806000 | - | Detail |
| C1H1g27652 | 1:30,421,382-30,425,556 | - | C2H1g17900 | CX1g001223 | LOC_Os01g59180 | Os01g0806200 | - | Detail |
| C1H1g03002 | 1:30,439,882-30,440,739 | + | C2H1g24895 | CX1g005984 | LOC_Os01g59200 | Os01g0806400 | - | Detail |
| C1H1g04816 | 1:30,446,521-30,448,685 | + | C2H1g26128 | - | - | - | - | Detail |
| C1H1g05644 | 1:30,477,528-30,478,032 | - | C2H1g23457 | CX1g003314 | LOC_Os01g59320 | - | - | Detail |
| C1H1g20078 | 1:30,478,891-30,479,746 | - | C2H1g23457 | - | - | - | - | Detail |
| C1H1g24133 | 1:30,479,416-30,490,128 | + | C2H1g05117 | CX1g004494 | LOC_Os01g59340 | Os01g0807900 | - | Detail |
| C1H1g17602 | 1:30,491,837-30,497,972 | - | C2H1g04858 | CX1g003387 | LOC_Os01g59350 | Os01g0808100 | OsTGA2 | Detail |
| C1H1g29312 | 1:30,507,899-30,510,166 | + | C2H1g17898 | CX1g004253 | LOC_Os01g59360 | Os01g0808400 | OsCPK2 | Detail |
| C1H1g11629 | 1:30,522,384-30,522,938 | + | C2H5g22106 | CX5g038007 | LOC_Os01g59410 | Os01g0808900 | OsVQ4, qTGW1.2b | Detail |
| C1H1g29168 | 1:30,548,603-30,552,636 | + | C2H1g23554 | CX1g000100 | LOC_Os01g59440 | Os01g0809300 | LRR1, OsLRR1 | Detail |
| C1H1g14629 | 1:30,556,953-30,558,812 | + | C2H1g09879 | CX1g001964 | LOC_Os01g59470 | - | - | Detail |
| C1H1g27334 | 1:30,560,018-30,560,762 | + | C2H1g15165 | CX1g003076 | LOC_Os01g59480 | Os01g0812600 | - | Detail |
| C1H1g04269 | 1:30,562,179-30,563,643 | + | C2H1g15165 | CX1g003076 | LOC_Os01g59480 | Os01g0812600 | - | Detail |
| C1H1g08327 | 1:30,567,914-30,573,223 | + | C2H1g27115 | CX1g004356 | LOC_Os01g59490 | Os01g0809900 | - | Detail |
| C1H1g01557 | 1:30,571,551-30,573,981 | - | C2H1g13365 | CX1g002424 | LOC_Os01g59500 | Os01g0810000 | - | Detail |
| C1H1g20345 | 1:30,574,450-30,578,489 | - | C2H1g08587 | CX1g006451 | LOC_Os01g59510 | Os01g0810100 | - | Detail |
| C1H1g31825 | 1:30,578,781-30,584,908 | + | C2H1g08159 | CX1g000157 | LOC_Os01g59520 | Os01g0810200 | - | Detail |
| C1H1g13792 | 1:30,586,172-30,593,741 | - | C2H1g22778 | CX1g001838 | LOC_Os01g59550 | Os01g0810500 | - | Detail |
| C1H1g02266 | 1:30,595,430-30,602,032 | - | C2H1g19577 | CX1g001838 | LOC_Os01g59560 | Os01g0810600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g11450 | 7:7,124,958-7,125,581 | - | C1H7g21224 | CX7g048720 | LOC_Os07g14660 | Os07g0250501 | - | Detail |
| C2H7g23778 | 7:7,137,781-7,138,464 | - | C1H7g21292 | CX7g048720 | LOC_Os07g14700 | Os07g0250900 | - | Detail |
| C2H7g28203 | 7:7,149,078-7,149,719 | - | C1H7g21224 | CX7g048720 | LOC_Os07g14740 | Os07g0250501 | - | Detail |
| C2H7g28553 | 7:7,186,019-7,186,360 | - | - | CX7g048902 | LOC_Os07g14750 | Os07g0251301 | - | Detail |
| C2H7g15996 | 7:7,200,306-7,203,510 | + | C1H7g18810 | CX7g048268 | LOC_Os07g14820 | Os07g0251900 | - | Detail |
| C2H7g05679 | 7:7,207,094-7,212,290 | + | C1H7g10746 | CX7g046435 | LOC_Os07g14830 | Os07g0252000 | - | Detail |
| C2H7g17134 | 7:7,223,715-7,229,463 | + | C1H7g26817 | CX7g049667 | LOC_Os07g14850 | Os07g0252400 | - | Detail |
| C2H7g23750 | 7:7,246,226-7,246,788 | + | C1H7g10089 | CX7g048231 | LOC_Os07g14890 | Os07g0252800 | - | Detail |
| C2H7g19402 | 7:7,250,072-7,252,482 | + | C1H7g26508 | CX7g050168 | LOC_Os07g14910 | Os07g0253000 | - | Detail |
| C2H7g05963 | 7:7,264,734-7,267,208 | + | C1H7g01742 | CX7g049155 | LOC_Os07g15100 | Os11g0105750 | - | Detail |
| C2H7g08804 | 7:7,268,652-7,270,616 | + | C1H7g17603 | - | - | - | - | Detail |
| C2H7g14446 | 7:7,371,109-7,372,779 | - | C1H7g31283 | CX7g047859 | LOC_Os07g15230 | Os07g0255900 | - | Detail |
| C2H7g28428 | 7:7,384,135-7,386,590 | + | C1H7g31340 | CX7g047486 | LOC_Os07g15270 | Os07g0256200 | - | Detail |
| C2H7g03084 | 7:7,387,642-7,390,675 | - | C1H7g04567 | CX7g046073 | LOC_Os07g15280 | Os07g0256300 | - | Detail |
| C2H7g00027 | 7:7,393,258-7,394,158 | + | C1H7g10057 | - | - | - | - | Detail |
| C2H7g14105 | 7:7,397,943-7,399,796 | + | C1H7g05073 | CX7g049409 | LOC_Os07g15320 | Os07g0256700 | - | Detail |
| C2H7g16317 | 7:7,428,225-7,435,578 | - | C1H7g15620 | CX7g047655 | LOC_Os07g15370 | Os07g0257200 | NRAMP5, OsNRAMP5, OsNramp5 | Detail |
| C2H7g08787 | 7:7,441,684-7,444,000 | - | - | - | - | - | - | Detail |
| C2H7g21797 | 7:7,460,714-7,465,665 | + | C1H7g04435 | CX7g050324 | LOC_Os07g15460 | Os07g0258400 | NRAMP1, OsNramp1, OsNRAMP1 | Detail |
| C2H7g24866 | 7:7,471,502-7,474,421 | + | C1H7g23800 | CX7g047521 | LOC_Os07g15490 | Os07g0258700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |