| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g29246 | 9:13,139,175-13,140,140 | - | C2H9g11992 | CX9g057370 | LOC_Os09g26320 | Os09g0433300 | - | Detail |
| C1H9g31213 | 9:13,144,129-13,145,079 | - | C2H9g11992 | CX9g055514 | LOC_Os09g26330 | Os09g0432900 | - | Detail |
| C1H9g01667 | 9:13,145,970-13,146,281 | + | C2H3g05811 | CX5g040997 | LOC_Os09g26340 | Os09g0433600 | OsPH9 | Detail |
| C1H9g27915 | 9:13,149,800-13,151,722 | - | C2H9g05570 | CX9g055489 | LOC_Os09g26360 | Os09g0433700 | - | Detail |
| C1H9g02658 | 9:13,154,732-13,155,370 | + | C2H9g09410 | CX9g057181 | LOC_Os09g26370 | Os09g0433800 | OsFLZ27 | Detail |
| C1H9g04439 | 9:13,157,877-13,163,865 | + | C2H9g06864 | CX9g057591 | LOC_Os09g26380 | Os09g0433900 | - | Detail |
| C1H9g15309 | 9:13,164,715-13,171,494 | - | C2H9g19064 | CX9g056804 | LOC_Os09g26390 | Os09g0434000 | - | Detail |
| C1H9g24876 | 9:13,172,452-13,175,751 | - | C2H9g26030 | CX9g057034 | LOC_Os09g26400 | Os09g0434200 | - | Detail |
| C1H9g26152 | 9:13,185,374-13,188,516 | + | C2H9g20787 | CX9g057238 | LOC_Os09g26420 | Os09g0434500 | - | Detail |
| C1H9g14182 | 9:13,202,112-13,202,912 | - | C2H9g24847 | CX9g057503 | LOC_Os09g26460 | Os09g0434900 | - | Detail |
| C1H9g15524 | 9:13,204,203-13,209,605 | - | C2H9g03422 | CX9g055347 | LOC_Os09g26470 | Os09g0435250 | - | Detail |
| C1H9g05369 | 9:13,214,686-13,216,054 | + | C2H9g09724 | CX9g057698 | LOC_Os09g26480 | - | - | Detail |
| C1H9g19041 | 9:13,225,417-13,226,739 | + | C2H9g14632 | CX9g054961 | LOC_Os09g26500 | Os09g0435700 | - | Detail |
| C1H9g08312 | 9:13,228,182-13,231,125 | - | C2H9g30633 | CX9g057172 | LOC_Os09g26560 | Os09g0436700 | - | Detail |
| C1H9g26425 | 9:13,233,869-13,244,703 | + | C2H9g21233 | CX9g056280 | LOC_Os09g26570 | Os09g0436800 | - | Detail |
| C1H9g23177 | 9:13,245,999-13,249,331 | + | C2H9g00492 | CX9g057291 | LOC_Os09g26580 | Os09g0436900 | - | Detail |
| C1H9g26511 | 9:13,269,357-13,269,854 | + | C2H8g00654 | CX9g056532 | LOC_Os09g26590 | Os09g0437100 | - | Detail |
| C1H9g31256 | 9:13,281,562-13,282,140 | - | C2H9g23012 | CX9g057820 | LOC_Os09g26610 | Os09g0437400 | - | Detail |
| C1H9g21686 | 9:13,290,587-13,292,466 | + | C2H9g23573 | CX9g057952 | LOC_Os09g26620 | Os09g0437500 | - | Detail |
| C1H9g24554 | 9:13,300,007-13,304,336 | + | C2H9g14978 | CX9g055490 | LOC_Os09g26650 | Os09g0437900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g25319 | 5:19,156,751-19,158,788 | + | C1H5g20773 | CX5g038806 | LOC_Os05g38800 | Os05g0463400 | - | Detail |
| C2H5g01133 | 5:19,161,477-19,166,795 | + | C1H5g12108 | CX5g039882 | LOC_Os05g38810 | Os05g0463500 | - | Detail |
| C2H5g16713 | 5:19,168,094-19,171,222 | - | C1H5g15206 | CX5g040078 | LOC_Os05g38820 | Os05g0463800 | HAP3B, OsHAP3B, OsNF-YB-3, NFYB3 | Detail |
| C2H5g05069 | 5:19,173,660-19,179,975 | - | C1H5g26692 | CX5g038352 | LOC_Os05g38830 | Os05g0463900 | - | Detail |
| C2H5g10683 | 5:19,184,512-19,192,346 | + | C1H5g04043 | CX5g038856 | LOC_Os05g38850 | Os05g0464100 | - | Detail |
| C2H5g06217 | 5:19,194,622-19,194,965 | - | C1H5g03107 | - | - | - | - | Detail |
| C2H5g23544 | 5:19,195,352-19,195,600 | - | C1H5g03378 | - | LOC_Os05g38860 | Os05g0464200 | - | Detail |
| C2H5g00642 | 5:19,199,886-19,206,233 | - | C1H5g03501 | CX5g040041 | LOC_Os05g38930 | Os05g0464300 | - | Detail |
| C2H5g07866 | 5:19,217,478-19,217,720 | + | C1H5g26266 | CX5g037441 | LOC_Os05g38940 | Os05g0465000 | - | Detail |
| C2H5g20572 | 5:19,223,965-19,231,672 | - | C1H5g29457 | CX5g037912 | LOC_Os05g38950 | Os05g0465100 | - | Detail |
| C2H5g24578 | 5:19,235,155-19,235,750 | - | C1H5g08488 | CX5g039928 | LOC_Os05g38960 | Os05g0465400 | - | Detail |
| C2H5g17637 | 5:19,235,757-19,235,936 | - | C1H5g08488 | CX5g039928 | LOC_Os05g38960 | Os05g0465400 | - | Detail |
| C2H5g18626 | 5:19,241,364-19,245,819 | + | C1H5g21670 | CX5g037984 | LOC_Os05g38980 | Os05g0465800 | - | Detail |
| C2H5g30441 | 5:19,252,568-19,253,730 | - | C1H5g02280 | CX5g037393 | LOC_Os05g38990 | Os05g0466100 | - | Detail |
| C2H5g26967 | 5:19,257,046-19,259,772 | - | C1H5g22492 | CX5g037000 | LOC_Os05g39000 | Os05g0466200 | - | Detail |
| C2H5g09767 | 5:19,262,798-19,263,109 | + | C1H5g21036 | CX5g040997 | LOC_Os05g38740 | Os05g0462700 | - | Detail |
| C2H5g13581 | 5:19,264,419-19,265,837 | - | C1H5g31118 | CX5g039804 | LOC_Os05g39060 | Os05g0126800 | - | Detail |
| C2H5g06731 | 5:19,269,933-19,272,096 | + | C1H5g05117 | CX5g039967 | LOC_Os05g39070 | Os05g0466800 | - | Detail |
| C2H5g29590 | 5:19,272,713-19,277,747 | - | C1H5g14576 | CX5g037557 | LOC_Os05g39080 | Os05g0466900 | - | Detail |
| C2H5g06761 | 5:19,280,042-19,285,362 | - | C1H5g19503 | CX5g037206 | LOC_Os05g39090 | Os05g0467000 | OsCPK16 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |