| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g29246 | 9:13,139,175-13,140,140 | - | C2H9g11992 | CX9g057370 | LOC_Os09g26320 | Os09g0433300 | - | Detail |
| C1H9g31213 | 9:13,144,129-13,145,079 | - | C2H9g11992 | CX9g055514 | LOC_Os09g26330 | Os09g0432900 | - | Detail |
| C1H9g01667 | 9:13,145,970-13,146,281 | + | C2H3g05811 | CX5g040997 | LOC_Os09g26340 | Os09g0433600 | OsPH9 | Detail |
| C1H9g27915 | 9:13,149,800-13,151,722 | - | C2H9g05570 | CX9g055489 | LOC_Os09g26360 | Os09g0433700 | - | Detail |
| C1H9g02658 | 9:13,154,732-13,155,370 | + | C2H9g09410 | CX9g057181 | LOC_Os09g26370 | Os09g0433800 | OsFLZ27 | Detail |
| C1H9g04439 | 9:13,157,877-13,163,865 | + | C2H9g06864 | CX9g057591 | LOC_Os09g26380 | Os09g0433900 | - | Detail |
| C1H9g15309 | 9:13,164,715-13,171,494 | - | C2H9g19064 | CX9g056804 | LOC_Os09g26390 | Os09g0434000 | - | Detail |
| C1H9g24876 | 9:13,172,452-13,175,751 | - | C2H9g26030 | CX9g057034 | LOC_Os09g26400 | Os09g0434200 | - | Detail |
| C1H9g26152 | 9:13,185,374-13,188,516 | + | C2H9g20787 | CX9g057238 | LOC_Os09g26420 | Os09g0434500 | - | Detail |
| C1H9g14182 | 9:13,202,112-13,202,912 | - | C2H9g24847 | CX9g057503 | LOC_Os09g26460 | Os09g0434900 | - | Detail |
| C1H9g15524 | 9:13,204,203-13,209,605 | - | C2H9g03422 | CX9g055347 | LOC_Os09g26470 | Os09g0435250 | - | Detail |
| C1H9g05369 | 9:13,214,686-13,216,054 | + | C2H9g09724 | CX9g057698 | LOC_Os09g26480 | - | - | Detail |
| C1H9g19041 | 9:13,225,417-13,226,739 | + | C2H9g14632 | CX9g054961 | LOC_Os09g26500 | Os09g0435700 | - | Detail |
| C1H9g08312 | 9:13,228,182-13,231,125 | - | C2H9g30633 | CX9g057172 | LOC_Os09g26560 | Os09g0436700 | - | Detail |
| C1H9g26425 | 9:13,233,869-13,244,703 | + | C2H9g21233 | CX9g056280 | LOC_Os09g26570 | Os09g0436800 | - | Detail |
| C1H9g23177 | 9:13,245,999-13,249,331 | + | C2H9g00492 | CX9g057291 | LOC_Os09g26580 | Os09g0436900 | - | Detail |
| C1H9g26511 | 9:13,269,357-13,269,854 | + | C2H8g00654 | CX9g056532 | LOC_Os09g26590 | Os09g0437100 | - | Detail |
| C1H9g31256 | 9:13,281,562-13,282,140 | - | C2H9g23012 | CX9g057820 | LOC_Os09g26610 | Os09g0437400 | - | Detail |
| C1H9g21686 | 9:13,290,587-13,292,466 | + | C2H9g23573 | CX9g057952 | LOC_Os09g26620 | Os09g0437500 | - | Detail |
| C1H9g24554 | 9:13,300,007-13,304,336 | + | C2H9g14978 | CX9g055490 | LOC_Os09g26650 | Os09g0437900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23186 | 1:27,269,220-27,271,527 | + | C1H1g25026 | CX1g000184 | LOC_Os01g53240 | Os01g0733500 | - | Detail |
| C2H1g16933 | 1:27,272,531-27,277,968 | - | C1H1g17481 | CX1g001304 | LOC_Os01g53250 | Os01g0733600 | - | Detail |
| C2H1g28398 | 1:27,285,980-27,289,362 | + | C1H1g18098 | CX1g001858 | LOC_Os01g53260 | Os01g0734000 | OsWRKY23 | Detail |
| C2H1g03923 | 1:27,293,250-27,293,800 | + | C1H1g05786 | CX1g006620 | LOC_Os01g53280 | Os01g0734100 | - | Detail |
| C2H1g19534 | 1:27,304,010-27,311,886 | + | C1H1g09802 | CX1g004251 | LOC_Os01g53294 | Os01g0734200 | OsRbohA, OsNOX2 | Detail |
| C2H1g09241 | 1:27,326,536-27,327,972 | + | C1H1g16727 | CX1g003337 | LOC_Os01g53350 | Os01g0734800 | - | Detail |
| C2H1g27577 | 1:27,338,608-27,340,083 | + | C1H1g17596 | CX1g000021 | LOC_Os01g53370 | Os01g0735300 | - | Detail |
| C2H1g28000 | 1:27,363,984-27,365,414 | - | C1H1g12410 | CX1g004334 | LOC_Os01g53420 | Os01g0735900 | - | Detail |
| C2H1g20968 | 1:27,364,009-27,365,288 | + | - | - | - | Os01g0735450 | - | Detail |
| C2H1g21886 | 1:27,365,328-27,367,380 | + | - | - | - | - | - | Detail |
| C2H1g03039 | 1:27,370,524-27,371,948 | - | C1H1g11199 | CX1g005230 | LOC_Os01g53430 | Os01g0736100 | - | Detail |
| C2H1g19693 | 1:27,379,721-27,381,136 | - | C1H1g10989 | CX1g005230 | LOC_Os01g53460 | Os01g0736300 | OsUGT706D1 | Detail |
| C2H1g23129 | 1:27,381,416-27,384,963 | + | C1H1g04228 | CX1g005942 | LOC_Os01g53450 | Os01g0736400 | - | Detail |
| C2H1g09664 | 1:27,386,344-27,387,096 | + | C1H1g11257 | CX1g003434 | LOC_Os01g53470 | Os01g0736500 | - | Detail |
| C2H1g22559 | 1:27,401,377-27,403,368 | + | C1H1g18188 | CX1g003962 | LOC_Os01g53520 | Os01g0736900 | - | Detail |
| C2H1g29848 | 1:27,411,208-27,418,789 | + | C1H1g17501 | CX1g006682 | LOC_Os01g53560 | Os01g0737300 | - | Detail |
| C2H1g21171 | 1:27,420,379-27,421,816 | + | C1H1g26053 | CX1g007234 | LOC_Os01g53570 | Os01g0737500 | - | Detail |
| C2H1g23141 | 1:27,421,843-27,422,460 | + | C1H1g26053 | CX1g007234 | - | Os01g0221600 | OsALMT4 | Detail |
| C2H1g28481 | 1:27,428,371-27,429,000 | + | C1H1g28789 | CX1g001301 | LOC_Os01g53590 | Os01g0737700 | - | Detail |
| C2H1g06822 | 1:27,430,737-27,435,013 | - | C1H1g20246 | CX1g004371 | LOC_Os01g53600 | Os01g0737800 | OsERA1, OsERA1.1, OsPFT-β | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |