| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g13057 | 9:12,584,138-12,585,307 | - | C2H9g20999 | CX9g057047 | LOC_Os09g25430 | Os09g0421700 | DRG9 | Detail |
| C1H9g23603 | 9:12,587,943-12,590,276 | - | C2H9g15585 | CX9g057707 | LOC_Os09g25440 | Os09g0421800 | - | Detail |
| C1H9g04652 | 9:12,593,636-12,598,556 | - | C2H9g18547 | CX9g057935 | LOC_Os09g25460 | Os09g0422000 | - | Detail |
| C1H9g01940 | 9:12,615,438-12,619,954 | + | C2H9g29866 | CX9g055442 | LOC_Os09g25490 | Os09g0422500 | BC6, Bc6*, Bc6, OsCesA9, CESA9, OsCESA9, OS_CESA09, OsCesA 9, CesA9 | Detail |
| C1H9g20433 | 9:12,620,407-12,626,122 | - | C2H9g13149 | CX9g056791 | LOC_Os09g25500 | Os09g0422600 | - | Detail |
| C1H9g21248 | 9:12,635,681-12,639,402 | + | C2H9g06178 | CX9g057973 | LOC_Os09g25540 | Os09g0423200 | - | Detail |
| C1H9g20875 | 9:12,649,113-12,652,671 | + | C2H9g01199 | CX9g056726 | LOC_Os09g25550 | Os09g0423300 | - | Detail |
| C1H9g17046 | 9:12,653,522-12,654,362 | + | C2H9g29489 | - | LOC_Os09g25560 | Os09g0423400 | - | Detail |
| C1H9g17486 | 9:12,661,767-12,665,414 | + | C2H9g29489 | CX9g056113 | LOC_Os09g25560 | Os09g0423400 | - | Detail |
| C1H9g03392 | 9:12,670,046-12,672,492 | + | C2H9g01038 | CX9g057440 | LOC_Os09g25570 | Os09g0423500 | - | Detail |
| C1H9g16029 | 9:12,674,210-12,680,470 | - | C2H9g24507 | CX9g057486 | LOC_Os09g25580 | Os09g0423600 | - | Detail |
| C1H9g26575 | 9:12,683,243-12,685,087 | + | C2H9g10831 | CX9g055033 | LOC_Os09g25590 | Os09g0423700 | - | Detail |
| C1H9g05792 | 9:12,689,878-12,692,291 | + | C2H9g19598 | CX9g056085 | - | Os09g0423800 | - | Detail |
| C1H9g02235 | 9:12,693,511-12,694,089 | + | C2H9g25061 | CX9g056085 | - | Os09g0423800 | - | Detail |
| C1H9g00425 | 9:12,707,019-12,709,306 | + | C2H9g10731 | CX9g057342 | LOC_Os09g25610 | Os09g0424200 | - | Detail |
| C1H9g11995 | 9:12,710,832-12,714,328 | - | C2H9g23538 | CX9g056823 | LOC_Os09g25625 | Os09g0424300 | - | Detail |
| C1H9g23061 | 9:12,721,715-12,722,705 | + | C2H9g21679 | CX9g057732 | - | - | - | Detail |
| C1H9g16841 | 9:12,724,903-12,725,151 | + | C2H9g08773 | - | - | Os09g0424501 | - | Detail |
| C1H9g06900 | 9:12,725,160-12,730,885 | + | C2H9g17706 | CX9g055223 | LOC_Os09g25640 | Os09g0424600 | - | Detail |
| C1H9g23183 | 9:12,731,686-12,739,342 | - | C2H9g22032 | CX9g054887 | LOC_Os09g25650 | Os09g0424701 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g03662 | 2:15,466,298-15,477,537 | + | C1H2g03922 | CX2g022863 | LOC_Os02g27000 | Os02g0469300 | - | Detail |
| C2H2g19137 | 2:15,485,325-15,489,014 | + | C1H2g14140 | CX2g021164 | LOC_Os02g27030 | Os02g0469600 | OsACP1 | Detail |
| C2H2g21339 | 2:15,502,866-15,505,034 | + | C1H2g09800 | CX2g022256 | LOC_Os02g27060 | Os02g0469900 | - | Detail |
| C2H2g06526 | 2:15,506,193-15,506,994 | + | C1H2g09800 | CX2g022256 | LOC_Os02g27060 | Os02g0469900 | - | Detail |
| C2H2g23766 | 2:15,529,774-15,541,632 | - | C1H2g01442 | CX2g020404 | LOC_Os02g27110 | Os02g0470400 | - | Detail |
| C2H2g18897 | 2:15,553,271-15,556,415 | - | - | CX2g020404 | LOC_Os02g27130 | - | - | Detail |
| C2H2g27319 | 2:15,558,560-15,573,059 | - | C1H2g17839 | CX2g020404 | LOC_Os02g27130 | Os02g0470600 | - | Detail |
| C2H2g07152 | 2:15,590,658-15,593,435 | + | C1H2g07522 | CX2g020865 | LOC_Os02g27200 | Os02g0471300 | - | Detail |
| C2H2g29356 | 2:15,596,718-15,601,140 | - | C1H2g05586 | CX2g021066 | LOC_Os02g27220 | Os02g0471500 | - | Detail |
| C2H2g07089 | 2:15,667,110-15,667,794 | + | C1H2g13395 | CX2g020901 | LOC_Os02g27300 | Os02g0472500 | - | Detail |
| C2H2g29417 | 2:15,674,494-15,678,518 | + | C1H2g20001 | CX2g020901 | LOC_Os02g27310 | Os02g0472566 | - | Detail |
| C2H2g11544 | 2:15,678,912-15,679,847 | + | C1H2g20001 | CX2g019519 | LOC_Os02g27310 | Os02g0472700 | MAK3 | Detail |
| C2H2g00979 | 2:15,691,066-15,697,354 | - | C1H2g15677 | CX2g020971 | - | Os02g0473000 | - | Detail |
| C2H2g19592 | 2:15,698,657-15,703,500 | - | C1H2g14078 | CX2g020109 | LOC_Os02g27360 | Os02g0473200 | - | Detail |
| C2H2g26308 | 2:15,708,843-15,709,430 | + | - | CX2g023748 | - | - | - | Detail |
| C2H2g15757 | 2:15,728,057-15,744,264 | + | C1H2g22573 | CX2g020578 | LOC_Os02g27440 | Os02g0474300 | - | Detail |
| C2H2g01789 | 2:15,766,549-15,785,240 | + | C1H2g16641 | CX2g022898 | LOC_Os02g27470 | Os02g0474700 | - | Detail |
| C2H2g25541 | 2:15,821,295-15,822,365 | - | C1H2g31225 | CX2g024345 | - | Os02g0741800 | - | Detail |
| C2H2g06095 | 2:15,838,372-15,840,164 | - | C1H2g09822 | - | - | - | - | Detail |
| C2H2g21853 | 2:15,846,174-15,850,460 | + | C1H2g23802 | CX2g024681 | LOC_Os02g27480 | Os02g0475300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |