| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g13057 | 9:12,584,138-12,585,307 | - | C2H9g20999 | CX9g057047 | LOC_Os09g25430 | Os09g0421700 | DRG9 | Detail |
| C1H9g23603 | 9:12,587,943-12,590,276 | - | C2H9g15585 | CX9g057707 | LOC_Os09g25440 | Os09g0421800 | - | Detail |
| C1H9g04652 | 9:12,593,636-12,598,556 | - | C2H9g18547 | CX9g057935 | LOC_Os09g25460 | Os09g0422000 | - | Detail |
| C1H9g01940 | 9:12,615,438-12,619,954 | + | C2H9g29866 | CX9g055442 | LOC_Os09g25490 | Os09g0422500 | BC6, Bc6*, Bc6, OsCesA9, CESA9, OsCESA9, OS_CESA09, OsCesA 9, CesA9 | Detail |
| C1H9g20433 | 9:12,620,407-12,626,122 | - | C2H9g13149 | CX9g056791 | LOC_Os09g25500 | Os09g0422600 | - | Detail |
| C1H9g21248 | 9:12,635,681-12,639,402 | + | C2H9g06178 | CX9g057973 | LOC_Os09g25540 | Os09g0423200 | - | Detail |
| C1H9g20875 | 9:12,649,113-12,652,671 | + | C2H9g01199 | CX9g056726 | LOC_Os09g25550 | Os09g0423300 | - | Detail |
| C1H9g17046 | 9:12,653,522-12,654,362 | + | C2H9g29489 | - | LOC_Os09g25560 | Os09g0423400 | - | Detail |
| C1H9g17486 | 9:12,661,767-12,665,414 | + | C2H9g29489 | CX9g056113 | LOC_Os09g25560 | Os09g0423400 | - | Detail |
| C1H9g03392 | 9:12,670,046-12,672,492 | + | C2H9g01038 | CX9g057440 | LOC_Os09g25570 | Os09g0423500 | - | Detail |
| C1H9g16029 | 9:12,674,210-12,680,470 | - | C2H9g24507 | CX9g057486 | LOC_Os09g25580 | Os09g0423600 | - | Detail |
| C1H9g26575 | 9:12,683,243-12,685,087 | + | C2H9g10831 | CX9g055033 | LOC_Os09g25590 | Os09g0423700 | - | Detail |
| C1H9g05792 | 9:12,689,878-12,692,291 | + | C2H9g19598 | CX9g056085 | - | Os09g0423800 | - | Detail |
| C1H9g02235 | 9:12,693,511-12,694,089 | + | C2H9g25061 | CX9g056085 | - | Os09g0423800 | - | Detail |
| C1H9g00425 | 9:12,707,019-12,709,306 | + | C2H9g10731 | CX9g057342 | LOC_Os09g25610 | Os09g0424200 | - | Detail |
| C1H9g11995 | 9:12,710,832-12,714,328 | - | C2H9g23538 | CX9g056823 | LOC_Os09g25625 | Os09g0424300 | - | Detail |
| C1H9g23061 | 9:12,721,715-12,722,705 | + | C2H9g21679 | CX9g057732 | - | - | - | Detail |
| C1H9g16841 | 9:12,724,903-12,725,151 | + | C2H9g08773 | - | - | Os09g0424501 | - | Detail |
| C1H9g06900 | 9:12,725,160-12,730,885 | + | C2H9g17706 | CX9g055223 | LOC_Os09g25640 | Os09g0424600 | - | Detail |
| C1H9g23183 | 9:12,731,686-12,739,342 | - | C2H9g22032 | CX9g054887 | LOC_Os09g25650 | Os09g0424701 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g25740 | 1:26,694,748-26,699,145 | + | C1H1g23869 | CX1g004561 | LOC_Os01g52070 | Os01g0718700 | - | Detail |
| C2H1g24505 | 1:26,714,715-26,715,616 | + | C1H1g28082 | CX1g002233 | LOC_Os01g52100 | Os01g0719000 | - | Detail |
| C2H1g11421 | 1:26,717,894-26,723,523 | - | C1H1g06605 | CX1g000580 | LOC_Os01g52110 | Os01g0719100 | OsRZFP34, OsRFP1 | Detail |
| C2H1g16157 | 1:26,740,175-26,745,520 | + | C1H1g27416 | CX1g004024 | LOC_Os01g52130 | Os01g0719300 | OsSULTR3;6 | Detail |
| C2H1g04500 | 1:26,748,623-26,755,241 | + | C1H1g30372 | CX1g005204 | LOC_Os01g52140 | Os01g0719400 | - | Detail |
| C2H1g02109 | 1:26,759,341-26,761,366 | + | C1H1g18944 | CX1g003039 | LOC_Os01g52160 | Os01g0719600 | - | Detail |
| C2H1g21306 | 1:26,763,950-26,767,711 | + | C1H1g29948 | CX1g005692 | LOC_Os01g52170 | Os01g0719700 | - | Detail |
| C2H1g12535 | 1:26,769,527-26,770,882 | + | C1H1g29733 | CX1g006540 | LOC_Os01g52180 | Os01g0719900 | - | Detail |
| C2H1g22549 | 1:26,771,642-26,772,982 | - | C1H1g20732 | CX1g004595 | LOC_Os01g52190 | Os01g0720000 | - | Detail |
| C2H1g00582 | 1:26,775,109-26,775,414 | - | C1H1g20732 | CX1g000903 | LOC_Os01g52200 | Os01g0600000 | - | Detail |
| C2H1g08396 | 1:26,776,572-26,777,635 | - | C1H1g14278 | CX1g005572 | LOC_Os01g52214 | Os01g0720300 | - | Detail |
| C2H1g00446 | 1:26,778,657-26,779,109 | - | C1H1g29269 | CX1g005572 | LOC_Os01g52214 | Os01g0720300 | - | Detail |
| C2H1g27768 | 1:26,787,614-26,797,572 | - | C1H1g31092 | CX1g006085 | LOC_Os01g52250 | Os01g0720600 | SSIVA, OsSSIVa, SSIV-1 | Detail |
| C2H1g16044 | 1:26,803,711-26,807,926 | + | C1H1g09046 | CX1g006432 | LOC_Os01g52270 | Os01g0720800 | - | Detail |
| C2H1g14542 | 1:26,815,643-26,829,755 | + | C1H1g19609 | CX1g000877 | LOC_Os01g52380 | Os01g0721500 | - | Detail |
| C2H1g05952 | 1:26,831,267-26,832,757 | + | C1H1g19609 | CX1g000877 | LOC_Os01g52330 | Os01g0721500 | - | Detail |
| C2H1g03938 | 1:26,839,832-26,842,760 | - | C1H1g16429 | CX1g001695 | LOC_Os01g52390 | Os01g0721900 | - | Detail |
| C2H1g29212 | 1:26,847,227-26,850,713 | + | C1H1g19540 | CX1g005554 | LOC_Os01g52400 | Os01g0722100 | - | Detail |
| C2H1g15644 | 1:26,859,096-26,860,429 | + | C1H1g14417 | CX1g004391 | LOC_Os01g52410 | Os01g0722300 | Os2R_MYB14 | Detail |
| C2H1g14945 | 1:26,867,882-26,871,754 | + | C1H1g17552 | CX1g002677 | LOC_Os01g52450 | Os01g0722700 | OsHXK9 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |