| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28255 | 9:12,431,143-12,432,360 | + | C2H9g03616 | CX9g058068 | LOC_Os09g25100 | Os09g0418500 | - | Detail |
| C1H9g11840 | 9:12,432,740-12,433,980 | + | - | CX9g055309 | LOC_Os09g35760 | - | - | Detail |
| C1H9g03474 | 9:12,439,076-12,439,339 | - | - | - | - | - | - | Detail |
| C1H9g16620 | 9:12,449,144-12,449,992 | - | - | - | - | - | - | Detail |
| C1H9g10222 | 9:12,469,988-12,472,937 | - | C2H9g11990 | CX9g057653 | LOC_Os09g25150 | Os09g0419200 | - | Detail |
| C1H9g03561 | 9:12,484,501-12,485,356 | - | C2H9g18402 | CX9g055071 | - | - | - | Detail |
| C1H9g27951 | 9:12,485,681-12,487,468 | + | C2H9g00271 | CX9g056568 | LOC_Os09g25190 | Os09g0419500 | - | Detail |
| C1H9g23658 | 9:12,491,482-12,492,528 | + | C2H9g23762 | CX9g056568 | LOC_Os09g25200 | Os09g0419600 | - | Detail |
| C1H9g24531 | 9:12,494,352-12,495,792 | + | C2H9g25913 | CX9g055694 | LOC_Os09g25220 | Os09g0420000 | - | Detail |
| C1H9g05253 | 9:12,498,655-12,501,980 | + | C2H9g01801 | CX9g055694 | LOC_Os09g25260 | Os09g0420100 | - | Detail |
| C1H9g23693 | 9:12,502,359-12,502,715 | + | - | - | LOC_Os09g25270 | Os09g0420200 | - | Detail |
| C1H9g21007 | 9:12,509,867-12,513,617 | - | C2H9g28714 | CX9g055351 | LOC_Os09g25290 | Os09g0420300 | - | Detail |
| C1H9g28851 | 9:12,518,217-12,521,192 | - | C2H9g04494 | CX9g056780 | LOC_Os09g25310 | Os09g0420600 | - | Detail |
| C1H9g13617 | 9:12,521,110-12,522,957 | + | C2H9g25576 | CX9g056019 | LOC_Os09g25314 | Os09g0420700 | - | Detail |
| C1H9g09470 | 9:12,527,412-12,532,944 | - | C2H9g18572 | CX9g058181 | LOC_Os09g25330 | Os09g0420900 | - | Detail |
| C1H9g26024 | 9:12,549,259-12,553,126 | - | C2H9g09588 | CX9g055908 | LOC_Os09g25370 | Os09g0421100 | - | Detail |
| C1H9g02641 | 9:12,554,070-12,567,962 | - | C2H9g10962 | CX9g057078 | LOC_Os09g25380 | Os09g0421200 | - | Detail |
| C1H9g29866 | 9:12,568,817-12,573,021 | - | C2H9g17055 | CX9g056194 | LOC_Os09g25390 | Os09g0421300 | - | Detail |
| C1H9g17171 | 9:12,577,204-12,578,438 | + | C2H9g14095 | CX9g054998 | LOC_Os09g25410 | Os09g0421500 | - | Detail |
| C1H9g16363 | 9:12,578,796-12,581,496 | - | C2H9g26024 | CX9g055874 | LOC_Os09g25420 | Os09g0421600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g15323 | 7:2,997,345-2,999,550 | - | C1H7g31839 | CX7g050004 | LOC_Os07g06660 | Os07g0160400 | - | Detail |
| C2H7g04792 | 7:3,005,158-3,006,950 | + | C1H7g10977 | CX7g049818 | LOC_Os07g06670 | Os07g0160500 | - | Detail |
| C2H7g20200 | 7:3,010,160-3,013,488 | + | C1H7g30967 | CX7g046783 | LOC_Os07g06680 | Os07g0160600 | - | Detail |
| C2H7g10241 | 7:3,025,783-3,031,415 | - | C1H7g30885 | CX7g047372 | LOC_Os07g06710 | Os07g0161000 | - | Detail |
| C2H7g20288 | 7:3,034,009-3,036,013 | + | C1H7g26727 | CX7g046953 | LOC_Os07g06730 | Os07g0161500 | - | Detail |
| C2H7g04340 | 7:3,037,088-3,041,876 | - | C1H7g06448 | CX7g049860 | LOC_Os07g06740 | Os07g0161600 | CDPK17, OsCPK17 | Detail |
| C2H7g01138 | 7:3,044,727-3,045,254 | + | - | CX7g048179 | LOC_Os07g06750 | Os07g0161700 | - | Detail |
| C2H7g11082 | 7:3,059,356-3,061,108 | - | C1H7g15459 | CX7g048571 | LOC_Os07g06800 | Os07g0162100 | - | Detail |
| C2H7g29889 | 7:3,063,347-3,064,201 | - | - | CX7g049835 | LOC_Os07g06810 | Os07g0162200 | - | Detail |
| C2H7g01313 | 7:3,065,305-3,070,302 | + | C1H7g24248 | CX7g049055 | LOC_Os07g06820 | Os07g0162300 | - | Detail |
| C2H7g28686 | 7:3,074,945-3,075,937 | - | C1H7g03092 | CX7g048930 | LOC_Os07g06830 | Os07g0162400 | - | Detail |
| C2H7g04371 | 7:3,081,209-3,082,192 | - | C1H7g12903 | CX7g048930 | LOC_Os07g06840 | Os07g0162500 | - | Detail |
| C2H7g19297 | 7:3,084,191-3,085,195 | - | C1H7g03092 | CX7g048930 | LOC_Os07g06850 | Os07g0162600 | - | Detail |
| C2H7g23395 | 7:3,092,483-3,093,529 | - | C1H7g03092 | CX7g047650 | LOC_Os07g06860 | Os07g0162700 | - | Detail |
| C2H7g13583 | 7:3,109,890-3,110,882 | - | C1H7g03092 | CX7g048930 | LOC_Os07g06880 | Os07g0162900 | - | Detail |
| C2H7g15677 | 7:3,112,928-3,119,804 | - | C1H7g06281 | CX7g049022 | LOC_Os07g06890 | Os07g0163000 | OsD-LDH, D-LDH, OsD-LDH-Tr | Detail |
| C2H7g11414 | 7:3,122,576-3,124,884 | - | C1H7g03136 | CX7g046953 | LOC_Os07g06900 | Os07g0163200 | - | Detail |
| C2H7g28250 | 7:3,127,611-3,128,989 | - | C1H7g06104 | CX7g050145 | LOC_Os07g06910 | - | - | Detail |
| C2H7g28897 | 7:3,141,972-3,154,158 | + | C1H7g10635 | CX7g047813 | LOC_Os07g06940 | Os07g0163500 | WP1, OsValRS2, ValRS2 | Detail |
| C2H7g16342 | 7:3,162,056-3,173,815 | + | C1H7g30562 | CX7g047695 | LOC_Os07g06950 | Os07g0163800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |