| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g08810 | 9:12,030,394-12,030,648 | + | C2H9g10864 | CX1g005092 | LOC_Os01g02050 | Os01g0110700 | - | Detail |
| C1H9g20900 | 9:12,035,423-12,037,823 | - | C2H9g24788 | CX9g058102 | LOC_Os09g24490 | Os09g0410700 | - | Detail |
| C1H9g20141 | 9:12,047,191-12,048,447 | + | C2H9g22733 | CX9g055159 | - | - | - | Detail |
| C1H9g14098 | 9:12,054,850-12,056,899 | + | C2H9g29686 | CX9g057499 | - | Os09g0411500 | - | Detail |
| C1H9g27648 | 9:12,057,578-12,059,221 | - | C2H9g08999 | CX9g055250 | LOC_Os09g24520 | Os09g0411600 | - | Detail |
| C1H9g15710 | 9:12,060,097-12,062,297 | - | C2H9g24020 | CX9g055887 | LOC_Os09g24530 | Os09g0411650 | - | Detail |
| C1H9g26658 | 9:12,063,561-12,065,573 | - | C2H9g15723 | - | LOC_Os09g24540 | Os09g0411700 | - | Detail |
| C1H9g25817 | 9:12,070,509-12,071,525 | - | C2H9g30013 | CX9g056422 | LOC_Os09g24560 | Os09g0411900 | - | Detail |
| C1H9g11852 | 9:12,080,227-12,080,736 | - | C2H9g19569 | CX9g056828 | LOC_Os09g36830 | Os09g0412050 | - | Detail |
| C1H9g04539 | 9:12,081,452-12,084,659 | - | C2H9g29693 | CX9g055609 | LOC_Os09g24570 | Os09g0412200 | - | Detail |
| C1H9g10655 | 9:12,086,877-12,087,398 | - | C2H9g21780 | CX9g054907 | LOC_Os09g24580 | Os09g0412300 | - | Detail |
| C1H9g24887 | 9:12,097,302-12,097,676 | - | C2H9g24987 | CX9g056335 | LOC_Os09g24590 | Os09g0412400 | - | Detail |
| C1H9g25612 | 9:12,107,462-12,108,871 | + | C2H9g22954 | CX9g056498 | LOC_Os09g24620 | Os09g0412700 | - | Detail |
| C1H9g29027 | 9:12,111,255-12,112,766 | + | C2H9g08999 | CX9g057109 | LOC_Os09g24640 | Os09g0412900 | - | Detail |
| C1H9g10917 | 9:12,116,662-12,121,711 | + | C2H9g30609 | CX9g055582 | LOC_Os09g24650 | Os09g0413000 | - | Detail |
| C1H9g25606 | 9:12,122,597-12,125,827 | - | C2H9g23813 | CX9g054861 | LOC_Os09g24660 | Os09g0413100 | - | Detail |
| C1H9g01483 | 9:12,125,928-12,129,855 | + | C2H9g23311 | CX9g055611 | LOC_Os09g24670 | Os09g0413200 | - | Detail |
| C1H9g27670 | 9:12,132,894-12,135,332 | - | C2H9g07064 | CX9g055527 | LOC_Os09g24680 | Os09g0413300 | OsPPR1 | Detail |
| C1H9g13850 | 9:12,136,686-12,138,300 | - | C2H9g21107 | CX9g055730 | LOC_Os09g24690 | Os09g0413500 | - | Detail |
| C1H9g31189 | 9:12,139,771-12,144,382 | - | C2H9g10108 | CX9g055962 | LOC_Os09g24700 | Os09g0413600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g29177 | 2:27,727,327-27,728,047 | - | C1H2g10199 | CX2g023592 | LOC_Os02g49410 | Os02g0725900 | HAP3K, OsHAP3K/OsNF-YB1, OsHAP3K, OsNF-YB1, nf-yb1, OsLEC1, OsNF-YB-1, NFYB1, OsEnS-41 | Detail |
| C2H2g08490 | 2:27,734,464-27,735,258 | - | - | CX2g022300 | LOC_Os02g49420 | Os02g0726000 | - | Detail |
| C2H2g29636 | 2:27,742,313-27,743,152 | - | C1H2g09874 | CX2g023852 | LOC_Os02g49440 | Os02g0726300 | - | Detail |
| C2H2g05677 | 2:27,754,641-27,758,029 | + | C1H2g05214 | CX2g019656 | LOC_Os02g49450 | Os02g0726400 | - | Detail |
| C2H2g30015 | 2:27,761,753-27,765,830 | + | C1H2g12431 | CX2g023556 | LOC_Os02g49460 | Os02g0726500 | - | Detail |
| C2H2g00814 | 2:27,768,081-27,768,764 | + | - | CX2g024926 | LOC_Os02g49470 | Os02g0726600 | - | Detail |
| C2H2g09813 | 2:27,769,254-27,771,661 | - | C1H2g21836 | CX2g023944 | LOC_Os02g49480 | Os02g0726700 | OsbHLH034 | Detail |
| C2H2g17575 | 2:27,776,478-27,778,991 | - | C1H2g12455 | CX2g022260 | LOC_Os02g49510 | Os02g0727100 | - | Detail |
| C2H2g05996 | 2:27,780,509-27,785,880 | + | C1H2g29396 | CX2g024123 | LOC_Os02g49520 | Os02g0727300 | - | Detail |
| C2H2g05669 | 2:27,788,543-27,790,875 | - | C1H2g07912 | CX2g019961 | LOC_Os02g49530 | Os02g0727500 | - | Detail |
| C2H2g19256 | 2:27,794,670-27,795,602 | + | C1H2g26668 | CX2g023170 | LOC_Os02g49550 | Os02g0727700 | - | Detail |
| C2H2g25351 | 2:27,807,255-27,807,764 | + | C1H2g05141 | CX2g019013 | LOC_Os02g49560 | Os02g0728001 | bZIP43 | Detail |
| C2H2g28910 | 2:27,809,196-27,817,139 | - | C1H2g01405 | CX2g021134 | LOC_Os02g49570 | Os02g0728100 | - | Detail |
| C2H2g03568 | 2:27,818,993-27,819,614 | + | C1H2g31094 | CX2g022512 | LOC_Os02g49590 | Os02g0728300 | - | Detail |
| C2H2g16287 | 2:27,820,522-27,825,782 | + | C1H2g31094 | CX2g022649 | LOC_Os02g49590 | Os02g0728300 | - | Detail |
| C2H2g29677 | 2:27,820,568-27,821,645 | - | - | CX3g030699 | - | - | - | Detail |
| C2H2g04353 | 2:27,827,242-27,830,998 | - | C1H2g01710 | CX2g020763 | LOC_Os02g49600 | Os02g0728500 | - | Detail |
| C2H2g01821 | 2:27,834,839-27,836,806 | - | C1H2g15124 | CX2g020190 | LOC_Os02g49610 | Os02g0728600 | - | Detail |
| C2H2g11437 | 2:27,837,325-27,840,366 | + | C1H2g22353 | CX2g023333 | LOC_Os02g49620 | Os02g0728700 | - | Detail |
| C2H2g09268 | 2:27,841,086-27,847,518 | + | C1H2g30542 | CX2g023611 | LOC_Os02g49640 | Os02g0728800 | OsTET3 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |