| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g08810 | 9:12,030,394-12,030,648 | + | C2H9g10864 | CX1g005092 | LOC_Os01g02050 | Os01g0110700 | - | Detail |
| C1H9g20900 | 9:12,035,423-12,037,823 | - | C2H9g24788 | CX9g058102 | LOC_Os09g24490 | Os09g0410700 | - | Detail |
| C1H9g20141 | 9:12,047,191-12,048,447 | + | C2H9g22733 | CX9g055159 | - | - | - | Detail |
| C1H9g14098 | 9:12,054,850-12,056,899 | + | C2H9g29686 | CX9g057499 | - | Os09g0411500 | - | Detail |
| C1H9g27648 | 9:12,057,578-12,059,221 | - | C2H9g08999 | CX9g055250 | LOC_Os09g24520 | Os09g0411600 | - | Detail |
| C1H9g15710 | 9:12,060,097-12,062,297 | - | C2H9g24020 | CX9g055887 | LOC_Os09g24530 | Os09g0411650 | - | Detail |
| C1H9g26658 | 9:12,063,561-12,065,573 | - | C2H9g15723 | - | LOC_Os09g24540 | Os09g0411700 | - | Detail |
| C1H9g25817 | 9:12,070,509-12,071,525 | - | C2H9g30013 | CX9g056422 | LOC_Os09g24560 | Os09g0411900 | - | Detail |
| C1H9g11852 | 9:12,080,227-12,080,736 | - | C2H9g19569 | CX9g056828 | LOC_Os09g36830 | Os09g0412050 | - | Detail |
| C1H9g04539 | 9:12,081,452-12,084,659 | - | C2H9g29693 | CX9g055609 | LOC_Os09g24570 | Os09g0412200 | - | Detail |
| C1H9g10655 | 9:12,086,877-12,087,398 | - | C2H9g21780 | CX9g054907 | LOC_Os09g24580 | Os09g0412300 | - | Detail |
| C1H9g24887 | 9:12,097,302-12,097,676 | - | C2H9g24987 | CX9g056335 | LOC_Os09g24590 | Os09g0412400 | - | Detail |
| C1H9g25612 | 9:12,107,462-12,108,871 | + | C2H9g22954 | CX9g056498 | LOC_Os09g24620 | Os09g0412700 | - | Detail |
| C1H9g29027 | 9:12,111,255-12,112,766 | + | C2H9g08999 | CX9g057109 | LOC_Os09g24640 | Os09g0412900 | - | Detail |
| C1H9g10917 | 9:12,116,662-12,121,711 | + | C2H9g30609 | CX9g055582 | LOC_Os09g24650 | Os09g0413000 | - | Detail |
| C1H9g25606 | 9:12,122,597-12,125,827 | - | C2H9g23813 | CX9g054861 | LOC_Os09g24660 | Os09g0413100 | - | Detail |
| C1H9g01483 | 9:12,125,928-12,129,855 | + | C2H9g23311 | CX9g055611 | LOC_Os09g24670 | Os09g0413200 | - | Detail |
| C1H9g27670 | 9:12,132,894-12,135,332 | - | C2H9g07064 | CX9g055527 | LOC_Os09g24680 | Os09g0413300 | OsPPR1 | Detail |
| C1H9g13850 | 9:12,136,686-12,138,300 | - | C2H9g21107 | CX9g055730 | LOC_Os09g24690 | Os09g0413500 | - | Detail |
| C1H9g31189 | 9:12,139,771-12,144,382 | - | C2H9g10108 | CX9g055962 | LOC_Os09g24700 | Os09g0413600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g28299 | 5:22,170,070-22,171,101 | - | C1H5g17231 | CX5g038315 | LOC_Os05g45710 | Os05g0533500 | OsSAT1;3 | Detail |
| C2H5g13260 | 5:22,173,794-22,181,115 | + | C1H5g17232 | CX5g039556 | LOC_Os05g45720 | Os05g0533600 | SSIVB, OsSSIVb, SSIV-2, OsSSIV-2, SSIVb, SSIV-2 | Detail |
| C2H5g03217 | 5:22,181,740-22,183,798 | + | C1H5g27858 | CX5g039089 | LOC_Os05g45730 | Os05g0533700 | - | Detail |
| C2H5g09746 | 5:22,184,871-22,186,393 | + | C1H5g22620 | CX5g038471 | LOC_Os05g45740 | Os05g0533800 | - | Detail |
| C2H5g27500 | 5:22,187,563-22,191,307 | + | C1H5g12717 | CX5g038527 | LOC_Os05g45750 | Os05g0533900 | - | Detail |
| C2H5g28882 | 5:22,191,750-22,193,669 | - | C1H5g28841 | CX5g040105 | LOC_Os05g45760 | Os05g0534000 | - | Detail |
| C2H5g06715 | 5:22,194,656-22,196,891 | + | C1H5g15352 | CX5g036728 | LOC_Os05g45770 | Os05g0534100 | - | Detail |
| C2H5g12404 | 5:22,208,576-22,210,028 | + | C1H5g21827 | CX5g040749 | LOC_Os05g45810 | Os05g0534400 | OsCBL4 | Detail |
| C2H5g20385 | 5:22,210,537-22,213,936 | - | C1H5g13213 | CX5g037499 | LOC_Os05g45820 | Os05g0534500 | - | Detail |
| C2H5g26781 | 5:22,216,968-22,222,503 | - | C1H5g03368 | CX5g039192 | LOC_Os05g45830 | Os05g0534600 | - | Detail |
| C2H5g01370 | 5:22,224,945-22,230,054 | + | C1H5g18942 | CX5g040022 | LOC_Os05g45840 | Os05g0534800 | - | Detail |
| C2H5g21069 | 5:22,231,206-22,233,860 | + | C1H5g12782 | CX5g037833 | LOC_Os05g45850 | Os05g0534900 | - | Detail |
| C2H5g29794 | 5:22,237,286-22,240,510 | - | C1H5g14563 | CX5g037747 | LOC_Os05g45860 | Os05g0535100 | - | Detail |
| C2H5g19676 | 5:22,242,023-22,242,482 | + | C1H5g01171 | - | - | - | - | Detail |
| C2H5g22490 | 5:22,243,519-22,244,341 | - | C1H5g05296 | CX5g040472 | LOC_Os01g52020 | Os07g0631500 | - | Detail |
| C2H5g10427 | 5:22,244,622-22,246,760 | + | C1H5g29728 | CX5g038811 | LOC_Os05g45870 | Os05g0535200 | - | Detail |
| C2H5g08565 | 5:22,249,637-22,250,592 | + | C1H5g30804 | CX5g038750 | LOC_Os05g45870 | Os05g0535300 | - | Detail |
| C2H5g18762 | 5:22,252,723-22,254,144 | - | - | - | - | - | - | Detail |
| C2H5g02857 | 5:22,255,846-22,261,277 | - | - | - | - | - | - | Detail |
| C2H5g19368 | 5:22,263,889-22,267,361 | + | C1H5g31590 | CX5g037476 | LOC_Os05g45880 | Os05g0535400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |