| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g01326 | 1:30,278,642-30,283,698 | + | C2H1g24587 | CX1g000361 | LOC_Os01g58790 | Os01g0802100 | OsIspE, IspE, OsCMK, CMK | Detail |
| C1H1g24285 | 1:30,284,058-30,284,504 | - | C2H5g09380 | CX1g004944 | LOC_Os01g58800 | Os01g0802200 | - | Detail |
| C1H1g07782 | 1:30,290,357-30,291,268 | + | C2H5g19411 | CX1g004781 | LOC_Os01g58850 | Os01g0802600 | - | Detail |
| C1H1g15075 | 1:30,297,546-30,299,729 | - | C2H1g08686 | CX1g002565 | LOC_Os01g58860 | Os01g0802700 | OsPIN9 | Detail |
| C1H1g08773 | 1:30,305,163-30,306,251 | - | C2H1g10922 | CX1g003630 | LOC_Os01g58870 | Os01g0802850 | - | Detail |
| C1H1g24422 | 1:30,320,510-30,321,291 | + | C2H1g30330 | CX1g002172 | LOC_Os01g58890 | Os01g0803200 | - | Detail |
| C1H1g07293 | 1:30,332,316-30,334,119 | - | C2H1g25597 | CX1g000223 | LOC_Os01g58910 | Os01g0803300 | - | Detail |
| C1H1g24602 | 1:30,349,786-30,351,309 | + | C2H1g05023 | CX1g002651 | LOC_Os01g58960 | Os01g0803800 | CYP94D12, OsCYP94D12 | Detail |
| C1H1g19345 | 1:30,352,665-30,354,203 | + | C2H1g26033 | CX1g005013 | LOC_Os01g58970 | Os01g0803900 | CYP94D11, OsCYP94D11, OsCYPq1 | Detail |
| C1H1g07529 | 1:30,369,415-30,370,950 | + | C2H1g05023 | CX1g005013 | LOC_Os01g59020 | Os01g0804400 | CYP94D7, OsCYP94D7 | Detail |
| C1H1g00313 | 1:30,374,422-30,375,975 | + | C2H1g05023 | CX1g005013 | LOC_Os01g59050 | Os01g0804900 | CYP94D6, OsCYP94D6 | Detail |
| C1H1g26715 | 1:30,377,934-30,378,206 | - | C2H1g28126 | CX1g005195 | LOC_Os01g59060 | Os01g0805000 | - | Detail |
| C1H1g18258 | 1:30,378,461-30,379,822 | + | - | CX1g004717 | LOC_Os01g59070 | Os01g0805100 | - | Detail |
| C1H1g02848 | 1:30,380,989-30,382,207 | - | C2H1g18483 | CX1g000028 | LOC_Os01g59080 | Os01g0805200 | - | Detail |
| C1H1g13654 | 1:30,382,319-30,388,020 | + | C2H1g25136 | CX1g000520 | LOC_Os01g59100 | Os01g0805400 | Os6 | Detail |
| C1H1g23718 | 1:30,390,452-30,392,930 | + | C2H1g05127 | CX1g002439 | LOC_Os01g59110 | Os01g0805500 | - | Detail |
| C1H1g31482 | 1:30,393,285-30,396,383 | - | C2H1g05794 | CX1g004982 | LOC_Os01g59120 | Os01g0805600 | Orysa;CycB1;1 | Detail |
| C1H1g30942 | 1:30,397,326-30,403,604 | - | C2H1g03484 | CX1g001600 | LOC_Os01g59130 | Os01g0805700 | - | Detail |
| C1H1g01953 | 1:30,405,204-30,408,876 | - | C2H1g17768 | CX1g000155 | LOC_Os01g59140 | Os01g0805800 | - | Detail |
| C1H1g21118 | 1:30,410,297-30,413,952 | + | C2H1g29760 | CX1g003536 | LOC_Os01g59150 | Os01g0805900 | Ostub16, OsTUB4 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g04825 | 1:8,664,268-8,665,704 | - | - | CX1g001016 | LOC_Os01g16930 | Os01g0276400 | - | Detail |
| C2H1g11604 | 1:8,666,252-8,670,235 | - | C1H1g24775 | CX1g003930 | LOC_Os01g16940 | Os01g0276500 | - | Detail |
| C2H1g06104 | 1:8,671,620-8,672,654 | + | C1H1g04999 | CX1g004479 | LOC_Os01g16950 | Os01g0276600 | - | Detail |
| C2H1g19690 | 1:8,675,327-8,680,587 | - | C1H1g24762 | CX1g001281 | LOC_Os01g16960 | Os01g0276700 | - | Detail |
| C2H1g18824 | 1:8,683,004-8,689,974 | - | C1H1g09923 | CX1g002381 | LOC_Os01g16970 | Os01g0276800 | - | Detail |
| C2H1g22419 | 1:8,692,125-8,692,583 | - | - | - | LOC_Os01g16980 | Os01g0276900 | - | Detail |
| C2H1g19986 | 1:8,721,050-8,725,169 | + | C1H1g21978 | CX1g006477 | LOC_Os01g17000 | Os01g0277500 | OsDof4 | Detail |
| C2H1g07072 | 1:8,725,370-8,731,847 | - | C1H1g27208 | CX1g007267 | LOC_Os01g17010 | Os01g0277600 | - | Detail |
| C2H1g19392 | 1:8,737,582-8,740,735 | + | C1H1g17418 | CX1g005265 | LOC_Os01g17020 | Os01g0277700 | - | Detail |
| C2H1g04598 | 1:8,751,494-8,754,199 | + | C1H1g04503 | CX1g005153 | LOC_Os01g17040 | Os01g0277900 | - | Detail |
| C2H1g29384 | 1:8,756,851-8,757,564 | - | - | CX1g000586 | LOC_Os01g17050 | Os01g0278000 | OsVQ1 | Detail |
| C2H1g28131 | 1:8,783,850-8,792,241 | - | C1H3g10684 | CX1g000790 | LOC_Os03g42050 | Os03g0616700 | - | Detail |
| C2H1g07110 | 1:8,793,868-8,797,361 | - | C1H1g30954 | CX1g000790 | - | Os01g0587900 | - | Detail |
| C2H1g16144 | 1:8,812,830-8,818,198 | + | C1H1g02087 | CX1g004265 | LOC_Os01g17070 | Os01g0278600 | - | Detail |
| C2H1g08246 | 1:8,823,494-8,827,517 | + | C1H1g02797 | CX1g006647 | LOC_Os01g17130 | Os01g0807800 | - | Detail |
| C2H1g26662 | 1:8,833,428-8,834,574 | + | C1H1g13085 | CX1g006879 | LOC_Os01g17150 | Os01g0278900 | - | Detail |
| C2H1g24803 | 1:8,837,251-8,839,210 | + | C1H1g02366 | CX1g003704 | - | Os01g0278950 | - | Detail |
| C2H1g17354 | 1:8,839,255-8,840,826 | + | C1H1g02366 | CX1g003704 | - | Os01g0278950 | - | Detail |
| C2H1g17913 | 1:8,843,229-8,845,897 | + | C1H1g14516 | CX1g003816 | LOC_Os01g17160 | Os01g0279000 | - | Detail |
| C2H1g17524 | 1:8,849,140-8,851,309 | + | C1H1g07749 | CX1g000834 | LOC_Os01g17170 | Os01g0279100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |