| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g10547 | 9:11,474,854-11,475,303 | - | - | CX9g055979 | LOC_Os09g23370 | Os09g0397700 | - | Detail |
| C1H9g24684 | 9:11,475,605-11,481,114 | + | C2H9g18131 | CX9g057737 | LOC_Os09g23380 | Os09g0397900 | - | Detail |
| C1H9g15364 | 9:11,490,880-11,492,461 | - | C2H9g06160 | - | LOC_Os09g23334 | Os09g0397100 | - | Detail |
| C1H9g09191 | 9:11,496,514-11,497,471 | - | C2H9g10017 | CX9g057334 | - | - | - | Detail |
| C1H9g02879 | 9:11,502,981-11,503,238 | + | - | - | LOC_Os09g23420 | - | - | Detail |
| C1H9g14357 | 9:11,540,086-11,540,355 | + | - | - | - | - | - | Detail |
| C1H9g01744 | 9:11,545,767-11,546,042 | + | - | - | - | - | - | Detail |
| C1H9g04476 | 9:11,552,194-11,553,264 | - | C2H9g26695 | CX9g057630 | - | - | - | Detail |
| C1H9g24092 | 9:11,568,172-11,568,435 | + | - | CX9g054909 | - | Os09g0399502 | - | Detail |
| C1H9g14660 | 9:11,579,968-11,581,315 | - | C2H9g17549 | CX9g057398 | LOC_Os09g23530 | Os09g0399800 | - | Detail |
| C1H9g20560 | 9:11,583,814-11,585,668 | - | C2H9g11831 | CX9g054869 | LOC_Os09g23540 | Os09g0400000 | CAD8B | Detail |
| C1H9g22888 | 9:11,591,549-11,593,575 | + | C2H9g00236 | CX9g056306 | LOC_Os09g23550 | Os09g0400300 | - | Detail |
| C1H9g31530 | 9:11,596,363-11,598,303 | + | C2H9g06042 | CX9g054928 | LOC_Os09g23570 | Os09g0400500 | - | Detail |
| C1H9g28125 | 9:11,604,915-11,605,217 | + | - | CX9g054916 | LOC_Os09g23590 | Os09g0400700 | - | Detail |
| C1H9g11131 | 9:11,605,767-11,606,244 | - | - | - | - | - | - | Detail |
| C1H9g17981 | 9:11,620,236-11,621,253 | + | C2H9g02341 | CX9g058058 | LOC_Os09g23620 | Os09g0401000 | Os2R_MYB82 | Detail |
| C1H9g21372 | 9:11,638,880-11,642,390 | + | C2H9g11860 | CX9g057812 | LOC_Os09g23640 | Os09g0401100 | ABCG21, OsABCG21, STR1 | Detail |
| C1H9g02031 | 9:11,643,122-11,644,138 | - | C2H9g15858 | CX9g055812 | LOC_Os09g23650 | Os09g0401200 | TRXH3, antiSTR1 | Detail |
| C1H9g17030 | 9:11,653,927-11,656,132 | - | C2H9g15858 | CX9g055812 | LOC_Os09g23650 | Os09g0401200 | TRXH3, antiSTR1 | Detail |
| C1H9g22130 | 9:11,656,486-11,660,729 | - | C2H9g19314 | CX9g057187 | LOC_Os09g23650 | Os09g0401300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g05175 | 12:18,612,120-18,614,699 | - | C1H12g27529 | CX12g016909 | LOC_Os12g36640 | Os12g0552500 | - | Detail |
| C2H12g12611 | 12:18,643,871-18,645,485 | + | C1H12g15786 | CX12g015364 | LOC_Os12g36660 | Os12g0552600 | TGW12a, qTGW12a | Detail |
| C2H12g17412 | 12:18,651,995-18,655,567 | + | C1H12g29275 | - | - | - | - | Detail |
| C2H12g05930 | 12:18,655,623-18,659,418 | + | C1H12g29275 | CX12g016435 | LOC_Os12g36670 | Os12g0552700 | - | Detail |
| C2H12g03052 | 12:18,663,825-18,666,317 | + | C1H12g24562 | CX12g015172 | LOC_Os12g36680 | Os12g0552800 | - | Detail |
| C2H12g02154 | 12:18,669,185-18,672,797 | - | C1H12g15410 | CX12g018213 | LOC_Os12g36690 | Os12g0516300 | - | Detail |
| C2H12g06633 | 12:18,675,354-18,675,587 | + | C1H12g01930 | CX12g016931 | - | - | - | Detail |
| C2H12g27584 | 12:18,684,117-18,686,666 | + | C1H12g05813 | - | LOC_Os12g36740 | Os12g0516700 | - | Detail |
| C2H12g15252 | 12:18,688,119-18,691,324 | - | C1H12g29363 | CX12g016031 | LOC_Os12g36750 | Os12g0516800 | - | Detail |
| C2H12g14585 | 12:18,696,663-18,706,850 | - | C1H12g01446 | CX12g016097 | LOC_Os12g36760 | Os12g0554400 | - | Detail |
| C2H12g15590 | 12:18,708,188-18,712,821 | - | C1H12g23720 | CX12g016599 | LOC_Os12g36770 | Os12g0554500 | - | Detail |
| C2H12g04076 | 12:18,735,632-18,739,412 | + | C1H12g01737 | CX12g018046 | LOC_Os12g36810 | Os12g0554800 | - | Detail |
| C2H12g06219 | 12:18,744,095-18,744,872 | + | C1H12g12652 | - | LOC_Os12g36830 | Os12g0555000 | RSOsPR10 | Detail |
| C2H12g04688 | 12:18,748,457-18,749,381 | + | C1H12g26248 | - | LOC_Os12g36840 | Os12g0555100 | - | Detail |
| C2H12g04650 | 12:18,755,015-18,756,454 | + | C1H12g09962 | - | LOC_Os12g36850 | Os12g0555200 | RPR10b | Detail |
| C2H12g30203 | 12:18,760,122-18,761,122 | + | C1H12g15174 | - | LOC_Os12g36860 | Os12g0555300 | RPR10c | Detail |
| C2H12g14119 | 12:18,763,230-18,764,525 | + | C1H12g06069 | - | LOC_Os12g36880 | Os12g0555500 | OsPR10a, PBZ1 | Detail |
| C2H12g14752 | 12:18,767,562-18,772,083 | - | C1H12g31071 | CX12g016121 | LOC_Os12g36890 | Os12g0555600 | ND1, CSLD4, OsCSLD4, OsCD1, CD1, SPO1 | Detail |
| C2H12g19509 | 12:18,780,869-18,785,650 | + | C1H12g15134 | CX12g015599 | LOC_Os12g36900 | Os12g0556100 | - | Detail |
| C2H12g19756 | 12:18,792,886-18,797,069 | + | C1H12g31407 | CX12g016424 | LOC_Os12g36910 | Os12g0556200 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |