| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g11219 | 9:11,219,575-11,224,504 | + | C2H9g01293 | CX9g057799 | LOC_Os09g22540 | Os09g0393200 | OsJMJ718 | Detail |
| C1H9g27811 | 9:11,225,744-11,227,026 | + | - | - | - | - | - | Detail |
| C1H9g30997 | 9:11,249,210-11,249,599 | - | C2H9g12185 | CX9g057399 | - | Os09g0393501 | - | Detail |
| C1H9g16300 | 9:11,249,722-11,250,111 | + | C2H9g07203 | CX9g057399 | - | Os09g0393801 | - | Detail |
| C1H9g14500 | 9:11,251,642-11,256,673 | - | C2H9g12185 | CX9g057399 | LOC_Os09g23070 | Os09g0394100 | - | Detail |
| C1H9g09905 | 9:11,258,995-11,268,476 | - | C2H9g15186 | CX9g057598 | LOC_Os09g23084 | Os09g0394300 | - | Detail |
| C1H9g21012 | 9:11,284,272-11,288,513 | + | C2H9g25736 | CX9g057002 | LOC_Os09g23110 | Os09g0452300 | OspGlcT4 | Detail |
| C1H9g11161 | 9:11,295,068-11,297,057 | - | C2H9g21887 | CX9g057018 | LOC_Os09g23140 | Os09g0394600 | - | Detail |
| C1H9g04354 | 9:11,301,798-11,305,812 | - | C2H9g21887 | CX9g056382 | LOC_Os09g23150 | Os09g0394700 | - | Detail |
| C1H9g06730 | 9:11,306,250-11,306,810 | - | C2H9g21753 | - | - | - | - | Detail |
| C1H9g07311 | 9:11,311,587-11,316,610 | + | C2H9g12341 | CX9g056041 | LOC_Os09g23160 | Os09g0394900 | - | Detail |
| C1H9g00378 | 9:11,367,073-11,373,898 | + | C2H9g06605 | CX9g057525 | LOC_Os09g23200 | Os09g0395300 | RL9, rl9, OsADD1 | Detail |
| C1H9g06586 | 9:11,387,716-11,389,122 | - | C2H9g01641 | CX9g056960 | LOC_Os09g23220 | Os09g0395600 | - | Detail |
| C1H9g04135 | 9:11,400,699-11,403,472 | + | C2H9g28359 | CX9g056289 | LOC_Os09g23280 | Os09g0396300 | - | Detail |
| C1H9g25860 | 9:11,428,690-11,430,473 | + | C2H9g19158 | CX9g055871 | LOC_Os09g23300 | Os09g0396900 | OsVIT2 | Detail |
| C1H9g21880 | 9:11,434,485-11,435,544 | + | C2H9g08261 | - | LOC_Os09g23334 | Os09g0397100 | - | Detail |
| C1H9g26099 | 9:11,439,494-11,442,430 | + | C2H9g14156 | - | LOC_Os09g23334 | Os09g0397100 | - | Detail |
| C1H9g00991 | 9:11,443,689-11,444,699 | + | C2H9g00794 | - | LOC_Os09g23340 | Os09g0397200 | - | Detail |
| C1H9g07186 | 9:11,462,035-11,466,414 | + | C2H9g25337 | CX9g056954 | LOC_Os09g23350 | Os09g0397300 | - | Detail |
| C1H9g18089 | 9:11,467,425-11,470,626 | - | C2H9g27674 | CX9g057642 | LOC_Os09g23360 | Os09g0397400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g05915 | 7:19,414,116-19,416,555 | + | C1H7g08535 | CX7g049068 | LOC_Os07g39530 | Os07g0584200 | - | Detail |
| C2H7g08325 | 7:19,436,359-19,440,865 | + | C1H7g30537 | CX7g047975 | LOC_Os07g39560 | Os07g0584500 | - | Detail |
| C2H7g01401 | 7:19,447,972-19,450,928 | + | C1H7g23144 | CX7g047283 | LOC_Os07g39590 | Os07g0584900 | - | Detail |
| C2H7g01095 | 7:19,464,957-19,465,682 | - | - | - | - | - | - | Detail |
| C2H7g14449 | 7:19,466,988-19,469,370 | + | C1H7g20939 | CX7g048420 | LOC_Os07g39620 | Os07g0585000 | - | Detail |
| C2H7g18029 | 7:19,474,895-19,480,979 | + | C1H7g17896 | CX7g049289 | LOC_Os07g39630 | Os07g0585100 | OsMO25A, OsMO25A1 | Detail |
| C2H7g05447 | 7:19,481,937-19,482,911 | - | C1H7g10568 | CX7g048593 | LOC_Os07g39640 | Os07g0585200 | - | Detail |
| C2H7g25479 | 7:19,492,931-19,494,645 | + | C1H7g00944 | - | LOC_Os07g39680 | Os07g0585500 | OSPGYRP, OsPGYRP | Detail |
| C2H7g11944 | 7:19,495,495-19,502,747 | - | C1H7g09785 | CX7g050118 | LOC_Os07g39690 | Os07g0585600 | - | Detail |
| C2H7g28175 | 7:19,507,772-19,508,782 | + | C1H7g25396 | - | LOC_Os07g39700 | Os07g0585700 | SDR4, Sdr4, OsSdr4, OsSdr4-n, OsSdr4-k | Detail |
| C2H7g05083 | 7:19,509,478-19,513,660 | - | C1H7g16934 | CX7g047965 | LOC_Os07g39710 | Os07g0585800 | - | Detail |
| C2H7g28026 | 7:19,518,471-19,522,057 | - | C1H7g26737 | CX7g049839 | LOC_Os07g39730 | Os07g0586000 | - | Detail |
| C2H7g03070 | 7:19,523,926-19,525,878 | - | C1H7g11177 | CX7g046857 | LOC_Os07g39740 | Os07g0586100 | PChE | Detail |
| C2H7g20298 | 7:19,527,188-19,531,034 | - | C1H7g31708 | CX7g050090 | LOC_Os07g39750 | Os07g0586200 | - | Detail |
| C2H7g01650 | 7:19,539,187-19,545,912 | + | C1H7g28144 | CX7g046227 | LOC_Os07g39780 | Os07g0586500 | - | Detail |
| C2H7g25217 | 7:19,548,054-19,551,239 | - | C1H7g03308 | CX7g049224 | LOC_Os07g39800 | Os07g0586700 | - | Detail |
| C2H7g30340 | 7:19,592,283-19,594,691 | + | C1H7g04106 | CX7g047969 | LOC_Os07g39830 | Os07g0587000 | - | Detail |
| C2H7g05226 | 7:19,595,556-19,598,379 | - | C1H7g17905 | CX7g049988 | - | - | - | Detail |
| C2H7g03999 | 7:19,601,342-19,604,412 | - | C1H7g10975 | CX7g047961 | LOC_Os07g39840 | Os07g0587100 | - | Detail |
| C2H7g16477 | 7:19,606,919-19,612,851 | - | C1H7g12981 | CX7g047553 | LOC_Os07g39850 | Os07g0587250 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |