| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28518 | 9:10,956,101-10,956,906 | + | C2H9g24898 | CX9g055525 | LOC_Os09g21380 | Os09g0381600 | - | Detail |
| C1H9g10974 | 9:10,957,499-10,969,112 | - | C2H9g18647 | CX9g056093 | LOC_Os09g21410 | Os09g0381800 | - | Detail |
| C1H9g19657 | 9:10,973,383-10,977,249 | - | C2H9g18647 | CX9g056093 | LOC_Os09g21430 | Os09g0382120 | - | Detail |
| C1H9g14369 | 9:10,984,635-10,988,181 | - | C2H9g06489 | CX9g055130 | LOC_Os09g21450 | Os09g0382300 | - | Detail |
| C1H9g10046 | 9:10,991,403-10,993,194 | - | C2H9g10297 | CX9g058028 | LOC_Os09g21460 | Os09g0382400 | - | Detail |
| C1H9g21689 | 9:10,994,697-10,997,041 | - | C2H9g07495 | CX9g056330 | LOC_Os09g21470 | Os09g0382500 | - | Detail |
| C1H9g23009 | 9:11,009,108-11,012,280 | + | C2H9g06304 | - | LOC_Os09g21490 | Os09g0294000 | - | Detail |
| C1H9g07650 | 9:11,029,889-11,035,388 | + | C2H9g14634 | CX9g055150 | LOC_Os09g21510 | Os09g0383300 | - | Detail |
| C1H9g10004 | 9:11,038,979-11,043,165 | + | C2H9g24570 | CX9g056451 | LOC_Os09g21520 | Os09g0383400 | - | Detail |
| C1H9g28479 | 9:11,093,523-11,098,163 | + | - | CX9g055899 | LOC_Os09g21660 | Os09g0384900 | qGZn9a | Detail |
| C1H9g01612 | 9:11,105,383-11,106,606 | - | - | CX9g055899 | LOC_Os09g21660 | Os09g0384900 | qGZn9a | Detail |
| C1H9g15648 | 9:11,134,707-11,135,261 | - | - | CX9g055937 | LOC_Os09g21710 | Os09g0385700 | ASL4 | Detail |
| C1H9g25406 | 9:11,140,282-11,140,533 | + | C2H9g24035 | - | - | - | - | Detail |
| C1H9g23792 | 9:11,140,579-11,142,216 | - | C2H8g28785 | CX9g055164 | LOC_Os09g21740 | Os09g0386200 | - | Detail |
| C1H9g20064 | 9:11,153,280-11,156,999 | - | C2H9g26646 | CX9g057745 | LOC_Os09g21760 | Os09g0386400 | - | Detail |
| C1H9g07383 | 9:11,160,290-11,163,198 | + | C2H9g02560 | CX9g056499 | LOC_Os09g21770 | Os09g0386500 | OsEBL2 | Detail |
| C1H9g16738 | 9:11,164,392-11,170,651 | - | C2H9g07150 | CX9g057590 | LOC_Os09g21780 | Os09g0386600 | - | Detail |
| C1H9g23102 | 9:11,183,255-11,187,623 | + | C2H9g12396 | CX9g056020 | LOC_Os09g22440 | Os09g0392000 | - | Detail |
| C1H9g00211 | 9:11,188,830-11,192,588 | + | C2H9g04209 | CX9g054898 | LOC_Os09g22450 | Os09g0392100 | OsEDS1 | Detail |
| C1H9g02506 | 9:11,207,383-11,209,019 | + | C2H9g17686 | - | - | Os12g0275400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01230 | 3:10,307,365-10,308,510 | + | C1H3g19861 | CX3g029583 | LOC_Os03g20500 | Os03g0321300 | - | Detail |
| C2H3g17781 | 3:10,308,593-10,308,889 | - | C1H3g31579 | - | - | - | - | Detail |
| C2H3g10177 | 3:10,316,260-10,322,166 | - | C1H3g05314 | CX3g030418 | LOC_Os03g20520 | Os03g0321400 | - | Detail |
| C2H3g16949 | 3:10,324,466-10,330,856 | - | C1H3g24166 | CX3g027287 | LOC_Os03g20530 | Os03g0321500 | OsBBP1 | Detail |
| C2H3g07472 | 3:10,345,050-10,346,093 | + | C1H3g22188 | CX3g030570 | LOC_Os03g20550 | Os03g0321700 | OsWRKY31, OsWRKY55 | Detail |
| C2H3g22893 | 3:10,347,237-10,347,962 | - | C1H3g31320 | CX3g029278 | LOC_Os03g20560 | Os03g0321800 | - | Detail |
| C2H3g22031 | 3:10,348,238-10,349,180 | + | C1H3g15973 | CX3g025622 | LOC_Os03g20570 | Os03g0321900 | - | Detail |
| C2H3g29406 | 3:10,351,022-10,357,302 | - | C1H3g10139 | CX3g027052 | LOC_Os03g20580 | Os03g0322000 | - | Detail |
| C2H3g13047 | 3:10,357,687-10,358,181 | + | C1H3g01616 | CX3g026700 | LOC_Os03g20590 | - | - | Detail |
| C2H3g25454 | 3:10,358,614-10,358,970 | - | C1H3g09864 | CX3g029175 | LOC_Os03g20600 | Os03g0322200 | - | Detail |
| C2H3g26982 | 3:10,361,368-10,365,986 | + | C1H3g20781 | CX3g026757 | LOC_Os03g20630 | Os03g0322500 | - | Detail |
| C2H3g00494 | 3:10,366,789-10,369,051 | + | C1H3g30541 | CX3g029187 | LOC_Os03g20640 | Os03g0322600 | - | Detail |
| C2H3g22567 | 3:10,369,392-10,372,866 | - | C1H3g17698 | CX3g029676 | LOC_Os03g20650 | Os03g0322700 | - | Detail |
| C2H3g08879 | 3:10,386,065-10,390,118 | + | C1H3g30170 | CX3g029908 | LOC_Os03g20670 | Os03g0322800 | - | Detail |
| C2H3g26182 | 3:10,391,164-10,392,277 | - | C1H3g03964 | CX3g027559 | LOC_Os03g20680 | Os03g0322900 | LEA17, OsLEA17, OsLEA3-2, LEA3-2 | Detail |
| C2H3g25815 | 3:10,397,789-10,403,134 | + | - | CX3g027985 | LOC_Os03g20700 | Os03g0323200 | OsCHLH | Detail |
| C2H3g04983 | 3:10,407,133-10,412,570 | + | C1H3g04844 | CX3g028829 | LOC_Os03g20720 | Os03g0323500 | - | Detail |
| C2H3g18862 | 3:10,413,313-10,413,825 | - | C1H3g01461 | CX3g028214 | LOC_Os03g20730 | Os03g0323600 | - | Detail |
| C2H3g17326 | 3:10,422,832-10,428,321 | + | C1H3g26967 | CX3g025044 | LOC_Os03g20750 | Os03g0323800 | OsVDAC8 | Detail |
| C2H3g13354 | 3:10,433,039-10,434,380 | + | C1H3g06354 | CX3g030983 | LOC_Os03g20760 | Os03g0323900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |