| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g28518 | 9:10,956,101-10,956,906 | + | C2H9g24898 | CX9g055525 | LOC_Os09g21380 | Os09g0381600 | - | Detail |
| C1H9g10974 | 9:10,957,499-10,969,112 | - | C2H9g18647 | CX9g056093 | LOC_Os09g21410 | Os09g0381800 | - | Detail |
| C1H9g19657 | 9:10,973,383-10,977,249 | - | C2H9g18647 | CX9g056093 | LOC_Os09g21430 | Os09g0382120 | - | Detail |
| C1H9g14369 | 9:10,984,635-10,988,181 | - | C2H9g06489 | CX9g055130 | LOC_Os09g21450 | Os09g0382300 | - | Detail |
| C1H9g10046 | 9:10,991,403-10,993,194 | - | C2H9g10297 | CX9g058028 | LOC_Os09g21460 | Os09g0382400 | - | Detail |
| C1H9g21689 | 9:10,994,697-10,997,041 | - | C2H9g07495 | CX9g056330 | LOC_Os09g21470 | Os09g0382500 | - | Detail |
| C1H9g23009 | 9:11,009,108-11,012,280 | + | C2H9g06304 | - | LOC_Os09g21490 | Os09g0294000 | - | Detail |
| C1H9g07650 | 9:11,029,889-11,035,388 | + | C2H9g14634 | CX9g055150 | LOC_Os09g21510 | Os09g0383300 | - | Detail |
| C1H9g10004 | 9:11,038,979-11,043,165 | + | C2H9g24570 | CX9g056451 | LOC_Os09g21520 | Os09g0383400 | - | Detail |
| C1H9g28479 | 9:11,093,523-11,098,163 | + | - | CX9g055899 | LOC_Os09g21660 | Os09g0384900 | qGZn9a | Detail |
| C1H9g01612 | 9:11,105,383-11,106,606 | - | - | CX9g055899 | LOC_Os09g21660 | Os09g0384900 | qGZn9a | Detail |
| C1H9g15648 | 9:11,134,707-11,135,261 | - | - | CX9g055937 | LOC_Os09g21710 | Os09g0385700 | ASL4 | Detail |
| C1H9g25406 | 9:11,140,282-11,140,533 | + | C2H9g24035 | - | - | - | - | Detail |
| C1H9g23792 | 9:11,140,579-11,142,216 | - | C2H8g28785 | CX9g055164 | LOC_Os09g21740 | Os09g0386200 | - | Detail |
| C1H9g20064 | 9:11,153,280-11,156,999 | - | C2H9g26646 | CX9g057745 | LOC_Os09g21760 | Os09g0386400 | - | Detail |
| C1H9g07383 | 9:11,160,290-11,163,198 | + | C2H9g02560 | CX9g056499 | LOC_Os09g21770 | Os09g0386500 | OsEBL2 | Detail |
| C1H9g16738 | 9:11,164,392-11,170,651 | - | C2H9g07150 | CX9g057590 | LOC_Os09g21780 | Os09g0386600 | - | Detail |
| C1H9g23102 | 9:11,183,255-11,187,623 | + | C2H9g12396 | CX9g056020 | LOC_Os09g22440 | Os09g0392000 | - | Detail |
| C1H9g00211 | 9:11,188,830-11,192,588 | + | C2H9g04209 | CX9g054898 | LOC_Os09g22450 | Os09g0392100 | OsEDS1 | Detail |
| C1H9g02506 | 9:11,207,383-11,209,019 | + | C2H9g17686 | - | - | Os12g0275400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g00833 | 3:6,156,874-6,159,740 | - | C1H3g13331 | CX3g027611 | LOC_Os03g12930 | Os03g0231900 | - | Detail |
| C2H3g09594 | 3:6,162,907-6,164,923 | - | C1H3g17846 | CX3g030152 | LOC_Os03g12940 | Os03g0231950 | - | Detail |
| C2H3g04826 | 3:6,169,883-6,171,313 | - | C1H3g04613 | CX3g030910 | LOC_Os03g12940 | Os03g0232000 | OsFBO13 | Detail |
| C2H3g04774 | 3:6,176,440-6,180,711 | - | C1H3g30000 | CX3g029956 | LOC_Os03g12950 | Os03g0232200 | - | Detail |
| C2H3g26123 | 3:6,213,044-6,213,472 | + | C1H3g07150 | CX3g028212 | LOC_Os03g12990 | Os03g0232400 | - | Detail |
| C2H3g04799 | 3:6,217,496-6,217,914 | - | C1H3g22613 | CX3g028040 | - | Os02g0738300 | - | Detail |
| C2H3g26449 | 3:6,218,204-6,220,951 | + | C1H3g28102 | CX3g028651 | LOC_Os03g13000 | Os03g0232500 | - | Detail |
| C2H3g15250 | 3:6,226,447-6,227,826 | - | C1H3g02271 | CX3g031218 | LOC_Os03g13010 | Os03g0232600 | ELF1, OsPUB31, OsPUB75, TUD1, OsTUD1 | Detail |
| C2H3g13166 | 3:6,242,290-6,244,009 | - | C1H3g01497 | CX3g029569 | LOC_Os03g13030 | Os03g0232800 | - | Detail |
| C2H3g05297 | 3:6,245,343-6,249,107 | - | C1H3g06697 | CX3g027690 | LOC_Os03g13040 | Os03g0232900 | - | Detail |
| C2H3g03038 | 3:6,259,189-6,260,716 | + | C1H3g26874 | CX3g025391 | LOC_Os03g13050 | Os03g0233000 | - | Detail |
| C2H3g18690 | 3:6,262,896-6,263,675 | - | C1H3g16800 | CX3g030154 | LOC_Os03g13070 | Os03g0233200 | - | Detail |
| C2H3g14812 | 3:6,265,248-6,268,840 | - | C1H3g06079 | CX3g029185 | LOC_Os03g13080 | Os03g0233300 | OsLysM-RLK2, OsLYK5, OsNFR5/OsRLK2 | Detail |
| C2H3g23005 | 3:6,272,046-6,275,587 | + | C1H3g06632 | CX3g028548 | LOC_Os03g13100 | Os03g0233500 | - | Detail |
| C2H3g09799 | 3:6,279,462-6,283,564 | + | C1H3g16553 | CX3g029407 | LOC_Os03g13130 | Os03g0233800 | - | Detail |
| C2H3g00329 | 3:6,284,070-6,297,053 | - | - | - | - | - | - | Detail |
| C2H3g17247 | 3:6,299,016-6,299,858 | - | C1H3g27731 | CX3g025432 | LOC_Os03g13140 | Os03g0233900 | Hb1, OsPgb1.1 | Detail |
| C2H3g15076 | 3:6,302,555-6,307,791 | + | - | CX3g028989 | LOC_Os03g21310 | - | - | Detail |
| C2H3g00667 | 3:6,318,526-6,319,400 | + | C1H3g19664 | CX3g027207 | LOC_Os03g13150 | Os03g0234000 | - | Detail |
| C2H3g02090 | 3:6,321,649-6,322,638 | + | C1H3g02151 | CX3g030474 | LOC_Os03g13160 | Os03g0234100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |