| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g23707 | 9:10,696,265-10,698,754 | + | C2H9g21285 | CX9g058046 | LOC_Os09g20970 | Os09g0376600 | - | Detail |
| C1H9g17391 | 9:10,702,865-10,704,025 | + | C2H9g14838 | CX9g056454 | LOC_Os09g20980 | Os09g0376700 | RRF1 | Detail |
| C1H9g30567 | 9:10,709,908-10,715,813 | - | C2H9g05383 | CX9g055601 | LOC_Os09g20990 | Os09g0376800 | - | Detail |
| C1H9g29995 | 9:10,729,246-10,733,876 | - | C2H9g05268 | CX9g056662 | LOC_Os09g21000 | Os09g0376900 | - | Detail |
| C1H9g21881 | 9:10,762,636-10,762,884 | - | C2H9g20413 | CX9g057809 | LOC_Os09g21090 | - | - | Detail |
| C1H9g20818 | 9:10,777,512-10,783,843 | + | C2H9g01045 | - | LOC_Os09g21100 | - | - | Detail |
| C1H9g31308 | 9:10,787,219-10,792,419 | - | C2H9g29285 | CX9g055569 | LOC_Os09g21110 | Os09g0378300 | - | Detail |
| C1H9g27440 | 9:10,795,300-10,795,599 | - | C2H9g17709 | - | - | - | - | Detail |
| C1H9g30448 | 9:10,805,398-10,807,542 | + | C2H9g02081 | CX9g057907 | LOC_Os09g21120 | Os09g0378700 | - | Detail |
| C1H9g04683 | 9:10,827,284-10,829,075 | - | C2H9g05334 | CX9g056901 | LOC_Os09g21170 | Os09g0379400 | - | Detail |
| C1H9g06561 | 9:10,829,444-10,830,535 | - | - | - | - | - | - | Detail |
| C1H9g09879 | 9:10,833,241-10,837,032 | + | C2H9g04315 | - | - | - | - | Detail |
| C1H9g16223 | 9:10,838,620-10,840,095 | - | C2H9g13405 | CX9g056457 | LOC_Os09g21170 | Os09g0379400 | - | Detail |
| C1H9g24346 | 9:10,847,517-10,848,324 | + | C2H9g08492 | CX9g056066 | - | - | - | Detail |
| C1H9g09756 | 9:10,864,470-10,866,689 | - | C2H9g24966 | CX9g056903 | LOC_Os09g21210 | Os09g0379900 | - | Detail |
| C1H9g03748 | 9:10,876,065-10,880,211 | + | C2H9g07796 | CX9g055882 | LOC_Os09g21230 | Os09g0380050 | - | Detail |
| C1H9g24623 | 9:10,887,558-10,889,785 | + | C2H9g21407 | CX9g055229 | LOC_Os09g21250 | Os09g0380200 | OsV<sub>5A</sub>, YLC1 | Detail |
| C1H9g30696 | 9:10,893,263-10,895,284 | + | C2H9g18507 | CX9g057063 | LOC_Os09g21260 | Os09g0380300 | - | Detail |
| C1H9g01526 | 9:10,920,744-10,921,790 | + | - | CX9g054965 | LOC_Os09g21290 | Os09g0380600 | - | Detail |
| C1H9g04772 | 9:10,936,627-10,941,052 | + | C2H9g07225 | CX9g055269 | LOC_Os09g21340 | Os09g0381100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g23511 | 1:19,802,539-19,808,054 | + | C1H1g22058 | CX1g001079 | LOC_Os01g39480 | Os01g0575701 | - | Detail |
| C2H1g23392 | 1:19,864,831-19,868,195 | + | C1H1g30169 | CX1g004267 | LOC_Os01g39580 | Os01g0577300 | PSH1, Rb2 | Detail |
| C2H1g00498 | 1:19,879,386-19,882,883 | - | C1H1g25385 | CX1g005578 | LOC_Os01g39600 | Os01g0577600 | - | Detail |
| C2H1g08618 | 1:19,897,489-19,898,531 | - | C1H1g03498 | CX1g005347 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| C2H1g04424 | 1:19,899,125-19,902,478 | - | C1H1g03498 | CX1g005347 | LOC_Os01g39630 | Os01g0578000 | RAD51C, RAD51C-3 | Detail |
| C2H1g11258 | 1:19,906,084-19,909,922 | - | C1H1g20612 | CX1g003861 | LOC_Os01g39650 | Os01g0578200 | - | Detail |
| C2H1g04472 | 1:19,912,609-19,914,349 | + | C1H1g26503 | CX1g000177 | LOC_Os01g39670 | Os01g0578500 | SAF, SaF, OsFbox019, OsFbox19, Os_F0070 | Detail |
| C2H1g18851 | 1:19,916,240-19,918,008 | + | C1H1g02081 | - | LOC_Os01g39680 | Os01g0578700 | SAM, SaM+, SaM | Detail |
| C2H1g09591 | 1:19,965,452-19,968,345 | + | C1H1g21250 | CX1g005488 | LOC_Os01g39770 | Os01g0579600 | OsCBL9 | Detail |
| C2H1g01010 | 1:19,973,667-19,975,999 | + | C1H1g07602 | CX1g003267 | LOC_Os01g39780 | Os01g0579800 | - | Detail |
| C2H1g23706 | 1:19,976,922-19,980,018 | - | C1H1g16386 | CX1g002908 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| C2H1g07845 | 1:19,980,871-19,982,006 | + | C1H1g01467 | CX1g003139 | LOC_Os01g39790 | Os01g0579900 | - | Detail |
| C2H1g09319 | 1:19,984,976-19,988,136 | - | C1H1g21549 | CX1g000391 | LOC_Os01g39800 | Os01g0580000 | - | Detail |
| C2H1g11799 | 1:19,989,590-19,995,302 | + | C1H1g25713 | CX1g006764 | LOC_Os01g39810 | Os01g0580100 | - | Detail |
| C2H1g14347 | 1:20,009,000-20,015,009 | + | C1H1g21126 | CX1g007091 | LOC_Os01g39830 | Os01g0580200 | - | Detail |
| C2H1g28048 | 1:20,014,913-20,016,892 | - | - | CX1g004854 | LOC_Os01g39840 | Os01g0580300 | - | Detail |
| C2H1g10202 | 1:20,037,484-20,038,729 | + | C1H1g08752 | CX1g001278 | LOC_Os01g39860 | Os01g0580500 | ACO7, OsACO7 | Detail |
| C2H1g22352 | 1:20,045,704-20,051,087 | - | C1H1g22394 | CX1g003562 | LOC_Os01g39890 | Os01g0580800 | - | Detail |
| C2H1g01027 | 1:20,070,536-20,074,539 | + | C1H1g15496 | CX1g003223 | LOC_Os01g39960 | Os01g0581300 | OsLCYe | Detail |
| C2H1g16645 | 1:20,075,082-20,077,784 | + | C1H1g29026 | CX1g001920 | LOC_Os01g39970 | Os01g0581400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |