| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g08216 | 9:9,439,248-9,439,987 | - | C2H9g30412 | CX9g057843 | LOC_Os09g18360 | Os09g0353200 | - | Detail |
| C1H9g09295 | 9:9,440,836-9,441,919 | - | C2H9g30412 | CX9g057843 | LOC_Os09g18360 | Os09g0353200 | - | Detail |
| C1H9g04955 | 9:9,454,547-9,456,631 | + | C2H9g08214 | CX9g055425 | LOC_Os09g18390 | Os09g0353400 | - | Detail |
| C1H9g29305 | 9:9,467,542-9,467,763 | + | C2H9g27520 | CX9g055425 | LOC_Os09g18520 | Os09g0354300 | - | Detail |
| C1H9g07758 | 9:9,475,327-9,476,052 | + | C2H9g11760 | CX9g055968 | LOC_Os09g18450 | Os09g0353700 | - | Detail |
| C1H9g19178 | 9:9,479,448-9,481,196 | + | C2H9g08714 | CX9g055968 | LOC_Os09g18450 | Os09g0354100 | - | Detail |
| C1H9g30762 | 9:9,486,955-9,488,698 | - | C2H9g08214 | CX9g055425 | LOC_Os09g18520 | Os09g0354300 | - | Detail |
| C1H9g24256 | 9:9,498,867-9,501,779 | - | C2H9g09770 | CX9g056896 | LOC_Os09g18530 | Os09g0355400 | - | Detail |
| C1H9g24532 | 9:9,502,391-9,502,837 | - | C2H9g15417 | CX9g055165 | LOC_Os09g18540 | Os09g0349600 | - | Detail |
| C1H9g06855 | 9:9,508,255-9,509,735 | - | C2H9g16060 | CX9g055165 | LOC_Os09g18620 | Os09g0356200 | - | Detail |
| C1H9g22899 | 9:9,551,698-9,554,089 | + | C2H9g15103 | CX9g057944 | LOC_Os09g19400 | Os09g0358700 | OsCBM1, OsMRLP15 | Detail |
| C1H9g12366 | 9:9,556,269-9,558,506 | + | C2H9g27713 | CX9g057944 | LOC_Os09g19350 | Os09g0358000 | - | Detail |
| C1H9g27368 | 9:9,564,634-9,574,634 | + | C2H9g01105 | CX3g029985 | - | - | - | Detail |
| C1H9g19813 | 9:9,574,717-9,576,498 | + | C2H9g01105 | - | - | - | - | Detail |
| C1H9g15807 | 9:9,606,819-9,610,207 | + | C2H9g12232 | CX9g055760 | LOC_Os09g18594 | Os09g0356200 | - | Detail |
| C1H9g10170 | 9:9,636,050-9,644,685 | + | C2H9g04161 | CX9g057284 | LOC_Os09g18594 | Os09g0356200 | - | Detail |
| C1H9g09829 | 9:9,636,581-9,645,430 | - | - | - | - | - | - | Detail |
| C1H9g21628 | 9:9,654,581-9,660,202 | + | C2H9g24070 | CX9g057284 | LOC_Os09g18594 | Os09g0355400 | - | Detail |
| C1H9g09637 | 9:9,672,320-9,675,940 | - | C2H9g00341 | CX9g057245 | LOC_Os09g19280 | Os09g0357400 | - | Detail |
| C1H9g20757 | 9:9,694,729-9,696,882 | - | C2H9g00341 | CX9g057245 | LOC_Os09g19330 | Os09g0357400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g00153 | 7:1,930,476-1,933,199 | - | C1H7g31696 | CX7g049707 | LOC_Os07g04860 | Os07g0141450 | - | Detail |
| C2H7g16296 | 7:1,935,725-1,940,063 | + | C1H7g09323 | CX7g046101 | LOC_Os07g04850 | Os07g0141600 | - | Detail |
| C2H7g21156 | 7:1,940,461-1,944,748 | - | C1H7g23727 | CX7g046767 | LOC_Os07g09940 | Os07g0141700 | - | Detail |
| C2H7g11404 | 7:1,962,002-1,963,119 | + | C1H7g18918 | CX7g046239 | LOC_Os07g04910 | Os07g0142000 | - | Detail |
| C2H7g00732 | 7:1,966,086-1,966,226 | + | - | - | - | Os07g0142100 | OsIMA2 | Detail |
| C2H7g05991 | 7:1,967,709-1,968,206 | + | C1H7g24090 | CX7g046276 | LOC_Os07g04930 | Os07g0142200 | - | Detail |
| C2H7g04010 | 7:1,972,676-1,973,182 | + | C1H7g05719 | CX7g048543 | LOC_Os07g04950 | Os07g0142500 | - | Detail |
| C2H7g10792 | 7:1,980,426-1,980,860 | + | C1H7g05719 | CX7g048364 | LOC_Os07g04960 | Os07g0142600 | - | Detail |
| C2H7g14480 | 7:1,984,207-1,985,655 | - | C1H7g16311 | CX7g049302 | LOC_Os07g04970 | Os07g0142700 | - | Detail |
| C2H7g21727 | 7:1,991,575-1,994,468 | + | C1H7g23399 | CX7g046865 | LOC_Os07g05000 | Os07g0142900 | - | Detail |
| C2H7g27275 | 7:1,997,329-2,001,005 | + | C1H7g28462 | CX7g048357 | LOC_Os07g05000 | Os07g0143000 | - | Detail |
| C2H7g14513 | 7:2,006,726-2,008,468 | + | C1H7g12552 | CX7g048872 | LOC_Os07g05010 | Os07g0143200 | OsPIF14, OsPIF14β, OsPIF14b, PIL14 | Detail |
| C2H7g20668 | 7:2,017,719-2,020,215 | - | C1H7g09908 | CX7g046854 | - | - | - | Detail |
| C2H7g24721 | 7:2,020,489-2,023,994 | - | C1H7g25943 | CX7g048569 | LOC_Os07g05040 | Os07g0143600 | - | Detail |
| C2H7g00608 | 7:2,024,719-2,030,133 | - | C1H7g01640 | CX7g048216 | LOC_Os07g05050 | Os07g0143700 | OsRH53 | Detail |
| C2H7g04210 | 7:2,039,725-2,041,583 | + | C1H7g10624 | CX7g049966 | LOC_Os07g05110 | Os07g0144500 | - | Detail |
| C2H7g16275 | 7:2,041,986-2,043,862 | - | C1H7g23348 | CX7g049847 | LOC_Os07g05120 | - | - | Detail |
| C2H7g17564 | 7:2,044,616-2,049,320 | - | C1H7g28674 | - | - | - | - | Detail |
| C2H7g12809 | 7:2,051,120-2,051,597 | + | C1H7g03354 | - | - | Os07g0144732 | - | Detail |
| C2H7g08843 | 7:2,058,814-2,059,338 | + | C1H7g09042 | CX7g046504 | LOC_Os07g05160 | Os07g0144900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |