| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g16089 | 1:30,170,686-30,173,376 | + | C2H1g08239 | CX1g003150 | LOC_Os01g58530 | Os01g0799100 | - | Detail |
| C1H1g12245 | 1:30,184,803-30,187,571 | + | C2H1g18359 | CX1g005130 | LOC_Os01g58550 | Os01g0799500 | - | Detail |
| C1H1g29611 | 1:30,192,738-30,195,542 | + | C2H1g18714 | CX1g005215 | LOC_Os01g58580 | Os01g0799900 | OsMC6 | Detail |
| C1H1g12745 | 1:30,198,941-30,199,150 | - | C2H1g09595 | CX1g002563 | LOC_Os01g58600 | Os01g0800101 | - | Detail |
| C1H1g13802 | 1:30,204,082-30,206,796 | + | C2H1g03442 | CX1g007223 | LOC_Os01g58610 | Os01g0800266 | - | Detail |
| C1H1g17566 | 1:30,210,760-30,211,749 | - | - | CX1g000512 | LOC_Os01g58620 | Os01g0800300 | - | Detail |
| C1H1g01785 | 1:30,212,996-30,214,318 | + | C2H1g29005 | CX1g001613 | LOC_Os01g58630 | Os01g0800400 | - | Detail |
| C1H1g08940 | 1:30,219,116-30,223,609 | + | C2H1g29094 | CX1g003815 | LOC_Os01g58640 | Os01g0800500 | - | Detail |
| C1H1g30861 | 1:30,225,226-30,225,573 | + | C2H1g27606 | CX1g006207 | LOC_Os01g58650 | Os01g0800600 | - | Detail |
| C1H1g30117 | 1:30,228,653-30,231,929 | + | C2H1g21131 | CX1g006207 | LOC_Os01g58660 | Os01g0800800 | - | Detail |
| C1H1g26760 | 1:30,232,139-30,232,796 | + | C2H1g18712 | CX1g006207 | LOC_Os01g58670 | Os01g0800900 | - | Detail |
| C1H1g09904 | 1:30,235,842-30,236,708 | + | C2H1g01554 | CX1g004061 | LOC_Os01g58670 | Os01g0800900 | - | Detail |
| C1H1g08092 | 1:30,237,884-30,245,952 | + | C2H1g30505 | CX1g001454 | LOC_Os01g58680 | Os01g0801100 | - | Detail |
| C1H1g00385 | 1:30,246,919-30,249,289 | - | C2H1g23744 | CX1g006739 | LOC_Os01g58700 | Os01g0801200 | - | Detail |
| C1H1g22197 | 1:30,252,120-30,253,502 | + | - | - | - | - | - | Detail |
| C1H1g19538 | 1:30,258,022-30,259,978 | - | C2H1g07939 | CX1g005593 | LOC_Os01g58730 | Os01g0801500 | - | Detail |
| C1H1g05474 | 1:30,260,617-30,264,155 | - | C2H1g30108 | CX1g003950 | LOC_Os01g58740 | Os01g0801600 | - | Detail |
| C1H1g14045 | 1:30,264,940-30,268,494 | - | C2H1g26051 | CX1g005695 | LOC_Os01g58750 | Os01g0801700 | OsGCD1 | Detail |
| C1H1g02432 | 1:30,271,007-30,271,498 | + | C2H5g23523 | CX1g003384 | LOC_Os01g58760 | Os01g0801901 | - | Detail |
| C1H1g04999 | 1:30,276,962-30,277,951 | + | C2H1g06104 | CX1g006547 | LOC_Os01g58780 | Os01g0802000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g05410 | 3:2,813,014-2,821,309 | + | C1H3g11682 | CX3g027922 | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| C2H3g11481 | 3:2,821,809-2,827,231 | - | C1H3g12948 | CX3g029615 | LOC_Os03g06520 | Os03g0161200 | - | Detail |
| C2H3g04338 | 3:2,839,593-2,841,892 | + | C1H3g19950 | CX3g031150 | LOC_Os03g06570 | Os03g0161400 | - | Detail |
| C2H3g04897 | 3:2,849,650-2,852,046 | + | C1H3g16884 | CX3g029485 | LOC_Os03g06580 | Os03g0161500 | - | Detail |
| C2H3g20671 | 3:2,857,405-2,857,866 | - | C1H3g31680 | CX3g029738 | LOC_Os03g06610 | Os03g0161600 | OsEPFL6 | Detail |
| C2H3g16543 | 3:2,873,484-2,875,711 | + | C1H3g19723 | CX3g029835 | LOC_Os03g06620 | Os03g0161800 | - | Detail |
| C2H3g18983 | 3:2,877,424-2,879,447 | + | C1H3g17239 | CX3g029527 | LOC_Os03g06630 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |
| C2H3g18594 | 3:2,887,211-2,888,499 | + | - | - | - | - | - | Detail |
| C2H3g18217 | 3:2,889,436-2,891,957 | + | C1H3g19807 | CX3g030288 | LOC_Os03g06654 | Os03g0162000 | COW1, OsCOW1, oscow1, OsYUC8, NAL7, OsYUCCA8, FMO, OsFMO(t) | Detail |
| C2H3g01853 | 3:2,903,303-2,903,873 | + | C1H3g07386 | CX3g030521 | LOC_Os03g06670 | Os03g0162200 | - | Detail |
| C2H3g21314 | 3:2,911,394-2,912,892 | + | C1H3g24759 | CX3g025819 | LOC_Os03g06680 | Os03g0162500 | OsDUF50604 | Detail |
| C2H3g14410 | 3:2,930,448-2,934,898 | + | C1H3g16348 | CX3g029826 | LOC_Os03g06705 | Os03g0162800 | - | Detail |
| C2H3g28634 | 3:2,935,603-2,936,034 | + | C1H3g31273 | - | - | - | - | Detail |
| C2H3g14053 | 3:2,936,052-2,938,523 | + | C1H3g16422 | CX3g027686 | LOC_Os03g06710 | Os03g0162900 | - | Detail |
| C2H3g03063 | 3:2,941,941-2,943,677 | + | C1H3g04672 | - | - | Os03g0163000 | - | Detail |
| C2H3g15393 | 3:2,944,725-2,952,303 | + | C1H3g10390 | CX3g025042 | LOC_Os03g06720 | Os03g0163100 | - | Detail |
| C2H3g06714 | 3:2,952,491-2,953,976 | + | C1H3g23541 | CX3g025042 | LOC_Os03g06730 | Os03g0163200 | - | Detail |
| C2H3g22693 | 3:2,954,872-2,959,579 | + | C1H3g17347 | CX3g026090 | LOC_Os03g06740 | Os03g0163300 | - | Detail |
| C2H3g01887 | 3:2,960,166-2,961,935 | - | C1H3g06657 | CX3g029299 | LOC_Os03g06750 | Os03g0163400 | - | Detail |
| C2H3g29355 | 3:2,964,329-2,966,695 | + | C1H3g03297 | CX3g026455 | LOC_Os03g06760 | Os03g0163500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |