| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g17495 | 9:7,831,579-7,835,572 | - | C2H9g30458 | CX9g057622 | LOC_Os09g15340 | Os09g0322200 | - | Detail |
| C1H9g01884 | 9:7,858,184-7,861,963 | + | C2H9g04080 | CX9g056827 | - | Os09g0322800 | - | Detail |
| C1H9g15325 | 9:7,861,772-7,865,027 | - | C2H9g09843 | - | LOC_Os09g15389 | Os09g0322600 | - | Detail |
| C1H9g18958 | 9:7,872,723-7,873,406 | + | C2H9g19668 | - | LOC_Os09g15400 | Os09g0322900 | - | Detail |
| C1H9g08682 | 9:7,875,721-7,876,955 | + | C2H9g24834 | - | - | - | - | Detail |
| C1H9g20226 | 9:7,878,750-7,883,217 | - | C2H9g07070 | CX9g056147 | LOC_Os09g15420 | Os09g0323000 | - | Detail |
| C1H9g02706 | 9:7,885,742-7,890,600 | - | C2H9g03393 | CX9g057852 | LOC_Os09g15430 | Os09g0323100 | - | Detail |
| C1H9g26925 | 9:7,899,876-7,901,242 | - | C2H12g07326 | CX12g015891 | - | - | - | Detail |
| C1H9g02609 | 9:7,909,719-7,911,776 | - | C2H9g13352 | CX9g057364 | LOC_Os09g15480 | Os09g0323500 | - | Detail |
| C1H9g26563 | 9:7,918,709-7,919,780 | + | C2H9g24164 | CX9g057171 | LOC_Os09g15500 | Os09g0323700 | - | Detail |
| C1H9g31373 | 9:7,963,702-7,964,074 | - | C2H9g09634 | - | - | - | - | Detail |
| C1H9g01463 | 9:7,989,326-7,992,458 | - | C2H9g13951 | CX9g055191 | LOC_Os09g15700 | Os09g0326100 | - | Detail |
| C1H9g24231 | 9:8,014,691-8,023,138 | + | C2H9g25380 | CX9g055311 | LOC_Os09g15750 | Os09g0326800 | OsRpn1a | Detail |
| C1H9g17537 | 9:8,024,098-8,026,264 | + | C2H9g24003 | - | LOC_Os09g15760 | Os09g0326850 | - | Detail |
| C1H9g09285 | 9:8,028,766-8,032,447 | + | C2H9g24688 | CX9g055228 | LOC_Os09g15775 | Os09g0326900 | - | Detail |
| C1H9g31109 | 9:8,035,896-8,036,785 | + | C2H9g08878 | CX9g055621 | LOC_Os09g15780 | Os09g0327000 | - | Detail |
| C1H9g27205 | 9:8,038,363-8,040,051 | - | C2H9g09631 | CX9g057160 | LOC_Os09g15790 | Os09g0327100 | - | Detail |
| C1H9g14037 | 9:8,042,345-8,044,967 | - | C2H9g12558 | CX9g056557 | LOC_Os09g15800 | Os09g0327200 | - | Detail |
| C1H9g27818 | 9:8,047,045-8,049,810 | + | C2H9g21061 | CX9g057213 | LOC_Os09g15810 | Os09g0327300 | - | Detail |
| C1H9g29316 | 9:8,050,331-8,053,910 | - | C2H9g12353 | CX9g054848 | LOC_Os09g15820 | Os09g0327400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g19013 | 4:17,293,022-17,293,321 | + | C1H4g13967 | CX4g035834 | LOC_Os04g33560 | Os04g0411200 | - | Detail |
| C2H4g14818 | 4:17,296,776-17,297,201 | + | C1H4g02095 | CX4g035203 | - | - | - | Detail |
| C2H4g06840 | 4:17,306,701-17,308,226 | - | C1H4g06511 | CX4g034096 | LOC_Os04g33570 | Os04g0411400 | RCN4 | Detail |
| C2H4g13082 | 4:17,316,644-17,317,192 | + | C1H4g03675 | - | LOC_Os04g33580 | - | - | Detail |
| C2H4g18183 | 4:17,333,834-17,339,321 | + | C1H4g04480 | CX4g034692 | LOC_Os04g33590 | Os04g0411800 | - | Detail |
| C2H4g17971 | 4:17,341,591-17,346,361 | + | C1H4g04480 | CX4g035360 | LOC_Os04g33600 | Os04g0412000 | - | Detail |
| C2H4g01788 | 4:17,353,943-17,354,566 | + | C1H4g02994 | CX4g035334 | LOC_Os04g33610 | Os04g0412100 | OsBIC1 | Detail |
| C2H4g00589 | 4:17,361,858-17,362,316 | + | C1H4g08221 | CX4g033895 | LOC_Os04g33630 | Os04g0412200 | - | Detail |
| C2H4g24079 | 4:17,367,073-17,382,578 | + | C1H4g08556 | CX4g035419 | LOC_Os04g33660 | Os04g0412500 | - | Detail |
| C2H4g20884 | 4:17,389,543-17,390,328 | + | - | CX2g021594 | LOC_Os04g33670 | Os04g0412700 | - | Detail |
| C2H4g11928 | 4:17,391,230-17,392,576 | + | - | CX4g034454 | LOC_Os04g33680 | Os04g0412800 | - | Detail |
| C2H4g27573 | 4:17,393,756-17,404,376 | + | C1H4g15980 | CX4g035285 | LOC_Os04g33690 | Os04g0412900 | - | Detail |
| C2H4g17905 | 4:17,404,580-17,408,996 | - | C1H4g11558 | CX4g032656 | LOC_Os04g33700 | Os04g0413000 | - | Detail |
| C2H4g06805 | 4:17,411,768-17,414,162 | + | C1H4g31098 | CX4g033899 | LOC_Os04g33720 | Os04g0413200 | OsCIN3 | Detail |
| C2H4g13973 | 4:17,418,965-17,424,157 | + | C1H4g06839 | CX4g035303 | LOC_Os04g33740 | Os04g0413500 | GIF1, gif1, CIN2, OsCIN2, OsGIF1, WB1 | Detail |
| C2H4g25683 | 4:17,446,668-17,450,629 | + | C1H4g19252 | CX4g031791 | LOC_Os04g33770 | Os04g0414000 | - | Detail |
| C2H4g24793 | 4:17,453,525-17,458,645 | + | C1H4g03882 | CX4g033946 | LOC_Os04g33780 | Os04g0414100 | - | Detail |
| C2H4g26864 | 4:17,465,526-17,466,491 | + | C1H4g02836 | CX4g034105 | LOC_Os04g33810 | Os04g0414300 | - | Detail |
| C2H4g04832 | 4:17,475,265-17,477,957 | + | C1H4g11612 | CX4g031478 | LOC_Os04g33830 | Os04g0414700 | - | Detail |
| C2H4g14107 | 4:17,489,153-17,489,745 | - | C1H4g11357 | CX4g032373 | - | - | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |