| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g09555 | 9:7,355,772-7,359,623 | + | C2H9g27130 | CX9g057970 | LOC_Os09g13820 | Os09g0313500 | - | Detail |
| C1H9g02405 | 9:7,371,650-7,377,767 | - | C2H9g07921 | CX9g055840 | LOC_Os09g13870 | Os09g0308900 | - | Detail |
| C1H9g25283 | 9:7,382,023-7,386,069 | - | C2H9g11915 | CX9g057115 | LOC_Os09g13880 | Os09g0309100 | - | Detail |
| C1H9g15536 | 9:7,393,313-7,395,983 | + | C2H9g19419 | CX9g055203 | LOC_Os09g13890 | Os09g0309200 | - | Detail |
| C1H9g13827 | 9:7,413,086-7,413,583 | + | C2H9g00565 | CX9g055359 | LOC_Os09g13930 | Os09g0309600 | - | Detail |
| C1H9g19686 | 9:7,414,402-7,416,562 | - | C2H9g16942 | CX9g056972 | LOC_Os09g13940 | Os09g0309700 | ERF109, OsERF109 | Detail |
| C1H9g06144 | 9:7,429,655-7,433,249 | + | C2H9g21549 | CX9g057298 | LOC_Os09g14490 | Os09g0314200 | - | Detail |
| C1H9g13049 | 9:7,444,096-7,447,292 | + | C2H9g15651 | CX9g057011 | LOC_Os09g14510 | Os09g0314300 | - | Detail |
| C1H9g23150 | 9:7,448,541-7,450,683 | - | C2H9g09446 | CX9g057252 | LOC_Os09g14520 | Os09g0314333 | - | Detail |
| C1H9g06365 | 9:7,456,364-7,462,513 | - | C2H9g00957 | CX9g054936 | LOC_Os09g14540 | Os09g0314400 | - | Detail |
| C1H9g30622 | 9:7,462,526-7,463,243 | - | - | - | - | Os09g0314400 | - | Detail |
| C1H9g21120 | 9:7,467,029-7,471,822 | + | C2H9g06318 | CX9g056489 | LOC_Os09g14550 | Os09g0314500 | - | Detail |
| C1H9g01176 | 9:7,517,016-7,522,243 | - | C2H9g11211 | CX9g056790 | LOC_Os09g14670 | Os09g0315700 | Osppc2b | Detail |
| C1H9g30398 | 9:7,534,318-7,542,711 | - | C2H9g14672 | CX9g056777 | LOC_Os09g14680 | Os09g0315800 | - | Detail |
| C1H9g11301 | 9:7,544,976-7,546,848 | - | C2H9g09416 | CX9g057920 | LOC_Os09g14700 | Os09g0316000 | - | Detail |
| C1H9g11190 | 9:7,649,985-7,651,651 | - | C2H9g02619 | CX9g056119 | LOC_Os09g14960 | Os09g0318600 | - | Detail |
| C1H9g25157 | 9:7,710,855-7,715,870 | + | C2H9g29207 | CX9g057860 | LOC_Os09g15170 | Os09g0320400 | - | Detail |
| C1H9g15295 | 9:7,722,503-7,731,326 | - | C2H9g07412 | CX9g056809 | LOC_Os09g15240 | Os09g0321200 | OsZAS | Detail |
| C1H9g17814 | 9:7,805,088-7,809,068 | + | C2H9g13873 | CX9g057985 | LOC_Os09g15320 | Os09g0321900 | - | Detail |
| C1H9g27408 | 9:7,812,360-7,815,936 | - | C2H9g04429 | CX9g058144 | LOC_Os09g15330 | Os09g0322000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g20992 | 6:20,786,978-20,788,881 | + | C1H6g05226 | CX6g044623 | LOC_Os06g39906 | Os06g0601000 | - | Detail |
| C2H6g28120 | 6:20,804,013-20,806,774 | + | C1H6g03363 | CX6g042659 | LOC_Os06g39960 | Os06g0601500 | OsbZIP48, OsHY5L2 | Detail |
| C2H6g17237 | 6:20,807,903-20,811,157 | + | C1H6g30468 | CX6g042583 | LOC_Os06g39970 | Os06g0601600 | OsCESA11 | Detail |
| C2H6g29039 | 6:20,821,571-20,826,537 | + | C1H6g18591 | CX6g044674 | LOC_Os06g40020 | Os06g0602400 | OsRH52A | Detail |
| C2H6g11572 | 6:20,841,490-20,843,038 | + | C1H6g01432 | CX6g045252 | LOC_Os06g40040 | Os06g0602600 | - | Detail |
| C2H6g05068 | 6:20,843,594-20,847,246 | - | C1H6g22569 | CX6g041818 | LOC_Os06g40050 | Os06g0602700 | BT1-3, OsBT1-3 | Detail |
| C2H6g14435 | 6:20,862,399-20,866,430 | + | C1H6g14736 | CX6g042177 | LOC_Os06g40060 | Os06g0602800 | - | Detail |
| C2H6g04094 | 6:20,867,690-20,870,961 | - | C1H6g19546 | CX6g041181 | LOC_Os06g40070 | Os06g0602900 | - | Detail |
| C2H6g04563 | 6:20,873,487-20,876,999 | - | C1H6g00043 | CX6g043114 | LOC_Os06g40080 | Os06g0603000 | SE5, Se5, OsHO1, OsHO-1, OsHY1, HO-1, HO1, OsSE5, PE-1, grc1 | Detail |
| C2H6g18680 | 6:20,895,801-20,899,841 | - | C1H6g11187 | CX6g043946 | LOC_Os06g40120 | Os06g0603600 | OsSPX1 | Detail |
| C2H6g21981 | 6:20,916,404-20,917,475 | - | C1H6g05477 | CX6g044688 | LOC_Os06g40150 | Os06g0604000 | OsWR2 | Detail |
| C2H6g11228 | 6:20,925,550-20,928,685 | - | C1H6g20423 | CX6g045934 | LOC_Os06g40170 | Os06g0604200 | OsPLDα4, OsPLDa4, OsPLDalpha4, PLDalpha4 | Detail |
| C2H6g10259 | 6:20,936,778-20,938,125 | + | - | - | - | - | - | Detail |
| C2H6g26456 | 6:20,939,165-20,942,144 | + | C1H6g10180 | CX6g045594 | LOC_Os06g40180 | Os06g0604300 | OsPLDα5, OsPLDa5, OsPLDalpha5, PLDalpha5 | Detail |
| C2H6g06437 | 6:20,946,189-20,949,815 | + | C1H6g27795 | CX6g041305 | LOC_Os06g40190 | Os06g0604400 | OsPLDα3 | Detail |
| C2H6g13702 | 6:20,952,820-20,956,957 | + | C1H6g25357 | CX6g042132 | LOC_Os06g40200 | Os06g0604500 | - | Detail |
| C2H6g02651 | 6:20,967,982-20,968,696 | + | C1H6g04884 | CX6g044895 | LOC_Os06g40210 | Os06g0604600 | - | Detail |
| C2H6g13160 | 6:20,976,308-20,977,652 | - | C1H6g20614 | CX6g045437 | LOC_Os06g40220 | - | - | Detail |
| C2H6g05081 | 6:20,988,280-20,988,522 | + | C1H6g13328 | CX6g045873 | LOC_Os06g40320 | - | - | Detail |
| C2H6g19267 | 6:21,013,433-21,015,541 | - | C1H6g27028 | CX6g045451 | LOC_Os06g40330 | Os06g0605600 | OsGAMYBL1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |