| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g22275 | 9:6,438,106-6,439,258 | + | C2H9g07479 | CX9g057641 | - | Os09g0482840 | - | Detail |
| C1H9g04248 | 9:6,441,717-6,443,186 | + | C2H9g28255 | CX9g057610 | LOC_Os09g12530 | Os09g0296700 | - | Detail |
| C1H9g29624 | 9:6,441,963-6,442,966 | - | - | - | - | - | - | Detail |
| C1H9g21187 | 9:6,448,403-6,451,198 | + | C2H9g16228 | CX9g056490 | LOC_Os09g12540 | Os09g0296800 | OsLhcb7 | Detail |
| C1H9g06139 | 9:6,452,735-6,459,478 | + | C2H9g17110 | CX9g056084 | LOC_Os09g12550 | Os09g0296900 | HSLG2 | Detail |
| C1H9g10693 | 9:6,460,693-6,467,606 | + | C2H9g04106 | CX9g058097 | LOC_Os09g12560 | Os09g0297000 | FC1 | Detail |
| C1H9g27717 | 9:6,468,043-6,471,246 | - | C2H9g24691 | CX9g054933 | LOC_Os09g12570 | Os09g0297100 | - | Detail |
| C1H9g22827 | 9:6,479,465-6,482,765 | - | C2H9g07019 | CX9g058188 | LOC_Os09g12600 | Os09g0297400 | PPT1, OsPPT1 | Detail |
| C1H9g17081 | 9:6,485,287-6,485,873 | - | C2H9g10281 | CX9g054945 | LOC_Os09g12620 | Os09g0297800 | - | Detail |
| C1H9g28667 | 9:6,486,820-6,487,512 | - | C2H9g19494 | CX9g057472 | LOC_Os09g12630 | Os09g0297900 | - | Detail |
| C1H9g31684 | 9:6,490,842-6,495,431 | + | C2H9g30271 | CX9g056555 | LOC_Os09g12650 | Os09g0298100 | OsPFP1α4 | Detail |
| C1H9g00979 | 9:6,496,155-6,500,706 | - | C2H9g02028 | CX9g057527 | LOC_Os09g12660 | Os09g0298200 | - | Detail |
| C1H9g04278 | 9:6,506,799-6,511,865 | + | C2H9g04760 | CX9g056017 | LOC_Os09g12710 | Os09g0298400 | - | Detail |
| C1H9g29739 | 9:6,513,132-6,518,148 | - | C2H9g25888 | CX9g056522 | LOC_Os09g12720 | Os09g0298500 | - | Detail |
| C1H9g12166 | 9:6,528,716-6,535,957 | - | C2H9g07648 | CX9g057949 | LOC_Os09g12730 | Os09g0298700 | OsRRM | Detail |
| C1H9g29394 | 9:6,550,089-6,552,860 | + | C2H9g25106 | CX9g057083 | LOC_Os09g12750 | Os09g0299000 | OsPHL3 | Detail |
| C1H9g12987 | 9:6,559,922-6,561,970 | + | C2H9g10023 | CX9g057083 | LOC_Os09g12770 | Os09g0299200 | OsMYBc, MYBc | Detail |
| C1H9g12401 | 9:6,571,220-6,574,455 | + | C2H9g22093 | CX9g058183 | LOC_Os09g12780 | Os09g0299300 | - | Detail |
| C1H9g11121 | 9:6,575,537-6,579,655 | - | C2H9g17440 | CX9g056426 | LOC_Os09g12790 | Os09g0299400 | - | Detail |
| C1H9g03619 | 9:6,585,361-6,589,526 | - | C2H9g04412 | CX9g056639 | LOC_Os09g12800 | Os09g0299500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g10310 | 3:10,894,128-10,896,740 | + | C1H3g27306 | CX3g030007 | LOC_Os03g21450 | Os03g0130800 | - | Detail |
| C2H3g17481 | 3:10,896,805-10,900,686 | - | C1H3g15898 | CX3g028069 | LOC_Os03g21460 | Os03g0332400 | GLYII-2, OsGLYII2, GLYII2, OsGLYII-2 | Detail |
| C2H3g22879 | 3:10,904,923-10,906,403 | - | C1H3g21366 | CX3g029311 | LOC_Os11g11390 | Os03g0332500 | - | Detail |
| C2H3g01804 | 3:10,908,596-10,910,611 | - | C1H3g21148 | CX3g027147 | LOC_Os03g21480 | Os03g0332533 | - | Detail |
| C2H3g10583 | 3:10,913,454-10,917,924 | - | C1H3g11764 | CX3g025440 | LOC_Os03g21490 | Os03g0332700 | - | Detail |
| C2H3g24190 | 3:10,924,413-10,929,402 | + | C1H3g02450 | CX3g027316 | LOC_Os03g21510 | Os03g0332900 | - | Detail |
| C2H3g30311 | 3:10,929,734-10,935,090 | - | C1H3g13994 | CX3g028180 | LOC_Os03g21520 | Os03g0333000 | - | Detail |
| C2H3g26938 | 3:10,935,271-10,945,526 | + | C1H3g12459 | CX3g029941 | LOC_Os03g21530 | Os03g0333100 | - | Detail |
| C2H3g19269 | 3:10,946,787-10,949,471 | + | C1H3g29664 | CX3g028103 | LOC_Os03g21540 | Os03g0333200 | DRUS1, OsCrRLK1L8, CrRLK1L8, FLR1 | Detail |
| C2H3g24047 | 3:10,953,705-10,958,206 | + | C1H3g30788 | CX3g028855 | LOC_Os03g21550 | Os03g0333300 | - | Detail |
| C2H3g24886 | 3:10,958,751-10,959,254 | + | C1H3g06087 | CX3g028002 | LOC_Os03g21560 | Os03g0333400 | - | Detail |
| C2H3g01911 | 3:10,962,059-10,966,029 | - | C1H3g12764 | CX3g030167 | LOC_Os03g21620 | Os03g0333500 | - | Detail |
| C2H3g06072 | 3:10,971,787-10,975,855 | + | C1H3g24732 | CX3g030080 | LOC_Os03g21630 | Os03g0334100 | - | Detail |
| C2H3g19486 | 3:10,977,888-10,981,311 | + | C1H3g12242 | CX3g025988 | LOC_Os03g21640 | Os03g0334200 | - | Detail |
| C2H3g01471 | 3:10,981,968-10,982,447 | - | C1H3g12872 | CX3g025425 | LOC_Os03g21650 | Os03g0334300 | - | Detail |
| C2H3g23114 | 3:10,988,613-10,995,631 | + | C1H3g04089 | CX3g028192 | LOC_Os03g21680 | Os03g0334700 | - | Detail |
| C2H3g29675 | 3:10,995,715-11,000,869 | - | C1H3g19863 | CX3g026146 | LOC_Os03g21690 | Os03g0334800 | - | Detail |
| C2H3g22866 | 3:11,003,512-11,004,783 | + | C1H3g05344 | CX3g026406 | LOC_Os03g21700 | Os03g0335100 | - | Detail |
| C2H3g03886 | 3:11,009,746-11,011,541 | + | C1H3g04080 | CX3g025256 | LOC_Os03g21710 | Os03g0335200 | - | Detail |
| C2H3g08004 | 3:11,015,360-11,015,605 | + | C1H3g16339 | CX3g030092 | - | Os07g0676800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |