| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g21283 | 9:5,766,290-5,768,186 | - | C2H9g27982 | CX9g057241 | LOC_Os09g11480 | Os09g0287000 | - | Detail |
| C1H9g23365 | 9:5,790,786-5,794,355 | - | C2H9g23717 | CX9g056284 | LOC_Os09g11510 | Os09g0287300 | - | Detail |
| C1H9g29832 | 9:5,794,915-5,797,123 | - | C2H9g22223 | CX9g057407 | LOC_Os09g11520 | Os09g0287500 | - | Detail |
| C1H9g15744 | 9:5,837,642-5,841,838 | + | C2H9g07373 | CX9g057052 | - | - | - | Detail |
| C1H9g03429 | 9:5,923,010-5,924,100 | - | C2H9g30434 | CX9g055733 | LOC_Os09g11420 | - | - | Detail |
| C1H9g22204 | 9:5,955,173-5,956,705 | - | C2H10g21400 | - | - | - | - | Detail |
| C1H9g11310 | 9:5,993,939-5,995,438 | - | C2H9g15538 | CX9g055383 | LOC_Os04g02280 | Os04g0113000 | - | Detail |
| C1H9g20260 | 9:5,996,866-5,997,899 | + | C2H9g28899 | CX9g057747 | LOC_Os09g12240 | Os09g0482640 | - | Detail |
| C1H9g01777 | 9:6,089,320-6,089,965 | + | - | - | - | - | - | Detail |
| C1H9g24844 | 9:6,196,024-6,197,199 | + | C2H9g13431 | CX9g057538 | LOC_Os09g12150 | Os09g0292900 | IBF1 | Detail |
| C1H9g14927 | 9:6,232,357-6,232,962 | - | C2H1g21612 | CX1g001472 | LOC_Os06g28030 | Os06g0474600 | - | Detail |
| C1H9g05988 | 9:6,282,748-6,284,278 | + | C2H9g05581 | CX9g055517 | LOC_Os09g12230 | Os09g0293400 | OsUBC18 | Detail |
| C1H9g27936 | 9:6,288,904-6,292,548 | - | C2H9g02868 | CX9g055853 | LOC_Os09g12240 | Os09g0293500 | BRL1, OsBRL1 | Detail |
| C1H9g24677 | 9:6,318,417-6,322,024 | + | C2H9g17153 | CX9g056913 | LOC_Os09g12270 | Os09g0293900 | - | Detail |
| C1H9g08096 | 9:6,322,582-6,333,476 | - | C2H9g16706 | CX9g055290 | LOC_Os09g12290 | Os09g0294000 | - | Detail |
| C1H9g11895 | 9:6,353,974-6,357,055 | - | C2H9g19323 | CX9g056129 | LOC_Os09g12310 | Os09g0294300 | - | Detail |
| C1H9g15369 | 9:6,382,529-6,384,073 | + | C2H9g29911 | CX9g056635 | LOC_Os09g12350 | Os09g0328600 | - | Detail |
| C1H9g24676 | 9:6,392,931-6,393,152 | - | C2H9g22784 | - | LOC_Os09g11970 | - | - | Detail |
| C1H9g14814 | 9:6,394,482-6,403,273 | - | C2H9g22964 | CX9g056963 | LOC_Os09g12480 | Os09g0328600 | - | Detail |
| C1H9g09868 | 9:6,430,096-6,434,686 | + | C2H9g17607 | CX9g055369 | LOC_Os09g12500 | Os09g0296400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g23023 | 12:16,844,722-16,846,654 | + | C1H12g07006 | CX12g017638 | LOC_Os12g32620 | Os12g0510900 | - | Detail |
| C2H12g01778 | 12:16,849,512-16,852,172 | - | C1H12g03851 | CX12g016065 | LOC_Os12g32630 | Os12g0511000 | - | Detail |
| C2H12g29019 | 12:16,857,902-16,861,024 | + | C1H12g10988 | CX12g017408 | LOC_Os12g32640 | Os12g0511200 | - | Detail |
| C2H12g27722 | 12:16,864,496-16,867,163 | + | C1H12g02725 | CX12g016554 | LOC_Os12g32650 | Os12g0511300 | - | Detail |
| C2H12g10634 | 12:16,868,389-16,874,203 | - | C1H12g25225 | CX12g015393 | LOC_Os12g32660 | Os12g0511400 | - | Detail |
| C2H12g22973 | 12:16,875,174-16,875,362 | + | C1H6g25666 | - | - | - | - | Detail |
| C2H12g27329 | 12:16,888,298-16,888,769 | + | - | - | - | - | - | Detail |
| C2H12g11130 | 12:16,900,311-16,907,890 | + | C1H12g02230 | CX12g015792 | LOC_Os12g32750 | Os12g0512000 | YUCCA5, OsYUCCA5, OsYUC5, YUC5 | Detail |
| C2H12g25999 | 12:16,909,770-16,913,007 | - | C1H12g03710 | CX12g018646 | LOC_Os12g32760 | Os12g0512100 | OsPLT14 | Detail |
| C2H12g03027 | 12:16,923,231-16,932,224 | - | C1H12g17769 | CX12g018223 | LOC_Os12g32820 | Os12g0512700 | OsABCG50, OsPDR23, OsABCG50/PDR23 | Detail |
| C2H12g05645 | 12:16,942,922-16,945,372 | - | C1H12g27986 | CX12g018790 | LOC_Os12g32850 | Os12g0512800 | - | Detail |
| C2H12g00633 | 12:16,970,353-16,972,425 | - | C1H12g26954 | CX12g016087 | LOC_Os12g32880 | Os12g0481000 | - | Detail |
| C2H12g11467 | 12:16,972,650-16,973,531 | - | C1H12g26954 | CX12g016087 | LOC_Os12g32880 | Os12g0481000 | - | Detail |
| C2H12g07164 | 12:17,001,212-17,002,585 | - | C1H12g26954 | CX12g018119 | LOC_Os12g32920 | Os12g0481000 | - | Detail |
| C2H12g09815 | 12:17,006,303-17,007,725 | - | C1H12g03418 | CX12g015793 | LOC_Os12g32930 | Os12g0513800 | - | Detail |
| C2H12g04487 | 12:17,008,233-17,010,395 | - | C1H12g27576 | CX12g018613 | LOC_Os12g32940 | Os12g0514000 | OsPLT15 | Detail |
| C2H12g14026 | 12:17,014,333-17,017,549 | - | C1H12g02478 | CX12g015332 | LOC_Os12g32950 | Os12g0514100 | - | Detail |
| C2H12g26822 | 12:17,022,203-17,022,805 | - | C1H12g29231 | CX12g016868 | LOC_Os12g32970 | Os12g0514300 | - | Detail |
| C2H12g20474 | 12:17,025,754-17,029,407 | - | C1H12g18347 | CX12g018673 | LOC_Os12g32980 | Os12g0514400 | SAB23 | Detail |
| C2H12g13347 | 12:17,031,309-17,037,504 | - | C1H12g11241 | CX12g017191 | LOC_Os12g32986 | Os12g0514500 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |