| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g25712 | 9:5,287,553-5,298,738 | + | C2H9g03130 | CX9g056789 | LOC_Os09g10840 | Os09g0280500 | - | Detail |
| C1H9g13805 | 9:5,304,655-5,309,889 | - | C2H9g29830 | CX9g056465 | LOC_Os09g10850 | Os09g0280600 | OsMFS1 | Detail |
| C1H9g06262 | 9:5,357,097-5,362,271 | - | C2H9g25342 | CX9g056244 | LOC_Os09g10910 | Os09g0281300 | - | Detail |
| C1H9g30004 | 9:5,371,528-5,375,272 | + | C2H9g00970 | CX9g054856 | LOC_Os09g10930 | Os09g0281600 | - | Detail |
| C1H9g25733 | 9:5,377,086-5,380,760 | + | C2H9g25828 | CX9g055566 | LOC_Os09g10940 | Os09g0281700 | - | Detail |
| C1H9g02726 | 9:5,386,239-5,389,989 | + | C2H9g04057 | CX9g056551 | LOC_Os09g10950 | Os09g0281800 | - | Detail |
| C1H9g26657 | 9:5,395,841-5,408,387 | - | C2H9g06979 | CX9g056165 | LOC_Os09g10960 | Os09g0281900 | - | Detail |
| C1H9g17778 | 9:5,421,009-5,421,449 | - | C2H9g30281 | CX9g055297 | LOC_Os09g10980 | Os09g0282100 | - | Detail |
| C1H9g16588 | 9:5,425,233-5,425,751 | - | C2H9g26900 | CX9g058190 | LOC_Os09g10980 | Os09g0282300 | - | Detail |
| C1H9g28469 | 9:5,578,317-5,580,520 | + | C2H9g23549 | CX9g056406 | LOC_Os09g11170 | Os09g0283600 | - | Detail |
| C1H9g00489 | 9:5,642,513-5,647,115 | + | C2H9g02512 | CX9g058079 | LOC_Os09g11230 | Os09g0284200 | - | Detail |
| C1H9g17976 | 9:5,649,153-5,651,722 | + | C2H9g29412 | CX9g056754 | LOC_Os09g11240 | Os09g0284300 | - | Detail |
| C1H9g18575 | 9:5,655,634-5,658,836 | - | C2H9g18317 | CX9g055562 | LOC_Os09g11250 | Os09g0284400 | - | Detail |
| C1H9g18907 | 9:5,661,294-5,670,564 | - | C2H9g18253 | CX9g055837 | LOC_Os09g11270 | Os09g0284600 | - | Detail |
| C1H9g15150 | 9:5,681,699-5,682,651 | - | C2H9g29161 | CX9g055039 | LOC_Os05g20980 | - | - | Detail |
| C1H9g19420 | 9:5,694,832-5,697,479 | - | C2H9g20861 | CX9g054971 | LOC_Os09g11440 | Os09g0286300 | - | Detail |
| C1H9g09221 | 9:5,699,202-5,708,642 | - | C2H9g08679 | CX9g057306 | LOC_Os09g11450 | Os09g0286400 | OsNHX5, GPA6 | Detail |
| C1H9g28241 | 9:5,709,151-5,709,496 | - | C2H9g16456 | - | - | Os09g0286501 | - | Detail |
| C1H9g07448 | 9:5,715,035-5,715,721 | - | C2H9g10409 | CX9g057392 | LOC_Os09g11460 | Os09g0286600 | - | Detail |
| C1H9g15004 | 9:5,732,303-5,733,499 | - | C2H9g16518 | CX9g055054 | LOC_Os09g11480 | Os09g0287000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g22839 | 4:19,950,887-19,951,792 | + | - | - | LOC_Os04g38920 | Os04g0463200 | - | Detail |
| C2H4g08523 | 4:19,953,814-19,955,643 | + | C1H4g05728 | CX4g036267 | LOC_Os04g38930 | Os04g0463300 | - | Detail |
| C2H4g23255 | 4:19,956,557-19,957,421 | - | C1H4g28377 | CX4g034571 | LOC_Os09g23300 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| C2H4g07912 | 4:19,958,148-19,958,925 | - | C1H4g31445 | CX4g034571 | LOC_Os04g38940 | Os04g0463400 | OsVIT1;2 OsVIT1 | Detail |
| C2H4g28763 | 4:19,961,059-19,964,465 | - | C1H4g09561 | CX4g036538 | LOC_Os04g38950 | Os04g0463500 | TDD1, OASB1 | Detail |
| C2H4g00604 | 4:19,967,876-19,968,541 | - | - | - | - | - | - | Detail |
| C2H4g28177 | 4:19,968,988-19,971,300 | + | C1H4g11967 | CX4g033159 | LOC_Os04g38960 | Os04g0463600 | - | Detail |
| C2H4g13162 | 4:19,972,065-19,975,302 | - | C1H4g05080 | CX4g033067 | LOC_Os04g38970 | Os04g0463700 | - | Detail |
| C2H4g07932 | 4:19,980,354-19,982,657 | - | C1H4g02516 | CX4g036672 | LOC_Os04g38980 | Os04g0463800 | - | Detail |
| C2H4g12038 | 4:19,988,639-19,988,998 | + | C1H4g30641 | CX4g031871 | LOC_Os04g39010 | Os04g0464100 | - | Detail |
| C2H4g13985 | 4:19,998,440-20,003,172 | - | C1H4g01794 | CX4g032487 | LOC_Os04g39020 | Os04g0464200 | BAD1, Badh1, badh1, BAD1, BADH1, OsBADH1, BADH | Detail |
| C2H4g00984 | 4:20,005,937-20,009,902 | - | C1H4g07451 | CX4g035491 | LOC_Os04g39030 | Os04g0464400 | - | Detail |
| C2H4g04170 | 4:20,012,720-20,017,590 | + | C1H4g23214 | CX4g031502 | LOC_Os04g39040 | Os04g0464500 | - | Detail |
| C2H4g17001 | 4:20,018,221-20,019,219 | + | - | CX4g036018 | LOC_Os04g39050 | Os04g0464600 | - | Detail |
| C2H4g17707 | 4:20,020,772-20,021,056 | - | C1H4g17346 | - | - | - | - | Detail |
| C2H4g26653 | 4:20,027,874-20,028,167 | - | C1H4g20578 | CX4g036034 | - | - | - | Detail |
| C2H4g00542 | 4:20,040,523-20,046,626 | - | C1H4g22118 | CX4g035608 | LOC_Os04g39060 | Os04g0464800 | OsCFM2 | Detail |
| C2H4g07256 | 4:20,051,032-20,051,685 | - | C1H4g16307 | - | - | Os07g0567801 | - | Detail |
| C2H4g28234 | 4:20,056,175-20,058,216 | - | C1H4g29554 | CX4g032500 | LOC_Os04g39080 | Os04g0464966 | OsFbox217, Os_F0121, MOF | Detail |
| C2H4g22620 | 4:20,058,960-20,065,196 | + | C1H4g24682 | CX4g036673 | LOC_Os04g39090 | Os04g0465000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |