| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02942 | 1:30,031,566-30,034,970 | + | C2H1g13385 | CX1g000031 | LOC_Os01g58240 | Os01g0794800 | - | Detail |
| C1H1g25833 | 1:30,032,232-30,036,904 | - | C2H1g21351 | - | - | - | - | Detail |
| C1H1g25653 | 1:30,039,800-30,047,154 | + | C2H1g29117 | CX1g000031 | LOC_Os01g58240 | Os01g0795000 | RSP1 | Detail |
| C1H1g21214 | 1:30,049,868-30,054,395 | + | C2H1g27055 | CX1g000031 | LOC_Os01g58270 | Os01g0795100 | - | Detail |
| C1H1g12866 | 1:30,057,062-30,057,763 | - | - | - | - | - | - | Detail |
| C1H1g23689 | 1:30,059,471-30,062,823 | + | C2H1g17970 | CX1g000031 | LOC_Os01g58280 | Os01g0795200 | - | Detail |
| C1H1g13842 | 1:30,066,199-30,070,778 | + | C2H1g21575 | CX1g000031 | LOC_Os01g58290 | Os01g0795400 | Hwi2 | Detail |
| C1H1g19856 | 1:30,072,039-30,072,287 | + | C2H1g04222 | - | LOC_Os01g58310 | Os01g0795600 | - | Detail |
| C1H1g00284 | 1:30,073,389-30,073,613 | + | C2H1g14294 | - | LOC_Os01g58340 | Os01g0795900 | - | Detail |
| C1H1g24727 | 1:30,080,859-30,081,098 | + | C2H1g04222 | - | LOC_Os01g58310 | Os01g0795900 | - | Detail |
| C1H1g15205 | 1:30,092,878-30,095,404 | + | C2H1g23146 | CX1g003893 | LOC_Os01g58380 | Os01g0796400 | - | Detail |
| C1H1g14537 | 1:30,095,888-30,097,988 | - | C2H1g07599 | CX1g005123 | LOC_Os01g58390 | Os01g0796500 | - | Detail |
| C1H1g28486 | 1:30,101,988-30,106,936 | - | C2H1g05560 | CX1g003555 | LOC_Os01g58400 | Os01g0796700 | - | Detail |
| C1H1g15191 | 1:30,109,637-30,110,248 | - | C2H1g00808 | - | - | - | - | Detail |
| C1H1g16633 | 1:30,118,323-30,118,856 | + | - | CX1g006863 | - | - | - | Detail |
| C1H1g08851 | 1:30,124,810-30,125,520 | + | C2H1g04740 | CX1g004754 | LOC_Os01g58420 | Os01g0797600 | ERF3, AP37, OsAP37, OsERF3, OsERF#075, OsERF075, OsERF75, ERF75, AP2/EREBP#004, AP2/EREBP4, OsBIERF2, BIERF2 | Detail |
| C1H1g04740 | 1:30,146,507-30,150,478 | + | C2H1g19057 | CX1g002330 | LOC_Os01g58470 | Os01g0798500 | OsY3IP1 | Detail |
| C1H1g24753 | 1:30,154,872-30,157,273 | - | C2H1g16159 | CX1g001040 | LOC_Os01g58500 | Os01g0798800 | - | Detail |
| C1H1g14458 | 1:30,157,504-30,158,697 | + | C2H1g05286 | CX1g005010 | LOC_Os01g58510 | Os01g0798900 | - | Detail |
| C1H1g21828 | 1:30,158,951-30,160,834 | - | C2H1g30085 | CX1g006206 | LOC_Os01g58520 | Os01g0799000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H7g02938 | 7:12,912,079-12,915,178 | - | C1H7g16744 | CX7g046202 | LOC_Os07g26730 | Os07g0273900 | - | Detail |
| C2H7g19223 | 7:12,923,994-12,925,996 | + | C1H7g28266 | CX7g049510 | LOC_Os07g26740 | Os07g0523100 | - | Detail |
| C2H7g27915 | 7:12,941,298-12,943,762 | + | C1H11g02491 | CX7g046127 | - | - | - | Detail |
| C2H7g10439 | 7:13,016,698-13,018,251 | + | C1H7g22365 | CX7g047342 | LOC_Os07g26870 | Os07g0451300 | - | Detail |
| C2H7g29545 | 7:13,032,545-13,034,846 | + | C1H7g00534 | CX7g047774 | LOC_Os07g26870 | Os07g0451300 | - | Detail |
| C2H7g21721 | 7:13,039,047-13,043,215 | + | C1H7g04565 | CX7g047554 | LOC_Os07g26900 | Os07g0452100 | - | Detail |
| C2H7g10448 | 7:13,048,456-13,054,883 | + | C1H7g17151 | CX7g046832 | LOC_Os07g26920 | Os07g0452400 | - | Detail |
| C2H7g28483 | 7:13,057,017-13,059,096 | - | C1H7g09551 | CX7g049661 | LOC_Os07g26940 | Os07g0452500 | - | Detail |
| C2H7g00694 | 7:13,066,166-13,068,545 | + | C1H7g14083 | CX7g047726 | LOC_Os07g26960 | Os07g0452600 | - | Detail |
| C2H7g23804 | 7:13,074,140-13,074,450 | - | C1H7g17102 | CX7g047550 | LOC_Os07g26974 | - | - | Detail |
| C2H7g20635 | 7:13,077,730-13,079,611 | + | - | - | - | Os07g0452950 | - | Detail |
| C2H7g08603 | 7:13,100,181-13,101,606 | - | C1H7g18343 | CX7g046385 | LOC_Os07g27030 | Os07g0189400 | - | Detail |
| C2H7g06085 | 7:13,114,997-13,120,146 | + | C1H7g29596 | CX7g046982 | LOC_Os07g27110 | Os07g0454100 | - | Detail |
| C2H7g24705 | 7:13,126,764-13,128,425 | + | C1H7g14601 | CX7g048502 | LOC_Os07g27150 | Os07g0454700 | - | Detail |
| C2H7g08619 | 7:13,129,641-13,148,232 | - | C1H7g27526 | CX7g048690 | LOC_Os07g27180 | Os07g0455100 | S7 | Detail |
| C2H7g00302 | 7:13,179,429-13,183,355 | - | C1H9g21016 | CX7g046725 | - | - | - | Detail |
| C2H7g01276 | 7:13,194,988-13,195,693 | + | C1H7g24572 | CX7g047125 | - | - | - | Detail |
| C2H7g18766 | 7:13,197,422-13,201,306 | - | C1H7g23178 | CX7g050421 | LOC_Os07g27300 | Os07g0456400 | - | Detail |
| C2H7g06004 | 7:13,203,626-13,207,197 | - | C1H7g23311 | CX7g048721 | LOC_Os07g27310 | Os07g0456500 | OsSEC14-19 | Detail |
| C2H7g14697 | 7:13,213,302-13,218,769 | + | C1H7g08421 | CX7g048784 | LOC_Os07g27320 | Os07g0456700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |