| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g24723 | 9:4,947,146-4,947,657 | - | C2H9g26174 | CX9g057777 | LOC_Os09g10270 | Os09g0274800 | - | Detail |
| C1H9g26738 | 9:4,951,772-4,951,987 | - | - | - | - | - | - | Detail |
| C1H9g11872 | 9:5,014,138-5,014,836 | + | C2H9g16592 | CX9g056504 | LOC_Os09g10274 | Os09g0274900 | - | Detail |
| C1H9g02625 | 9:5,055,377-5,058,017 | + | C2H9g23535 | CX9g056236 | LOC_Os09g10330 | Os09g0275300 | - | Detail |
| C1H9g24102 | 9:5,068,365-5,071,476 | + | - | - | - | - | - | Detail |
| C1H9g11736 | 9:5,078,613-5,080,694 | - | C2H9g25792 | CX9g056135 | LOC_Os09g10340 | Os09g0275400 | - | Detail |
| C1H9g29336 | 9:5,092,238-5,093,916 | - | - | - | LOC_Os09g10360 | - | - | Detail |
| C1H9g30758 | 9:5,123,491-5,129,965 | - | - | - | - | - | - | Detail |
| C1H9g00786 | 9:5,161,042-5,165,113 | + | C2H9g28983 | CX9g055062 | LOC_Os09g10600 | Os09g0277800 | - | Detail |
| C1H9g21981 | 9:5,167,087-5,167,668 | + | C2H9g06132 | CX9g057594 | LOC_Os09g10620 | Os09g0278000 | - | Detail |
| C1H9g21232 | 9:5,176,109-5,176,710 | - | C2H9g09346 | CX9g056263 | - | Os09g0278300 | - | Detail |
| C1H9g17534 | 9:5,177,121-5,183,797 | - | C2H9g03725 | CX9g056263 | LOC_Os09g10650 | Os09g0278300 | - | Detail |
| C1H9g24436 | 9:5,220,684-5,226,555 | - | C2H9g27425 | CX9g055877 | LOC_Os09g10710 | Os09g0279000 | - | Detail |
| C1H9g25806 | 9:5,230,270-5,234,443 | - | C2H9g24351 | CX9g056801 | LOC_Os09g10720 | Os09g0279100 | - | Detail |
| C1H9g31209 | 9:5,246,752-5,247,986 | + | C2H9g04697 | CX9g056728 | LOC_Os09g10740 | Os09g0279300 | - | Detail |
| C1H9g00624 | 9:5,249,229-5,253,313 | + | C2H9g22785 | CX9g056856 | LOC_Os09g10750 | Os09g0279400 | - | Detail |
| C1H9g19154 | 9:5,253,808-5,255,985 | - | C2H9g28965 | CX9g056745 | LOC_Os09g10760 | Os09g0279500 | - | Detail |
| C1H9g13367 | 9:5,256,267-5,257,340 | - | C2H9g06839 | - | - | - | - | Detail |
| C1H9g10042 | 9:5,258,416-5,266,623 | + | C2H9g17273 | CX9g057832 | LOC_Os09g10770 | Os09g0279600 | TOP6B | Detail |
| C1H9g19087 | 9:5,271,191-5,275,620 | + | C2H9g14875 | CX9g056264 | LOC_Os09g10820 | Os09g0280300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g08417 | 2:2,303,926-2,311,206 | + | C1H2g01626 | CX2g022091 | LOC_Os02g05040 | Os02g0143200 | - | Detail |
| C2H2g29044 | 2:2,326,035-2,331,705 | + | C1H2g20326 | - | - | - | - | Detail |
| C2H2g15830 | 2:2,331,756-2,337,013 | + | C1H2g05324 | CX2g020466 | LOC_Os02g05310 | Os02g0146400 | - | Detail |
| C2H2g06566 | 2:2,337,342-2,342,078 | + | C1H2g12282 | CX2g020302 | LOC_Os02g05320 | Os02g0146500 | - | Detail |
| C2H2g08642 | 2:2,344,474-2,347,835 | + | C1H2g18676 | CX2g020037 | LOC_Os02g05330 | Os02g0146600 | OseIF4A | Detail |
| C2H2g07340 | 2:2,351,364-2,359,090 | + | C1H2g28134 | CX2g019608 | LOC_Os02g05340 | Os02g0146700 | - | Detail |
| C2H2g09483 | 2:2,361,124-2,361,397 | + | - | - | - | - | - | Detail |
| C2H2g18915 | 2:2,361,453-2,365,801 | + | C1H2g16834 | CX2g022971 | LOC_Os02g05365 | Os02g0147700 | - | Detail |
| C2H2g16746 | 2:2,367,495-2,373,379 | + | C1H2g17406 | CX2g021512 | LOC_Os02g05450 | Os02g0147800 | - | Detail |
| C2H2g05031 | 2:2,385,281-2,388,231 | + | C1H2g03103 | CX2g019418 | LOC_Os02g05470 | Os02g0148000 | - | Detail |
| C2H2g17640 | 2:2,389,987-2,393,274 | - | C1H2g11400 | CX2g020633 | LOC_Os02g05480 | Os02g0148100 | OsMAPK14, OsMPK3, OsMAPK33 | Detail |
| C2H2g26711 | 2:2,398,964-2,409,479 | + | C1H2g29322 | CX2g019230 | LOC_Os02g05490 | Os02g0148300 | - | Detail |
| C2H2g18156 | 2:2,410,020-2,412,843 | + | C1H2g28836 | CX2g021446 | LOC_Os02g05500 | Os02g0148400 | - | Detail |
| C2H2g30595 | 2:2,414,221-2,417,726 | + | C1H2g30011 | CX2g024552 | LOC_Os02g05510 | Os02g0148500 | - | Detail |
| C2H2g05427 | 2:2,418,499-2,420,814 | + | C1H2g12590 | CX2g023405 | LOC_Os02g05520 | Os02g0148600 | - | Detail |
| C2H2g26407 | 2:2,427,921-2,428,679 | + | C1H2g04797 | CX2g022702 | LOC_Os02g05600 | Os02g0149500 | - | Detail |
| C2H2g19048 | 2:2,434,730-2,439,152 | + | C1H2g28291 | CX2g024920 | LOC_Os02g05610 | Os02g0149600 | - | Detail |
| C2H2g28510 | 2:2,449,680-2,452,843 | + | C1H2g12792 | CX2g021786 | LOC_Os02g05630 | Os02g0149800 | OsPP2C10, PP2C10, OsPP18 | Detail |
| C2H2g30382 | 2:2,464,142-2,465,378 | + | C1H2g24221 | CX2g022836 | LOC_Os02g05640 | Os02g0149900 | - | Detail |
| C2H2g12819 | 2:2,467,140-2,469,636 | - | C1H2g30137 | CX2g019305 | LOC_Os02g05650 | Os02g0150000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g002198 | 1:20,359-27,433 | + | C1H1g02341 | C2H1g13015 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| CX1g006968 | 1:28,401-28,688 | - | - | - | - | - | - | Detail |
| CX1g002858 | 1:35,206-37,909 | + | C1H1g23301 | C2H1g25732 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| CX1g003623 | 1:39,279-42,277 | + | C1H1g05541 | C2H1g24136 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| CX1g003961 | 1:59,306-64,835 | + | C1H1g26676 | C2H1g12741 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| CX1g005152 | 1:68,312-70,732 | + | C1H1g29605 | C2H1g30020 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| CX1g004895 | 1:71,762-72,834 | + | C1H1g29605 | C2H1g12698 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| CX1g005861 | 1:73,330-76,018 | - | C1H1g15874 | C2H1g01369 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| CX1g001476 | 1:79,873-83,977 | + | C1H1g31238 | C2H1g16597 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| CX1g002150 | 1:89,271-90,681 | + | C1H1g30351 | C2H1g26722 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| CX1g000559 | 1:93,798-96,636 | + | C1H1g07147 | C2H1g16862 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| CX1g003279 | 1:97,381-97,599 | - | - | C2H1g08637 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| CX1g002179 | 1:98,254-99,849 | - | - | C2H1g21658 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| CX1g004841 | 1:104,203-105,156 | + | C1H1g23624 | C2H1g21224 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| CX1g005639 | 1:108,600-109,925 | + | C1H1g19237 | C2H1g12981 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| CX1g005627 | 1:110,517-112,372 | + | C1H1g02228 | C2H1g13148 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| CX1g006384 | 1:114,118-116,036 | + | C1H1g19000 | C2H1g25133 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| CX1g001371 | 1:116,588-118,780 | + | C1H1g20467 | C2H1g01047 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| CX1g006904 | 1:119,883-124,648 | + | C1H1g21121 | C2H1g05282 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| CX1g005388 | 1:125,436-125,612 | + | - | - | - | - | - | Detail |